RNA–Protein interactions for RNA: ENST00000496441.5

CDCA7-208, Transcript of cell division cycle associated 7, humanhuman

TSL 2

Gene CDCA7, Length 2,943 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA7-208ENST00000496441 KRTAP4-3Q9BYR4 195 aa3.95□□□□□ -1.78
CDCA7-208ENST00000496441 CRCT1Q9UGL9 99 aa3.92□□□□□ -1.78
CDCA7-208ENST00000496441 LOC100996750A0A140TA64 210 aa3.91□□□□□ -1.78
CDCA7-208ENST00000496441 MACF1Q9UPN3 7388 aaKnown RBP3.9□□□□□ -1.78
CDCA7-208ENST00000496441 SYNE2Q8WXH0 6885 aaKnown RBP3.87□□□□□ -1.79
CDCA7-208ENST00000496441 MT1GP13640 62 aa3.85□□□□□ -1.79
CDCA7-208ENST00000496441 INE1O15225 51 aa3.84□□□□□ -1.79
CDCA7-208ENST00000496441 SPRR2FQ96RM1 72 aa3.81□□□□□ -1.8
CDCA7-208ENST00000496441 KRTAP2-3P0C7H8 128 aa3.77□□□□□ -1.81
CDCA7-208ENST00000496441 KRTAP19-3Q7Z4W3 81 aa3.77□□□□□ -1.81
CDCA7-208ENST00000496441 KRTAP2-4Q9BYR9 128 aa3.77□□□□□ -1.81
CDCA7-208ENST00000496441 KRTAP2-1Q9BYU5 128 aa3.77□□□□□ -1.81
CDCA7-208ENST00000496441 MT1MQ8N339 61 aa3.76□□□□□ -1.81
CDCA7-208ENST00000496441 MDN1Q9NU22 5596 aa3.74□□□□□ -1.81
CDCA7-208ENST00000496441 SYNE1Q8NF91 8797 aaKnown RBP3.74□□□□□ -1.81
CDCA7-208ENST00000496441 KRTAP19-4Q3LI73 84 aa3.69□□□□□ -1.82
CDCA7-208ENST00000496441 KRTAP9-2Q9BYQ4 174 aa3.64□□□□□ -1.83
CDCA7-208ENST00000496441 KRTAP9-6A0A140TA67 174 aa3.63□□□□□ -1.83
CDCA7-208ENST00000496441 LCE5AQ5TCM9 118 aa3.63□□□□□ -1.83
CDCA7-208ENST00000496441 OBSCNQ5VST9 7968 aa3.62□□□□□ -1.83
CDCA7-208ENST00000496441 LCE3BQ5TA77 95 aa3.57□□□□□ -1.84
CDCA7-208ENST00000496441 KRTAP4-6Q9BYQ5 205 aa3.57□□□□□ -1.84
CDCA7-208ENST00000496441 KRTAP4-9Q9BYQ8 210 aa3.52□□□□□ -1.85
CDCA7-208ENST00000496441 KRTAP12-4P60329 112 aa3.46□□□□□ -1.86
CDCA7-208ENST00000496441 LCE1AQ5T7P2 110 aa3.46□□□□□ -1.86
CDCA7-208ENST00000496441 SPRR2EP22531 72 aa3.46□□□□□ -1.86
CDCA7-208ENST00000496441 SPRR2BP35325 72 aa3.46□□□□□ -1.86
CDCA7-208ENST00000496441 SPRR2AP35326 72 aa3.46□□□□□ -1.86
CDCA7-208ENST00000496441 KRTAP6-1Q3LI64 71 aa3.45□□□□□ -1.86
CDCA7-208ENST00000496441 KRTAP5-9P26371 169 aa3.37□□□□□ -1.87
CDCA7-208ENST00000496441 MT1AP04731 61 aa3.31□□□□□ -1.88
CDCA7-208ENST00000496441 SPRR2DP22532 72 aa3.3□□□□□ -1.88
CDCA7-208ENST00000496441 KRTAP5-5Q701N2 237 aaPredicted RBP3.25□□□□□ -1.89
CDCA7-208ENST00000496441 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.24□□□□□ -1.89
CDCA7-208ENST00000496441 LCE3DQ9BYE3 92 aa3.24□□□□□ -1.89
CDCA7-208ENST00000496441 KRTAP9-7A8MTY7 169 aa3.21□□□□□ -1.9
CDCA7-208ENST00000496441 KRTAP6-3Q3LI67 103 aa3.17□□□□□ -1.9
CDCA7-208ENST00000496441 LCE3EQ5T5B0 92 aa3.16□□□□□ -1.9
CDCA7-208ENST00000496441 KRTAP9-4Q9BYQ2 154 aa3.14□□□□□ -1.91
CDCA7-208ENST00000496441 KRTAP6-2Q3LI66 62 aa3.13□□□□□ -1.91
CDCA7-208ENST00000496441 PRM1P04553 51 aa3.06□□□□□ -1.92
CDCA7-208ENST00000496441 KRTAP4-12Q9BQ66 201 aa3.04□□□□□ -1.92
CDCA7-208ENST00000496441 KRTAP9-9Q9BYP9 154 aa3.03□□□□□ -1.92
CDCA7-208ENST00000496441 MT4P47944 62 aa3.01□□□□□ -1.93
CDCA7-208ENST00000496441 MT3P25713 68 aa3.01□□□□□ -1.93
CDCA7-208ENST00000496441 NEBP20929 6669 aa3□□□□□ -1.93
CDCA7-208ENST00000496441 KRTAP20-1Q3LI63 56 aa2.88□□□□□ -1.95
CDCA7-208ENST00000496441 LCE1DQ5T752 114 aa2.88□□□□□ -1.95
CDCA7-208ENST00000496441 KRTAP5-4Q6L8H1 288 aa2.87□□□□□ -1.95
CDCA7-208ENST00000496441 HMCN1Q96RW7 5635 aa2.86□□□□□ -1.95
CDCA7-208ENST00000496441 KRTAP20-2Q3LI61 65 aa2.79□□□□□ -1.96
CDCA7-208ENST00000496441 KRTAP4-2Q9BYR5 136 aa2.78□□□□□ -1.96
CDCA7-208ENST00000496441 KRTAP2-2Q9BYT5 123 aa2.74□□□□□ -1.97
CDCA7-208ENST00000496441 LCE4AQ5TA78 99 aa2.72□□□□□ -1.97
CDCA7-208ENST00000496441 KRTAP4-11Q9BYQ6 195 aa2.69□□□□□ -1.98
CDCA7-208ENST00000496441 KRTAP5-2Q701N4 177 aa2.65□□□□□ -1.98
CDCA7-208ENST00000496441 MUC5ACP98088 5654 aa2.61□□□□□ -1.99
CDCA7-208ENST00000496441 LCE1BQ5T7P3 118 aa2.61□□□□□ -1.99
CDCA7-208ENST00000496441 KRTAP5-3Q6L8H2 238 aa2.6□□□□□ -1.99
CDCA7-208ENST00000496441 LCE1FQ5T754 118 aa2.56□□□□□ -2
CDCA7-208ENST00000496441 LCE1EQ5T753 118 aa2.44□□□□□ -2.02
CDCA7-208ENST00000496441 KRTAP5-10Q6L8G5 202 aa2.33□□□□□ -2.04
CDCA7-208ENST00000496441 KRTAP5-7Q6L8G8 165 aa2.33□□□□□ -2.04
CDCA7-208ENST00000496441 KRTAP5-1Q6L8H4 278 aa2.33□□□□□ -2.04
CDCA7-208ENST00000496441 GPR98Q8WXG9 6306 aa2.3□□□□□ -2.04
CDCA7-208ENST00000496441 LCE1CQ5T751 118 aa2.28□□□□□ -2.04
CDCA7-208ENST00000496441 AHNAK2Q8IVF2 5795 aa2.27□□□□□ -2.05
CDCA7-208ENST00000496441 MUC19Q7Z5P9 8384 aa2.26□□□□□ -2.05
CDCA7-208ENST00000496441 MUC5BQ9HC84 5762 aaPredicted RBP2.23□□□□□ -2.05
CDCA7-208ENST00000496441 KRTAP5-8O75690 187 aa2.21□□□□□ -2.06
CDCA7-208ENST00000496441 KRTAP4-4Q9BYR3 166 aa2.19□□□□□ -2.06
CDCA7-208ENST00000496441 KRTAP21-2Q3LI59 83 aa2.18□□□□□ -2.06
CDCA7-208ENST00000496441 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.07□□□□□ -2.08
CDCA7-208ENST00000496441 AHNAKQ09666 5890 aaKnown RBP2.06□□□□□ -2.08
CDCA7-208ENST00000496441 KRTAP5-11Q6L8G4 156 aa1.95□□□□□ -2.1
CDCA7-208ENST00000496441 KRTAP21-1Q3LI58 79 aa1.79□□□□□ -2.12
CDCA7-208ENST00000496441 PHGR1C9JFL3 82 aa1.72□□□□□ -2.13
CDCA7-208ENST00000496441 MUC16Q8WXI7 14507 aa1.11□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 99.2 ms