RNA–Protein interactions for RNA: ENST00000496335.1

PDAP1-204, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 302 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-204ENST00000496335 KRTAP4-9Q9BYQ8 210 aa5.07□□□□□ -1.6
PDAP1-204ENST00000496335 KRTAP4-3Q9BYR4 195 aa5.05□□□□□ -1.6
PDAP1-204ENST00000496335 PSPHP1O15172 72 aa5.03□□□□□ -1.6
PDAP1-204ENST00000496335 KRTAP12-3P60328 96 aa5□□□□□ -1.61
PDAP1-204ENST00000496335 V9GYY9 64 aa4.99□□□□□ -1.61
PDAP1-204ENST00000496335 Q1T7F1 81 aa4.98□□□□□ -1.61
PDAP1-204ENST00000496335 K7ERS5 55 aa4.95□□□□□ -1.62
PDAP1-204ENST00000496335 KRTAP25-1Q3LHN0 102 aa4.95□□□□□ -1.62
PDAP1-204ENST00000496335 LCE1DQ5T752 114 aa4.95□□□□□ -1.62
PDAP1-204ENST00000496335 KRTAP4-7Q9BYR0 210 aa4.95□□□□□ -1.62
PDAP1-204ENST00000496335 LCE4AQ5TA78 99 aa4.92□□□□□ -1.62
PDAP1-204ENST00000496335 HMCN1Q96RW7 5635 aa4.91□□□□□ -1.62
PDAP1-204ENST00000496335 GPR98Q8WXG9 6306 aa4.91□□□□□ -1.62
PDAP1-204ENST00000496335 MT4P47944 62 aa4.9□□□□□ -1.63
PDAP1-204ENST00000496335 KRTAP5-4Q6L8H1 288 aa4.85□□□□□ -1.63
PDAP1-204ENST00000496335 A6NED7 52 aa4.84□□□□□ -1.63
PDAP1-204ENST00000496335 KRTAP4-6Q9BYQ5 205 aa4.78□□□□□ -1.64
PDAP1-204ENST00000496335 AHNAK2Q8IVF2 5795 aa4.74□□□□□ -1.65
PDAP1-204ENST00000496335 KRTAP23-1A1A580 65 aa4.74□□□□□ -1.65
PDAP1-204ENST00000496335 RPS28P62857 69 aaKnown RBP4.73□□□□□ -1.65
PDAP1-204ENST00000496335 PCP4P48539 62 aa4.71□□□□□ -1.66
PDAP1-204ENST00000496335 CDC42SE1Q9NRR8 79 aa4.7□□□□□ -1.66
PDAP1-204ENST00000496335 KRTAP15-1Q3LI76 137 aa4.69□□□□□ -1.66
PDAP1-204ENST00000496335 KRTAP5-5Q701N2 237 aaPredicted RBP4.69□□□□□ -1.66
PDAP1-204ENST00000496335 LOC100996750A0A140TA64 210 aa4.68□□□□□ -1.66
PDAP1-204ENST00000496335 KRTAP19-4Q3LI73 84 aa4.66□□□□□ -1.66
PDAP1-204ENST00000496335 ROMO1P60602 79 aa4.64□□□□□ -1.67
PDAP1-204ENST00000496335 LCE3CQ5T5A8 94 aa4.62□□□□□ -1.67
PDAP1-204ENST00000496335 KRTAP20-2Q3LI61 65 aa4.59□□□□□ -1.67
PDAP1-204ENST00000496335 SPRR5A0A1B0GTR4 108 aa4.55□□□□□ -1.68
PDAP1-204ENST00000496335 KRTAP5-10Q6L8G5 202 aa4.55□□□□□ -1.68
PDAP1-204ENST00000496335 KRTAP12-4P60329 112 aa4.54□□□□□ -1.68
PDAP1-204ENST00000496335 SYNE1Q8NF91 8797 aaKnown RBP4.52□□□□□ -1.69
PDAP1-204ENST00000496335 KRTAP5-3Q6L8H2 238 aa4.47□□□□□ -1.69
PDAP1-204ENST00000496335 KRTAP9-6A8MVA2 160 aa4.39□□□□□ -1.71
PDAP1-204ENST00000496335 MT1AP04731 61 aa4.38□□□□□ -1.71
PDAP1-204ENST00000496335 KRTAP6-1Q3LI64 71 aa4.38□□□□□ -1.71
PDAP1-204ENST00000496335 KRTAP5-7Q6L8G8 165 aa4.36□□□□□ -1.71
PDAP1-204ENST00000496335 KRTAP5-2Q701N4 177 aa4.26□□□□□ -1.73
PDAP1-204ENST00000496335 KRTAP9-4Q9BYQ2 154 aa4.23□□□□□ -1.73
PDAP1-204ENST00000496335 KRTAP4-11Q9BYQ6 195 aa4.18□□□□□ -1.74
PDAP1-204ENST00000496335 KRTAP6-2Q3LI66 62 aa4.17□□□□□ -1.74
PDAP1-204ENST00000496335 BRK1Q8WUW1 75 aa4.17□□□□□ -1.74
PDAP1-204ENST00000496335 OBSCNQ5VST9 7968 aa4.04□□□□□ -1.76
PDAP1-204ENST00000496335 KRTAP5-8O75690 187 aa4.04□□□□□ -1.76
PDAP1-204ENST00000496335 MT3P25713 68 aa4□□□□□ -1.77
PDAP1-204ENST00000496335 PMAIP1Q13794 54 aa3.92□□□□□ -1.78
PDAP1-204ENST00000496335 AHNAKQ09666 5890 aaKnown RBP3.91□□□□□ -1.78
PDAP1-204ENST00000496335 MUC5BQ9HC84 5762 aaPredicted RBP3.89□□□□□ -1.79
PDAP1-204ENST00000496335 MUC5ACP98088 5654 aa3.86□□□□□ -1.79
PDAP1-204ENST00000496335 KRTAP5-1Q6L8H4 278 aa3.82□□□□□ -1.8
PDAP1-204ENST00000496335 PRAC1Q96KF2 57 aa3.82□□□□□ -1.8
PDAP1-204ENST00000496335 KRTAP9-9Q9BYP9 154 aa3.81□□□□□ -1.8
PDAP1-204ENST00000496335 LCE1EQ5T753 118 aa3.65□□□□□ -1.83
PDAP1-204ENST00000496335 PRO0628Q9UI54 55 aa3.6□□□□□ -1.83
PDAP1-204ENST00000496335 LCE1BQ5T7P3 118 aa3.48□□□□□ -1.85
PDAP1-204ENST00000496335 KRTAP4-2Q9BYR5 136 aa3.47□□□□□ -1.85
PDAP1-204ENST00000496335 KTN1-AS1Q86SY8 53 aa3.45□□□□□ -1.86
PDAP1-204ENST00000496335 LCE1CQ5T751 118 aa3.39□□□□□ -1.87
PDAP1-204ENST00000496335 SVIPQ8NHG7 77 aa3.34□□□□□ -1.87
PDAP1-204ENST00000496335 LCE3DQ9BYE3 92 aa3.33□□□□□ -1.88
PDAP1-204ENST00000496335 KRTAP4-12Q9BQ66 201 aa3.17□□□□□ -1.9
PDAP1-204ENST00000496335 LUZP6Q538Z0 58 aa3.16□□□□□ -1.9
PDAP1-204ENST00000496335 LCE3EQ5T5B0 92 aa3.14□□□□□ -1.91
PDAP1-204ENST00000496335 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.08□□□□□ -1.92
PDAP1-204ENST00000496335 KRTAP5-11Q6L8G4 156 aa3.07□□□□□ -1.92
PDAP1-204ENST00000496335 LCE1FQ5T754 118 aa2.96□□□□□ -1.94
PDAP1-204ENST00000496335 KRTAP21-2Q3LI59 83 aa2.87□□□□□ -1.95
PDAP1-204ENST00000496335 PHGR1C9JFL3 82 aa2.66□□□□□ -1.98
PDAP1-204ENST00000496335 KRTAP4-4Q9BYR3 166 aa2.66□□□□□ -1.98
PDAP1-204ENST00000496335 NDUFAF8A1L188 74 aa2.55□□□□□ -2
PDAP1-204ENST00000496335 MUC19Q7Z5P9 8384 aa2.47□□□□□ -2.01
PDAP1-204ENST00000496335 PRM1P04553 51 aa2.39□□□□□ -2.03
PDAP1-204ENST00000496335 INE1O15225 51 aa1.99□□□□□ -2.09
PDAP1-204ENST00000496335 KRTAP21-1Q3LI58 79 aa1.99□□□□□ -2.09
PDAP1-204ENST00000496335 A0A0A0MQY5 61 aa1.94□□□□□ -2.1
PDAP1-204ENST00000496335 MUC16Q8WXI7 14507 aa1.77□□□□□ -2.13
PDAP1-204ENST00000496335 H3BS24 57 aa0.75□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 6.9 ms