RNA–Protein interactions for RNA: ENST00000495071.6

SUPT20H-222, Transcript of SPT20 homolog, SAGA complex component, human

TSL 5

Gene SUPT20H, Length 3,669 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT20H-222	ENST00000495071	CRCT1	Q9UGL9	99 aa		4.43	□□□□□ -1.7
SUPT20H-222	ENST00000495071	KRTAP4-3	Q9BYR4	195 aa		4.41	□□□□□ -1.7
SUPT20H-222	ENST00000495071	LOC100996750	A0A140TA64	210 aa		4.4	□□□□□ -1.7
SUPT20H-222	ENST00000495071	MT1G	P13640	62 aa		4.39	□□□□□ -1.71
SUPT20H-222	ENST00000495071	KRTAP19-6	Q3LI70	58 aa		4.39	□□□□□ -1.71
SUPT20H-222	ENST00000495071	MUC12	Q9UKN1	5478 aa		4.32	□□□□□ -1.72
SUPT20H-222	ENST00000495071	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	4.31	□□□□□ -1.72
SUPT20H-222	ENST00000495071	MT1M	Q8N339	61 aa		4.29	□□□□□ -1.72
SUPT20H-222	ENST00000495071	KRTAP19-3	Q7Z4W3	81 aa		4.29	□□□□□ -1.72
SUPT20H-222	ENST00000495071	LCE2D	Q5TA82	110 aa	Predicted RBP	4.28	□□□□□ -1.72
SUPT20H-222	ENST00000495071	DST	Q03001	7570 aa	Known RBP	4.23	□□□□□ -1.73
SUPT20H-222	ENST00000495071	KRTAP12-4	P60329	112 aa		4.19	□□□□□ -1.74
SUPT20H-222	ENST00000495071	SPRR2F	Q96RM1	72 aa		4.19	□□□□□ -1.74
SUPT20H-222	ENST00000495071	LCE3B	Q5TA77	95 aa		4.12	□□□□□ -1.75
SUPT20H-222	ENST00000495071	LCE5A	Q5TCM9	118 aa		4.08	□□□□□ -1.76
SUPT20H-222	ENST00000495071	SYNE1	Q8NF91	8797 aa	Known RBP	4.02	□□□□□ -1.77
SUPT20H-222	ENST00000495071	KRTAP4-9	Q9BYQ8	210 aa		4.02	□□□□□ -1.77
SUPT20H-222	ENST00000495071	MACF1	Q9UPN3	7388 aa	Known RBP	3.97	□□□□□ -1.77
SUPT20H-222	ENST00000495071	KRTAP6-1	Q3LI64	71 aa		3.92	□□□□□ -1.78
SUPT20H-222	ENST00000495071	SYNE2	Q8WXH0	6885 aa	Known RBP	3.91	□□□□□ -1.78
SUPT20H-222	ENST00000495071	LCE3D	Q9BYE3	92 aa		3.88	□□□□□ -1.79
SUPT20H-222	ENST00000495071	MT1A	P04731	61 aa		3.86	□□□□□ -1.79
SUPT20H-222	ENST00000495071	MDN1	Q9NU22	5596 aa		3.85	□□□□□ -1.79
SUPT20H-222	ENST00000495071	LCE3E	Q5T5B0	92 aa		3.82	□□□□□ -1.8
SUPT20H-222	ENST00000495071	KRTAP9-2	Q9BYQ4	174 aa		3.79	□□□□□ -1.8
SUPT20H-222	ENST00000495071	LCE1A	Q5T7P2	110 aa		3.77	□□□□□ -1.81
SUPT20H-222	ENST00000495071	SPRR2E	P22531	72 aa		3.76	□□□□□ -1.81
SUPT20H-222	ENST00000495071	SPRR2B	P35325	72 aa		3.76	□□□□□ -1.81
SUPT20H-222	ENST00000495071	SPRR2A	P35326	72 aa		3.76	□□□□□ -1.81
SUPT20H-222	ENST00000495071	OBSCN	Q5VST9	7968 aa		3.75	□□□□□ -1.81
SUPT20H-222	ENST00000495071	KRTAP9-7	A8MTY7	169 aa		3.75	□□□□□ -1.81
SUPT20H-222	ENST00000495071	KRTAP9-6	A0A140TA67	174 aa		3.73	□□□□□ -1.81
SUPT20H-222	ENST00000495071	PRM1	P04553	51 aa		3.71	□□□□□ -1.82
SUPT20H-222	ENST00000495071	KRTAP5-5	Q701N2	237 aa	Predicted RBP	3.68	□□□□□ -1.82
SUPT20H-222	ENST00000495071	KRTAP5-9	P26371	169 aa		3.65	□□□□□ -1.82
SUPT20H-222	ENST00000495071	KRTAP9-4	Q9BYQ2	154 aa		3.62	□□□□□ -1.83
SUPT20H-222	ENST00000495071	SPRR2D	P22532	72 aa		3.59	□□□□□ -1.84
SUPT20H-222	ENST00000495071	KRTAP6-2	Q3LI66	62 aa		3.56	□□□□□ -1.84
SUPT20H-222	ENST00000495071	MT3	P25713	68 aa		3.51	□□□□□ -1.85
SUPT20H-222	ENST00000495071	KRTAP6-3	Q3LI67	103 aa		3.39	□□□□□ -1.87
SUPT20H-222	ENST00000495071	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	3.34	□□□□□ -1.87
SUPT20H-222	ENST00000495071	KRTAP2-2	Q9BYT5	123 aa		3.23	□□□□□ -1.89
SUPT20H-222	ENST00000495071	MT4	P47944	62 aa		3.22	□□□□□ -1.89
SUPT20H-222	ENST00000495071	KRTAP4-6	Q9BYQ5	205 aa		3.18	□□□□□ -1.9
SUPT20H-222	ENST00000495071	KRTAP5-4	Q6L8H1	288 aa		3.17	□□□□□ -1.9
SUPT20H-222	ENST00000495071	NEB	P20929	6669 aa		3.08	□□□□□ -1.92
SUPT20H-222	ENST00000495071	KRTAP20-2	Q3LI61	65 aa		3.06	□□□□□ -1.92
SUPT20H-222	ENST00000495071	LCE1E	Q5T753	118 aa		3.04	□□□□□ -1.92
SUPT20H-222	ENST00000495071	LCE1D	Q5T752	114 aa		3.01	□□□□□ -1.93
SUPT20H-222	ENST00000495071	LCE4A	Q5TA78	99 aa		3.01	□□□□□ -1.93
SUPT20H-222	ENST00000495071	KRTAP5-2	Q701N4	177 aa		2.98	□□□□□ -1.93
SUPT20H-222	ENST00000495071	HMCN1	Q96RW7	5635 aa		2.95	□□□□□ -1.94
SUPT20H-222	ENST00000495071	MUC5AC	P98088	5654 aa		2.94	□□□□□ -1.94
SUPT20H-222	ENST00000495071	LCE1B	Q5T7P3	118 aa		2.92	□□□□□ -1.94
SUPT20H-222	ENST00000495071	KRTAP20-1	Q3LI63	56 aa		2.89	□□□□□ -1.95
SUPT20H-222	ENST00000495071	KRTAP5-3	Q6L8H2	238 aa		2.84	□□□□□ -1.96
SUPT20H-222	ENST00000495071	KRTAP4-11	Q9BYQ6	195 aa		2.81	□□□□□ -1.96
SUPT20H-222	ENST00000495071	KRTAP5-10	Q6L8G5	202 aa		2.74	□□□□□ -1.97
SUPT20H-222	ENST00000495071	KRTAP5-1	Q6L8H4	278 aa		2.64	□□□□□ -1.99
SUPT20H-222	ENST00000495071	KRTAP4-2	Q9BYR5	136 aa		2.62	□□□□□ -1.99
SUPT20H-222	ENST00000495071	LCE1C	Q5T751	118 aa		2.61	□□□□□ -1.99
SUPT20H-222	ENST00000495071	KRTAP4-12	Q9BQ66	201 aa		2.54	□□□□□ -2
SUPT20H-222	ENST00000495071	KRTAP9-9	Q9BYP9	154 aa		2.54	□□□□□ -2
SUPT20H-222	ENST00000495071	KRTAP21-2	Q3LI59	83 aa		2.48	□□□□□ -2.01
SUPT20H-222	ENST00000495071	MUC19	Q7Z5P9	8384 aa		2.44	□□□□□ -2.02
SUPT20H-222	ENST00000495071	GPR98	Q8WXG9	6306 aa		2.42	□□□□□ -2.02
SUPT20H-222	ENST00000495071	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	2.41	□□□□□ -2.02
SUPT20H-222	ENST00000495071	KRTAP4-4	Q9BYR3	166 aa		2.41	□□□□□ -2.02
SUPT20H-222	ENST00000495071	KRTAP5-7	Q6L8G8	165 aa		2.4	□□□□□ -2.03
SUPT20H-222	ENST00000495071	KRTAP5-8	O75690	187 aa		2.35	□□□□□ -2.03
SUPT20H-222	ENST00000495071	AHNAK2	Q8IVF2	5795 aa		2.33	□□□□□ -2.04
SUPT20H-222	ENST00000495071	LCE1F	Q5T754	118 aa		2.25	□□□□□ -2.05
SUPT20H-222	ENST00000495071	KRTAP21-1	Q3LI58	79 aa		2.24	□□□□□ -2.05
SUPT20H-222	ENST00000495071	MUC5B	Q9HC84	5762 aa	Predicted RBP	2.23	□□□□□ -2.05
SUPT20H-222	ENST00000495071	KRTAP5-11	Q6L8G4	156 aa		2.22	□□□□□ -2.05
SUPT20H-222	ENST00000495071	AHNAK	Q09666	5890 aa	Known RBP	2.12	□□□□□ -2.07
SUPT20H-222	ENST00000495071	PHGR1	C9JFL3	82 aa		1.93	□□□□□ -2.1
SUPT20H-222	ENST00000495071	MUC16	Q8WXI7	14507 aa		1.26	□□□□□ -2.21

Retrieved 78 of 20,778 RNA–protein pairs in 36.5 ms