RNA–Protein interactions for RNA: ENST00000494977.1

FGD4-208, Transcript of FYVE, RhoGEF and PH domain containing 4, humanhuman

TSL 2

Gene FGD4, Length 2,349 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4-208ENST00000494977 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.07□□□□□ -2.08
FGD4-208ENST00000494977 MUC2Q02817 5179 aa2.06□□□□□ -2.08
FGD4-208ENST00000494977 RYR2Q92736 4967 aa2.05□□□□□ -2.08
FGD4-208ENST00000494977 MT1BP07438 61 aa2.04□□□□□ -2.08
FGD4-208ENST00000494977 MT3P25713 68 aa2.03□□□□□ -2.08
FGD4-208ENST00000494977 RYR3Q15413 4870 aa2.01□□□□□ -2.09
FGD4-208ENST00000494977 ABCA13Q86UQ4 5058 aa2.01□□□□□ -2.09
FGD4-208ENST00000494977 GPR98Q8WXG9 6306 aa2.01□□□□□ -2.09
FGD4-208ENST00000494977 UBR4Q5T4S7 5183 aa2□□□□□ -2.09
FGD4-208ENST00000494977 MT1FP04733 61 aa2□□□□□ -2.09
FGD4-208ENST00000494977 PCLOQ9Y6V0 5065 aa2□□□□□ -2.09
FGD4-208ENST00000494977 MT2AP02795 61 aa1.99□□□□□ -2.09
FGD4-208ENST00000494977 PRM1P04553 51 aa1.97□□□□□ -2.09
FGD4-208ENST00000494977 HMCN2Q8NDA2 5059 aa1.97□□□□□ -2.09
FGD4-208ENST00000494977 KRTAP5-9P26371 169 aa1.96□□□□□ -2.1
FGD4-208ENST00000494977 HERC2O95714 4834 aa1.95□□□□□ -2.1
FGD4-208ENST00000494977 BIRC6Q9NR09 4857 aa1.95□□□□□ -2.1
FGD4-208ENST00000494977 LCE1EQ5T753 118 aa1.94□□□□□ -2.1
FGD4-208ENST00000494977 EPPK1P58107 5090 aaKnown RBP1.93□□□□□ -2.1
FGD4-208ENST00000494977 KIAA1109Q2LD37 5005 aa1.9□□□□□ -2.1
FGD4-208ENST00000494977 MT1EP04732 61 aa1.9□□□□□ -2.11
FGD4-208ENST00000494977 MT1HP80294 61 aa1.9□□□□□ -2.11
FGD4-208ENST00000494977 KRTAP19-7Q3SYF9 63 aa1.9□□□□□ -2.11
FGD4-208ENST00000494977 MT1LQ93083 61 aa1.9□□□□□ -2.11
FGD4-208ENST00000494977 MT1AP04731 61 aa1.88□□□□□ -2.11
FGD4-208ENST00000494977 LCE3EQ5T5B0 92 aa1.88□□□□□ -2.11
FGD4-208ENST00000494977 KRTAP5-5Q701N2 237 aaPredicted RBP1.86□□□□□ -2.11
FGD4-208ENST00000494977 LCE3DQ9BYE3 92 aa1.86□□□□□ -2.11
FGD4-208ENST00000494977 KRTAP5-11Q6L8G4 156 aa1.83□□□□□ -2.12
FGD4-208ENST00000494977 MT1GP13640 62 aa1.8□□□□□ -2.12
FGD4-208ENST00000494977 FAT4Q6V0I7 4981 aa1.8□□□□□ -2.12
FGD4-208ENST00000494977 KRTAP5-1Q6L8H4 278 aa1.78□□□□□ -2.12
FGD4-208ENST00000494977 SYNE1Q8NF91 8797 aaKnown RBP1.78□□□□□ -2.12
FGD4-208ENST00000494977 KRTAP5-4Q6L8H1 288 aa1.78□□□□□ -2.13
FGD4-208ENST00000494977 CRCT1Q9UGL9 99 aa1.77□□□□□ -2.13
FGD4-208ENST00000494977 KRTAP4-4Q9BYR3 166 aa1.76□□□□□ -2.13
FGD4-208ENST00000494977 KRTAP6-2Q3LI66 62 aa1.75□□□□□ -2.13
FGD4-208ENST00000494977 KMT2DO14686 5537 aa1.75□□□□□ -2.13
FGD4-208ENST00000494977 RNF213Q63HN8 5207 aa1.74□□□□□ -2.13
FGD4-208ENST00000494977 MUC5BQ9HC84 5762 aaPredicted RBP1.74□□□□□ -2.13
FGD4-208ENST00000494977 KRTAP4-3Q9BYR4 195 aa1.71□□□□□ -2.14
FGD4-208ENST00000494977 SPRR2FQ96RM1 72 aa1.7□□□□□ -2.14
FGD4-208ENST00000494977 MT1MQ8N339 61 aa1.68□□□□□ -2.14
FGD4-208ENST00000494977 AHNAKQ09666 5890 aaKnown RBP1.65□□□□□ -2.14
FGD4-208ENST00000494977 KRTAP19-3Q7Z4W3 81 aa1.63□□□□□ -2.15
FGD4-208ENST00000494977 SPRR2AP35326 72 aa1.62□□□□□ -2.15
FGD4-208ENST00000494977 KRTAP5-8O75690 187 aa1.6□□□□□ -2.15
FGD4-208ENST00000494977 KRTAP6-1Q3LI64 71 aa1.6□□□□□ -2.15
FGD4-208ENST00000494977 KRTAP5-2Q701N4 177 aa1.58□□□□□ -2.16
FGD4-208ENST00000494977 OBSCNQ5VST9 7968 aa1.58□□□□□ -2.16
FGD4-208ENST00000494977 SPRR2DP22532 72 aa1.57□□□□□ -2.16
FGD4-208ENST00000494977 SPRR2BP35325 72 aa1.57□□□□□ -2.16
FGD4-208ENST00000494977 SPRR2EP22531 72 aa1.56□□□□□ -2.16
FGD4-208ENST00000494977 FSIP2Q5CZC0 6907 aa1.53□□□□□ -2.16
FGD4-208ENST00000494977 USH2AO75445 5202 aa1.53□□□□□ -2.16
FGD4-208ENST00000494977 SSPOA2VEC9 5147 aa1.51□□□□□ -2.17
FGD4-208ENST00000494977 FCGBPQ9Y6R7 5405 aaPredicted RBP1.5□□□□□ -2.17
FGD4-208ENST00000494977 NEBP20929 6669 aa1.42□□□□□ -2.18
FGD4-208ENST00000494977 DSTQ03001 7570 aaKnown RBP1.4□□□□□ -2.19
FGD4-208ENST00000494977 MACF1Q9UPN3 7388 aaKnown RBP1.39□□□□□ -2.19
FGD4-208ENST00000494977 MUC12Q9UKN1 5478 aa1.39□□□□□ -2.19
FGD4-208ENST00000494977 KRTAP19-6Q3LI70 58 aa1.37□□□□□ -2.19
FGD4-208ENST00000494977 AHNAK2Q8IVF2 5795 aa1.36□□□□□ -2.19
FGD4-208ENST00000494977 SYNE2Q8WXH0 6885 aaKnown RBP1.34□□□□□ -2.2
FGD4-208ENST00000494977 KRTAP20-1Q3LI63 56 aa1.31□□□□□ -2.2
FGD4-208ENST00000494977 LCE1CQ5T751 118 aa1.31□□□□□ -2.2
FGD4-208ENST00000494977 LCE1BQ5T7P3 118 aa1.31□□□□□ -2.2
FGD4-208ENST00000494977 KRTAP21-1Q3LI58 79 aa1.3□□□□□ -2.2
FGD4-208ENST00000494977 KRTAP5-10Q6L8G5 202 aa1.27□□□□□ -2.21
FGD4-208ENST00000494977 MUC19Q7Z5P9 8384 aa1.26□□□□□ -2.21
FGD4-208ENST00000494977 MDN1Q9NU22 5596 aa1.22□□□□□ -2.21
FGD4-208ENST00000494977 MUC5ACP98088 5654 aa1.19□□□□□ -2.22
FGD4-208ENST00000494977 KRTAP5-7Q6L8G8 165 aa1.16□□□□□ -2.22
FGD4-208ENST00000494977 KRTAP21-2Q3LI59 83 aa1.01□□□□□ -2.25
FGD4-208ENST00000494977 KRTAP20-2Q3LI61 65 aa0.95□□□□□ -2.26
FGD4-208ENST00000494977 MT4P47944 62 aa0.9□□□□□ -2.27
FGD4-208ENST00000494977 PHGR1C9JFL3 82 aa0.69□□□□□ -2.3
FGD4-208ENST00000494977 MUC16Q8WXI7 14507 aa0.64□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 153.9 ms