RNA–Protein interactions for RNA: ENST00000494977.1

FGD4-208, Transcript of FYVE, RhoGEF and PH domain containing 4, humanhuman

TSL 2

Gene FGD4, Length 2,349 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4-208ENST00000494977 AEBP2Q6ZN18 517 aaPredicted RBP11.6□□□□□ -0.55
FGD4-208ENST00000494977 CHIC1Q5VXU3 224 aa11.43□□□□□ -0.58
FGD4-208ENST00000494977 PELP1Q8IZL8 1130 aaKnown RBP11.41□□□□□ -0.58
FGD4-208ENST00000494977 MYT1Q01538 1121 aa11.25□□□□□ -0.61
FGD4-208ENST00000494977 TTBK1Q5TCY1 1321 aaPredicted RBP10.77□□□□□ -0.69
FGD4-208ENST00000494977 HRCP23327 699 aa10.66□□□□□ -0.7
FGD4-208ENST00000494977 SCAF1Q9H7N4 1312 aaKnown RBP10.35□□□□□ -0.75
FGD4-208ENST00000494977 PRKCSHP14314 528 aaPredicted RBP10.24□□□□□ -0.77
FGD4-208ENST00000494977 PPARGC1BQ86YN6 1023 aaKnown RBP10.24□□□□□ -0.77
FGD4-208ENST00000494977 ERICH6Q7L0X2 663 aa10.23□□□□□ -0.77
FGD4-208ENST00000494977 PHF23Q9BUL5 403 aaPredicted RBP10.19□□□□□ -0.78
FGD4-208ENST00000494977 BCL11AQ9H165 835 aa10.16□□□□□ -0.78
FGD4-208ENST00000494977 CENPBP07199 599 aaPredicted RBP10.07□□□□□ -0.8
FGD4-208ENST00000494977 PCGF6Q9BYE7 350 aa10.06□□□□□ -0.8
FGD4-208ENST00000494977 APLP2Q06481 763 aa10.06□□□□□ -0.8
FGD4-208ENST00000494977 FAM9AQ8IZU1 332 aaPredicted RBP10□□□□□ -0.81
FGD4-208ENST00000494977 ACIN1Q9UKV3 1341 aaKnown RBP9.99□□□□□ -0.81
FGD4-208ENST00000494977 ZEB1P37275 1124 aaPredicted RBP9.95□□□□□ -0.82
FGD4-208ENST00000494977 GTF3C3Q9Y5Q9 886 aa9.9□□□□□ -0.82
FGD4-208ENST00000494977 NEUROD1Q13562 356 aa9.85□□□□□ -0.83
FGD4-208ENST00000494977 NISCHQ9Y2I1 1504 aa9.84□□□□□ -0.83
FGD4-208ENST00000494977 SLC24A1O60721 1099 aa9.82□□□□□ -0.84
FGD4-208ENST00000494977 ANP32EQ9BTT0 268 aa9.81□□□□□ -0.84
FGD4-208ENST00000494977 MYO15BQ96JP2 1530 aa9.73□□□□□ -0.85
FGD4-208ENST00000494977 DCAF1Q9Y4B6 1507 aa9.72□□□□□ -0.85
FGD4-208ENST00000494977 CCDC180Q9P1Z9 1646 aa9.72□□□□□ -0.85
FGD4-208ENST00000494977 TRIM26Q12899 539 aaPredicted RBP9.7□□□□□ -0.86
FGD4-208ENST00000494977 CSRNP3Q8WYN3 585 aa9.62□□□□□ -0.87
FGD4-208ENST00000494977 SENP3Q9H4L4 574 aaPredicted RBP9.62□□□□□ -0.87
FGD4-208ENST00000494977 DAXXQ9UER7 740 aaPredicted RBP9.55□□□□□ -0.88
FGD4-208ENST00000494977 EIF5BO60841 1220 aaKnown RBP9.5□□□□□ -0.89
FGD4-208ENST00000494977 DIEXFQ68CQ4 756 aaKnown RBP9.49□□□□□ -0.89
FGD4-208ENST00000494977 CLSPNQ9HAW4 1339 aa9.48□□□□□ -0.89
FGD4-208ENST00000494977 UBE2Q2Q8WVN8 375 aa9.45□□□□□ -0.9
FGD4-208ENST00000494977 TSHZ2Q9NRE2 1034 aa9.4□□□□□ -0.9
FGD4-208ENST00000494977 ANO8Q9HCE9 1232 aaPredicted RBP9.4□□□□□ -0.9
FGD4-208ENST00000494977 MYT1LQ9UL68 1186 aa9.38□□□□□ -0.91
FGD4-208ENST00000494977 PLPPR3Q6T4P5 718 aa9.35□□□□□ -0.91
FGD4-208ENST00000494977 ERICH6BQ5W0A0 696 aa9.33□□□□□ -0.92
FGD4-208ENST00000494977 SUPT5HO00267 1087 aaKnown RBP9.32□□□□□ -0.92
FGD4-208ENST00000494977 YTHDC1Q96MU7 727 aaKnown RBP9.31□□□□□ -0.92
FGD4-208ENST00000494977 SUPT16HQ9Y5B9 1047 aaKnown RBP9.29□□□□□ -0.92
FGD4-208ENST00000494977 TRIM41Q8WV44 630 aa9.25□□□□□ -0.93
FGD4-208ENST00000494977 PKNOX2Q96KN3 472 aa9.22□□□□□ -0.93
FGD4-208ENST00000494977 SALL2Q9Y467 1007 aaPredicted RBP9.22□□□□□ -0.93
FGD4-208ENST00000494977 LOC105371045A0A1W2PR82 267 aa9.19□□□□□ -0.94
FGD4-208ENST00000494977 CCER1Q8TC90 406 aaPredicted RBP9.19□□□□□ -0.94
FGD4-208ENST00000494977 ZNF316A6NFI3 1004 aaPredicted RBP9.18□□□□□ -0.94
FGD4-208ENST00000494977 PODXL2Q9NZ53 605 aa9.18□□□□□ -0.94
FGD4-208ENST00000494977 DEKP35659 375 aaKnown RBP9.17□□□□□ -0.94
FGD4-208ENST00000494977 PLEKHG5O94827 1062 aa9.15□□□□□ -0.94
FGD4-208ENST00000494977 CCDC136Q96JN2 1154 aa9.15□□□□□ -0.95
FGD4-208ENST00000494977 RBM19Q9Y4C8 960 aaKnown RBP9.15□□□□□ -0.95
FGD4-208ENST00000494977 MIER1Q8N108 512 aa9.11□□□□□ -0.95
FGD4-208ENST00000494977 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.09□□□□□ -0.95
FGD4-208ENST00000494977 FANCIQ9NVI1 1328 aa9.07□□□□□ -0.96
FGD4-208ENST00000494977 SHROOM4Q9ULL8 1493 aa9.06□□□□□ -0.96
FGD4-208ENST00000494977 MSH5O43196 834 aa9.06□□□□□ -0.96
FGD4-208ENST00000494977 NEFLP07196 543 aa9.02□□□□□ -0.97
FGD4-208ENST00000494977 GLIPR1L2Q4G1C9 344 aa9.02□□□□□ -0.97
FGD4-208ENST00000494977 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.02□□□□□ -0.97
FGD4-208ENST00000494977 FOXD1Q16676 465 aa9.02□□□□□ -0.97
FGD4-208ENST00000494977 PPP6R1Q9UPN7 881 aa8.96□□□□□ -0.98
FGD4-208ENST00000494977 ADRA2BP18089 450 aa8.95□□□□□ -0.98
FGD4-208ENST00000494977 BCANQ96GW7 911 aa8.92□□□□□ -0.98
FGD4-208ENST00000494977 IL27Q8NEV9 243 aa8.92□□□□□ -0.98
FGD4-208ENST00000494977 FKBP8Q14318 412 aa8.91□□□□□ -0.98
FGD4-208ENST00000494977 RTN4Q9NQC3 1192 aaKnown RBP8.89□□□□□ -0.99
FGD4-208ENST00000494977 RTL5Q5HYW3 569 aaPredicted RBP8.89□□□□□ -0.99
FGD4-208ENST00000494977 CDK11AQ9UQ88 783 aaPredicted RBP8.86□□□□□ -0.99
FGD4-208ENST00000494977 ZMYND15Q9H091 742 aa8.86□□□□□ -0.99
FGD4-208ENST00000494977 RSPH6AQ9H0K4 717 aa8.86□□□□□ -0.99
FGD4-208ENST00000494977 PDE4CQ08493 712 aa8.84□□□□□ -0.99
FGD4-208ENST00000494977 NBR1Q14596 966 aa8.83□□□□□ -1
FGD4-208ENST00000494977 NOP58Q9Y2X3 529 aaKnown RBP8.82□□□□□ -1
FGD4-208ENST00000494977 VSIG10Q8N0Z9 540 aa8.81□□□□□ -1
FGD4-208ENST00000494977 C11orf95C9JLR9 678 aaPredicted RBP8.81□□□□□ -1
FGD4-208ENST00000494977 PDIA4P13667 645 aaKnown RBP8.8□□□□□ -1
FGD4-208ENST00000494977 FGD1P98174 961 aa8.79□□□□□ -1
FGD4-208ENST00000494977 RANGAP1P46060 587 aaPredicted RBP8.79□□□□□ -1
FGD4-208ENST00000494977 ITGAEP38570 1179 aa8.78□□□□□ -1
FGD4-208ENST00000494977 AAMPQ13685 434 aa8.74□□□□□ -1.01
FGD4-208ENST00000494977 TIMELESSQ9UNS1 1208 aa8.74□□□□□ -1.01
FGD4-208ENST00000494977 A0A0U1RQG5 324 aaPredicted RBP8.73□□□□□ -1.01
FGD4-208ENST00000494977 RBM10P98175 930 aaKnown RBP8.71□□□□□ -1.01
FGD4-208ENST00000494977 USP35Q9P2H5 1018 aa8.71□□□□□ -1.01
FGD4-208ENST00000494977 WASHC2AQ641Q2 1341 aa8.7□□□□□ -1.02
FGD4-208ENST00000494977 WASHC2CQ9Y4E1 1318 aa8.7□□□□□ -1.02
FGD4-208ENST00000494977 PAK3O75914 559 aaPredicted RBP8.67□□□□□ -1.02
FGD4-208ENST00000494977 NCBP3Q53F19 620 aaKnown RBP8.67□□□□□ -1.02
FGD4-208ENST00000494977 TAF7LQ5H9L4 462 aa8.67□□□□□ -1.02
FGD4-208ENST00000494977 ZBTB47Q9UFB7 747 aaPredicted RBP8.66□□□□□ -1.02
FGD4-208ENST00000494977 RRP9O43818 475 aaKnown RBP8.65□□□□□ -1.02
FGD4-208ENST00000494977 ANP32AP39687 249 aaKnown RBP8.65□□□□□ -1.02
FGD4-208ENST00000494977 FAM43AQ8N2R8 423 aa8.65□□□□□ -1.02
FGD4-208ENST00000494977 BCL11BQ9C0K0 894 aaPredicted RBP8.65□□□□□ -1.02
FGD4-208ENST00000494977 HSP90AA2PQ14568 343 aaPredicted RBP8.64□□□□□ -1.03
FGD4-208ENST00000494977 IPO9Q96P70 1041 aaKnown RBP8.64□□□□□ -1.03
FGD4-208ENST00000494977 ARXQ96QS3 562 aa8.64□□□□□ -1.03
FGD4-208ENST00000494977 NEFMP07197 916 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms