RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 KIAA1109Q2LD37 5005 aa1.7□□□□□ -2.14
PRKD3-210ENST00000494667 MT2AP02795 61 aa1.7□□□□□ -2.14
PRKD3-210ENST00000494667 MT1FP04733 61 aa1.69□□□□□ -2.14
PRKD3-210ENST00000494667 KRTAP9-8Q9BYQ0 159 aa1.68□□□□□ -2.14
PRKD3-210ENST00000494667 MT1HP80294 61 aa1.65□□□□□ -2.15
PRKD3-210ENST00000494667 KRTAP4-5Q9BYR2 181 aa1.65□□□□□ -2.15
PRKD3-210ENST00000494667 M0R2T5 61 aa1.64□□□□□ -2.15
PRKD3-210ENST00000494667 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.63□□□□□ -2.15
PRKD3-210ENST00000494667 UBR4Q5T4S7 5183 aa1.62□□□□□ -2.15
PRKD3-210ENST00000494667 MUC2Q02817 5179 aa1.61□□□□□ -2.15
PRKD3-210ENST00000494667 EPPK1P58107 5090 aaKnown RBP1.6□□□□□ -2.15
PRKD3-210ENST00000494667 MT1EP04732 61 aa1.59□□□□□ -2.16
PRKD3-210ENST00000494667 KRTAP19-7Q3SYF9 63 aa1.58□□□□□ -2.16
PRKD3-210ENST00000494667 MT3P25713 68 aa1.56□□□□□ -2.16
PRKD3-210ENST00000494667 MT1LQ93083 61 aa1.56□□□□□ -2.16
PRKD3-210ENST00000494667 KRTAP12-4P60329 112 aa1.54□□□□□ -2.16
PRKD3-210ENST00000494667 MUC5BQ9HC84 5762 aaPredicted RBP1.54□□□□□ -2.16
PRKD3-210ENST00000494667 GPR98Q8WXG9 6306 aa1.53□□□□□ -2.16
PRKD3-210ENST00000494667 MT1AP04731 61 aa1.53□□□□□ -2.16
PRKD3-210ENST00000494667 KRTAP2-2Q9BYT5 123 aa1.53□□□□□ -2.16
PRKD3-210ENST00000494667 OBSCNQ5VST9 7968 aa1.49□□□□□ -2.17
PRKD3-210ENST00000494667 FAT4Q6V0I7 4981 aa1.48□□□□□ -2.17
PRKD3-210ENST00000494667 KRTAP6-3Q3LI67 103 aa1.47□□□□□ -2.17
PRKD3-210ENST00000494667 KRTAP5-5Q701N2 237 aaPredicted RBP1.45□□□□□ -2.18
PRKD3-210ENST00000494667 RNF213Q63HN8 5207 aa1.44□□□□□ -2.18
PRKD3-210ENST00000494667 LCE1AQ5T7P2 110 aa1.44□□□□□ -2.18
PRKD3-210ENST00000494667 SSPOA2VEC9 5147 aa1.42□□□□□ -2.18
PRKD3-210ENST00000494667 KRTAP5-9P26371 169 aa1.42□□□□□ -2.18
PRKD3-210ENST00000494667 LCE3EQ5T5B0 92 aa1.4□□□□□ -2.19
PRKD3-210ENST00000494667 KRTAP5-2Q701N4 177 aa1.4□□□□□ -2.19
PRKD3-210ENST00000494667 PRM1P04553 51 aa1.39□□□□□ -2.19
PRKD3-210ENST00000494667 MT1MQ8N339 61 aa1.39□□□□□ -2.19
PRKD3-210ENST00000494667 MT1GP13640 62 aa1.39□□□□□ -2.19
PRKD3-210ENST00000494667 LCE3DQ9BYE3 92 aa1.37□□□□□ -2.19
PRKD3-210ENST00000494667 KRTAP19-3Q7Z4W3 81 aa1.36□□□□□ -2.19
PRKD3-210ENST00000494667 SPRR2FQ96RM1 72 aa1.35□□□□□ -2.19
PRKD3-210ENST00000494667 LCE1FQ5T754 118 aa1.34□□□□□ -2.2
PRKD3-210ENST00000494667 KRTAP4-3Q9BYR4 195 aa1.33□□□□□ -2.2
PRKD3-210ENST00000494667 USH2AO75445 5202 aa1.33□□□□□ -2.2
PRKD3-210ENST00000494667 KRTAP4-4Q9BYR3 166 aa1.32□□□□□ -2.2
PRKD3-210ENST00000494667 KMT2DO14686 5537 aa1.32□□□□□ -2.2
PRKD3-210ENST00000494667 KRTAP19-6Q3LI70 58 aa1.31□□□□□ -2.2
PRKD3-210ENST00000494667 KRTAP6-2Q3LI66 62 aa1.3□□□□□ -2.2
PRKD3-210ENST00000494667 SPRR2AP35326 72 aa1.29□□□□□ -2.2
PRKD3-210ENST00000494667 KRTAP5-4Q6L8H1 288 aa1.29□□□□□ -2.2
PRKD3-210ENST00000494667 KRTAP6-1Q3LI64 71 aa1.28□□□□□ -2.2
PRKD3-210ENST00000494667 SPRR2BP35325 72 aa1.24□□□□□ -2.21
PRKD3-210ENST00000494667 SPRR2EP22531 72 aa1.23□□□□□ -2.21
PRKD3-210ENST00000494667 LCE1EQ5T753 118 aa1.22□□□□□ -2.21
PRKD3-210ENST00000494667 KRTAP5-7Q6L8G8 165 aa1.21□□□□□ -2.22
PRKD3-210ENST00000494667 SYNE1Q8NF91 8797 aaKnown RBP1.21□□□□□ -2.22
PRKD3-210ENST00000494667 AHNAKQ09666 5890 aaKnown RBP1.2□□□□□ -2.22
PRKD3-210ENST00000494667 CRCT1Q9UGL9 99 aa1.2□□□□□ -2.22
PRKD3-210ENST00000494667 KRTAP5-11Q6L8G4 156 aa1.19□□□□□ -2.22
PRKD3-210ENST00000494667 SPRR2DP22532 72 aa1.18□□□□□ -2.22
PRKD3-210ENST00000494667 KRTAP5-8O75690 187 aa1.12□□□□□ -2.23
PRKD3-210ENST00000494667 FCGBPQ9Y6R7 5405 aaPredicted RBP1.12□□□□□ -2.23
PRKD3-210ENST00000494667 MUC12Q9UKN1 5478 aa1.08□□□□□ -2.24
PRKD3-210ENST00000494667 NEBP20929 6669 aa1.08□□□□□ -2.24
PRKD3-210ENST00000494667 KRTAP5-10Q6L8G5 202 aa1.07□□□□□ -2.24
PRKD3-210ENST00000494667 AHNAK2Q8IVF2 5795 aa1.06□□□□□ -2.24
PRKD3-210ENST00000494667 KRTAP5-1Q6L8H4 278 aa1.04□□□□□ -2.24
PRKD3-210ENST00000494667 MDN1Q9NU22 5596 aa1.04□□□□□ -2.24
PRKD3-210ENST00000494667 KRTAP20-1Q3LI63 56 aa1.04□□□□□ -2.24
PRKD3-210ENST00000494667 MACF1Q9UPN3 7388 aaKnown RBP1.04□□□□□ -2.24
PRKD3-210ENST00000494667 KRTAP21-1Q3LI58 79 aa1.01□□□□□ -2.25
PRKD3-210ENST00000494667 SYNE2Q8WXH0 6885 aaKnown RBP0.97□□□□□ -2.25
PRKD3-210ENST00000494667 MUC5ACP98088 5654 aa0.96□□□□□ -2.26
PRKD3-210ENST00000494667 DSTQ03001 7570 aaKnown RBP0.92□□□□□ -2.26
PRKD3-210ENST00000494667 LCE1CQ5T751 118 aa0.89□□□□□ -2.27
PRKD3-210ENST00000494667 LCE1BQ5T7P3 118 aa0.89□□□□□ -2.27
PRKD3-210ENST00000494667 KRTAP20-2Q3LI61 65 aa0.88□□□□□ -2.27
PRKD3-210ENST00000494667 FSIP2Q5CZC0 6907 aa0.87□□□□□ -2.27
PRKD3-210ENST00000494667 KRTAP21-2Q3LI59 83 aa0.87□□□□□ -2.27
PRKD3-210ENST00000494667 MUC19Q7Z5P9 8384 aa0.79□□□□□ -2.28
PRKD3-210ENST00000494667 MT4P47944 62 aa0.71□□□□□ -2.3
PRKD3-210ENST00000494667 PHGR1C9JFL3 82 aa0.63□□□□□ -2.31
PRKD3-210ENST00000494667 MUC16Q8WXI7 14507 aa0.51□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 71.5 ms