RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 SERP2Q8N6R1 65 aa3.2□□□□□ -1.9
RIF1-211ENST00000494333 PP632Q6XCG6 107 aa3.17□□□□□ -1.9
RIF1-211ENST00000494333 SPRR2DP22532 72 aa3.16□□□□□ -1.9
RIF1-211ENST00000494333 KRTAP13-4Q3LI77 160 aa3.16□□□□□ -1.9
RIF1-211ENST00000494333 KRTAP2-1Q9BYU5 128 aa3.15□□□□□ -1.91
RIF1-211ENST00000494333 SPRR5A0A1B0GTR4 108 aa3.14□□□□□ -1.91
RIF1-211ENST00000494333 COA5Q86WW8 74 aa3.13□□□□□ -1.91
RIF1-211ENST00000494333 SEC61GP60059 68 aa3.11□□□□□ -1.91
RIF1-211ENST00000494333 SERP1Q9Y6X1 66 aa3.11□□□□□ -1.91
RIF1-211ENST00000494333 COX7CP15954 63 aa3.1□□□□□ -1.91
RIF1-211ENST00000494333 A0A0D9SG42 100 aa3.09□□□□□ -1.91
RIF1-211ENST00000494333 LCE1CQ5T751 118 aa3.08□□□□□ -1.92
RIF1-211ENST00000494333 LCE1BQ5T7P3 118 aa3.08□□□□□ -1.92
RIF1-211ENST00000494333 SPATA8Q6RVD6 105 aa3.07□□□□□ -1.92
RIF1-211ENST00000494333 A0A1B0GU33 70 aa3.06□□□□□ -1.92
RIF1-211ENST00000494333 H7BZZ5 65 aa3.05□□□□□ -1.92
RIF1-211ENST00000494333 SPINT4Q6UDR6 99 aa3.05□□□□□ -1.92
RIF1-211ENST00000494333 CYSTM1Q9H1C7 97 aa3.05□□□□□ -1.92
RIF1-211ENST00000494333 KRTAP19-7Q3SYF9 63 aa3.02□□□□□ -1.93
RIF1-211ENST00000494333 KRTAP12-1P59990 96 aa3.01□□□□□ -1.93
RIF1-211ENST00000494333 KRTAP5-2Q701N4 177 aa3.01□□□□□ -1.93
RIF1-211ENST00000494333 A0A1B0GU69 56 aa2.99□□□□□ -1.93
RIF1-211ENST00000494333 MT1EP04732 61 aa2.99□□□□□ -1.93
RIF1-211ENST00000494333 KRTAP19-3Q7Z4W3 81 aa2.98□□□□□ -1.93
RIF1-211ENST00000494333 SMIM26A0A096LP01 95 aa2.96□□□□□ -1.94
RIF1-211ENST00000494333 ANAPC13Q9BS18 74 aa2.96□□□□□ -1.94
RIF1-211ENST00000494333 KRTAP19-5Q3LI72 72 aa2.95□□□□□ -1.94
RIF1-211ENST00000494333 CCDC179H3BU77 68 aa2.91□□□□□ -1.94
RIF1-211ENST00000494333 MT1GP13640 62 aa2.91□□□□□ -1.94
RIF1-211ENST00000494333 DSTQ03001 7570 aaKnown RBP2.89□□□□□ -1.95
RIF1-211ENST00000494333 TNP1P09430 55 aa2.88□□□□□ -1.95
RIF1-211ENST00000494333 PRR15LQ9BU68 103 aa2.88□□□□□ -1.95
RIF1-211ENST00000494333 C10orf95Q9H7T3 257 aa2.88□□□□□ -1.95
RIF1-211ENST00000494333 ATP5EP56381 51 aaPredicted RBP2.86□□□□□ -1.95
RIF1-211ENST00000494333 MT1LQ93083 61 aa2.86□□□□□ -1.95
RIF1-211ENST00000494333 MT1MQ8N339 61 aa2.85□□□□□ -1.95
RIF1-211ENST00000494333 LINC01558Q9Y6Z2 57 aa2.85□□□□□ -1.95
RIF1-211ENST00000494333 UQCR11O14957 56 aa2.79□□□□□ -1.96
RIF1-211ENST00000494333 TMEM258P61165 79 aa2.78□□□□□ -1.96
RIF1-211ENST00000494333 RPS28P62857 69 aaKnown RBP2.78□□□□□ -1.96
RIF1-211ENST00000494333 MT4P47944 62 aa2.77□□□□□ -1.97
RIF1-211ENST00000494333 KRTAP12-3P60328 96 aa2.76□□□□□ -1.97
RIF1-211ENST00000494333 MIR22HGQ0VDD5 57 aa2.73□□□□□ -1.97
RIF1-211ENST00000494333 K7ERS5 55 aa2.69□□□□□ -1.98
RIF1-211ENST00000494333 KRTAP25-1Q3LHN0 102 aa2.69□□□□□ -1.98
RIF1-211ENST00000494333 PSPHP1O15172 72 aa2.67□□□□□ -1.98
RIF1-211ENST00000494333 V9GYY9 64 aa2.66□□□□□ -1.98
RIF1-211ENST00000494333 HMCN1Q96RW7 5635 aa2.65□□□□□ -1.99
RIF1-211ENST00000494333 GPR98Q8WXG9 6306 aa2.64□□□□□ -1.99
RIF1-211ENST00000494333 Q1T7F1 81 aa2.63□□□□□ -1.99
RIF1-211ENST00000494333 PRO0628Q9UI54 55 aa2.63□□□□□ -1.99
RIF1-211ENST00000494333 KRTAP5-10Q6L8G5 202 aa2.59□□□□□ -1.99
RIF1-211ENST00000494333 KRTAP20-2Q3LI61 65 aa2.58□□□□□ -2
RIF1-211ENST00000494333 A6NED7 52 aa2.57□□□□□ -2
RIF1-211ENST00000494333 KRTAP12-4P60329 112 aa2.57□□□□□ -2
RIF1-211ENST00000494333 KRTAP5-7Q6L8G8 165 aa2.57□□□□□ -2
RIF1-211ENST00000494333 KRTAP5-8O75690 187 aa2.53□□□□□ -2
RIF1-211ENST00000494333 CDC42SE1Q9NRR8 79 aa2.53□□□□□ -2
RIF1-211ENST00000494333 AHNAK2Q8IVF2 5795 aa2.52□□□□□ -2.01
RIF1-211ENST00000494333 MUC19Q7Z5P9 8384 aa2.5□□□□□ -2.01
RIF1-211ENST00000494333 SYNE1Q8NF91 8797 aaKnown RBP2.49□□□□□ -2.01
RIF1-211ENST00000494333 ROMO1P60602 79 aa2.49□□□□□ -2.01
RIF1-211ENST00000494333 PMAIP1Q13794 54 aa2.48□□□□□ -2.01
RIF1-211ENST00000494333 LUZP6Q538Z0 58 aa2.47□□□□□ -2.01
RIF1-211ENST00000494333 BRK1Q8WUW1 75 aa2.44□□□□□ -2.02
RIF1-211ENST00000494333 MT1AP04731 61 aa2.43□□□□□ -2.02
RIF1-211ENST00000494333 KRTAP6-1Q3LI64 71 aa2.42□□□□□ -2.02
RIF1-211ENST00000494333 KTN1-AS1Q86SY8 53 aa2.37□□□□□ -2.03
RIF1-211ENST00000494333 KRTAP6-2Q3LI66 62 aa2.32□□□□□ -2.04
RIF1-211ENST00000494333 KRTAP21-2Q3LI59 83 aa2.19□□□□□ -2.06
RIF1-211ENST00000494333 MUC5ACP98088 5654 aa2.11□□□□□ -2.07
RIF1-211ENST00000494333 MUC5BQ9HC84 5762 aaPredicted RBP2.07□□□□□ -2.08
RIF1-211ENST00000494333 AHNAKQ09666 5890 aaKnown RBP2.04□□□□□ -2.08
RIF1-211ENST00000494333 INE1O15225 51 aa1.7□□□□□ -2.14
RIF1-211ENST00000494333 PHGR1C9JFL3 82 aa1.52□□□□□ -2.17
RIF1-211ENST00000494333 PRM1P04553 51 aa1.27□□□□□ -2.21
RIF1-211ENST00000494333 MUC16Q8WXI7 14507 aa1.15□□□□□ -2.23
RIF1-211ENST00000494333 KRTAP21-1Q3LI58 79 aa1.15□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 19.2 ms