RNA–Protein interactions for RNA: ENST00000494174.5

NECAB3-215, Transcript of N-terminal EF-hand calcium binding protein 3, human

TSL 5

Gene NECAB3, Length 859 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAB3-215	ENST00000494174		Q1T7F1	81 aa		6.96	□□□□□ -1.3
NECAB3-215	ENST00000494174	MT1M	Q8N339	61 aa		6.95	□□□□□ -1.3
NECAB3-215	ENST00000494174	PSPHP1	O15172	72 aa		6.84	□□□□□ -1.31
NECAB3-215	ENST00000494174	KRTAP25-1	Q3LHN0	102 aa		6.83	□□□□□ -1.32
NECAB3-215	ENST00000494174	KRTAP12-3	P60328	96 aa		6.82	□□□□□ -1.32
NECAB3-215	ENST00000494174		K7ERS5	55 aa		6.81	□□□□□ -1.32
NECAB3-215	ENST00000494174	LCE4A	Q5TA78	99 aa		6.71	□□□□□ -1.34
NECAB3-215	ENST00000494174	KRTAP4-3	Q9BYR4	195 aa		6.71	□□□□□ -1.34
NECAB3-215	ENST00000494174	KRTAP4-9	Q9BYQ8	210 aa		6.7	□□□□□ -1.34
NECAB3-215	ENST00000494174	RPS28	P62857	69 aa	Known RBP	6.69	□□□□□ -1.34
NECAB3-215	ENST00000494174	KRTAP23-1	A1A580	65 aa		6.67	□□□□□ -1.34
NECAB3-215	ENST00000494174	KRTAP5-4	Q6L8H1	288 aa		6.65	□□□□□ -1.34
NECAB3-215	ENST00000494174		A6NED7	52 aa		6.63	□□□□□ -1.35
NECAB3-215	ENST00000494174	HMCN1	Q96RW7	5635 aa		6.63	□□□□□ -1.35
NECAB3-215	ENST00000494174	LCE1D	Q5T752	114 aa		6.62	□□□□□ -1.35
NECAB3-215	ENST00000494174	KRTAP4-7	Q9BYR0	210 aa		6.6	□□□□□ -1.35
NECAB3-215	ENST00000494174	KRTAP19-4	Q3LI73	84 aa		6.59	□□□□□ -1.35
NECAB3-215	ENST00000494174	SVIP	Q8NHG7	77 aa		6.58	□□□□□ -1.36
NECAB3-215	ENST00000494174	PCP4	P48539	62 aa		6.55	□□□□□ -1.36
NECAB3-215	ENST00000494174	GPR98	Q8WXG9	6306 aa		6.54	□□□□□ -1.36
NECAB3-215	ENST00000494174	MT4	P47944	62 aa		6.49	□□□□□ -1.37
NECAB3-215	ENST00000494174	CDC42SE1	Q9NRR8	79 aa		6.48	□□□□□ -1.37
NECAB3-215	ENST00000494174	KRTAP5-5	Q701N2	237 aa	Predicted RBP	6.44	□□□□□ -1.38
NECAB3-215	ENST00000494174	KRTAP15-1	Q3LI76	137 aa		6.41	□□□□□ -1.38
NECAB3-215	ENST00000494174	ROMO1	P60602	79 aa		6.39	□□□□□ -1.39
NECAB3-215	ENST00000494174	KRTAP4-6	Q9BYQ5	205 aa		6.38	□□□□□ -1.39
NECAB3-215	ENST00000494174	AHNAK2	Q8IVF2	5795 aa		6.34	□□□□□ -1.39
NECAB3-215	ENST00000494174	LCE3C	Q5T5A8	94 aa		6.3	□□□□□ -1.4
NECAB3-215	ENST00000494174	LOC100996750	A0A140TA64	210 aa		6.24	□□□□□ -1.41
NECAB3-215	ENST00000494174	SPRR5	A0A1B0GTR4	108 aa		6.24	□□□□□ -1.41
NECAB3-215	ENST00000494174	KRTAP20-2	Q3LI61	65 aa		6.2	□□□□□ -1.42
NECAB3-215	ENST00000494174	KRTAP12-4	P60329	112 aa		6.16	□□□□□ -1.42
NECAB3-215	ENST00000494174	KRTAP5-10	Q6L8G5	202 aa		6.15	□□□□□ -1.42
NECAB3-215	ENST00000494174	SYNE1	Q8NF91	8797 aa	Known RBP	6.14	□□□□□ -1.43
NECAB3-215	ENST00000494174	KRTAP5-3	Q6L8H2	238 aa		6.06	□□□□□ -1.44
NECAB3-215	ENST00000494174	MT1A	P04731	61 aa		5.98	□□□□□ -1.45
NECAB3-215	ENST00000494174	KRTAP9-6	A8MVA2	160 aa		5.95	□□□□□ -1.46
NECAB3-215	ENST00000494174	KRTAP5-7	Q6L8G8	165 aa		5.92	□□□□□ -1.46
NECAB3-215	ENST00000494174	KRTAP6-1	Q3LI64	71 aa		5.9	□□□□□ -1.46
NECAB3-215	ENST00000494174	KRTAP5-2	Q701N4	177 aa		5.85	□□□□□ -1.47
NECAB3-215	ENST00000494174	KRTAP9-4	Q9BYQ2	154 aa		5.76	□□□□□ -1.49
NECAB3-215	ENST00000494174	BRK1	Q8WUW1	75 aa		5.74	□□□□□ -1.49
NECAB3-215	ENST00000494174	KRTAP4-11	Q9BYQ6	195 aa		5.63	□□□□□ -1.51
NECAB3-215	ENST00000494174	KRTAP6-2	Q3LI66	62 aa		5.61	□□□□□ -1.51
NECAB3-215	ENST00000494174	KRTAP5-8	O75690	187 aa		5.46	□□□□□ -1.54
NECAB3-215	ENST00000494174	MT3	P25713	68 aa		5.45	□□□□□ -1.54
NECAB3-215	ENST00000494174	PMAIP1	Q13794	54 aa		5.41	□□□□□ -1.54
NECAB3-215	ENST00000494174	OBSCN	Q5VST9	7968 aa		5.37	□□□□□ -1.55
NECAB3-215	ENST00000494174	MUC5B	Q9HC84	5762 aa	Predicted RBP	5.24	□□□□□ -1.57
NECAB3-215	ENST00000494174	KRTAP5-1	Q6L8H4	278 aa		5.2	□□□□□ -1.58
NECAB3-215	ENST00000494174	AHNAK	Q09666	5890 aa	Known RBP	5.19	□□□□□ -1.58
NECAB3-215	ENST00000494174	PRAC1	Q96KF2	57 aa		5.18	□□□□□ -1.58
NECAB3-215	ENST00000494174	MUC5AC	P98088	5654 aa		5.18	□□□□□ -1.58
NECAB3-215	ENST00000494174	KRTAP9-9	Q9BYP9	154 aa		5.11	□□□□□ -1.59
NECAB3-215	ENST00000494174	PRO0628	Q9UI54	55 aa		5.11	□□□□□ -1.59
NECAB3-215	ENST00000494174	LCE1E	Q5T753	118 aa		5.06	□□□□□ -1.6
NECAB3-215	ENST00000494174	KTN1-AS1	Q86SY8	53 aa		4.87	□□□□□ -1.63
NECAB3-215	ENST00000494174	KRTAP4-2	Q9BYR5	136 aa		4.73	□□□□□ -1.65
NECAB3-215	ENST00000494174	LCE1C	Q5T751	118 aa		4.68	□□□□□ -1.66
NECAB3-215	ENST00000494174	LCE1B	Q5T7P3	118 aa		4.68	□□□□□ -1.66
NECAB3-215	ENST00000494174		H3BS24	57 aa		4.57	□□□□□ -1.68
NECAB3-215	ENST00000494174	LCE3D	Q9BYE3	92 aa		4.55	□□□□□ -1.68
NECAB3-215	ENST00000494174	LUZP6	Q538Z0	58 aa		4.38	□□□□□ -1.71
NECAB3-215	ENST00000494174	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4.32	□□□□□ -1.72
NECAB3-215	ENST00000494174	LCE3E	Q5T5B0	92 aa		4.3	□□□□□ -1.72
NECAB3-215	ENST00000494174	KRTAP5-11	Q6L8G4	156 aa		4.24	□□□□□ -1.73
NECAB3-215	ENST00000494174		A0A0A0MQY5	61 aa		4.2	□□□□□ -1.74
NECAB3-215	ENST00000494174	KRTAP4-12	Q9BQ66	201 aa		4.12	□□□□□ -1.75
NECAB3-215	ENST00000494174	LCE1F	Q5T754	118 aa		4.11	□□□□□ -1.75
NECAB3-215	ENST00000494174	KRTAP21-2	Q3LI59	83 aa		3.93	□□□□□ -1.78
NECAB3-215	ENST00000494174	NDUFAF8	A1L188	74 aa		3.68	□□□□□ -1.82
NECAB3-215	ENST00000494174	PHGR1	C9JFL3	82 aa		3.64	□□□□□ -1.83
NECAB3-215	ENST00000494174	KRTAP4-4	Q9BYR3	166 aa		3.46	□□□□□ -1.86
NECAB3-215	ENST00000494174	MUC19	Q7Z5P9	8384 aa		3.3	□□□□□ -1.88
NECAB3-215	ENST00000494174	PRM1	P04553	51 aa		3.24	□□□□□ -1.89
NECAB3-215	ENST00000494174	INE1	O15225	51 aa		3.22	□□□□□ -1.89
NECAB3-215	ENST00000494174	KRTAP21-1	Q3LI58	79 aa		2.71	□□□□□ -1.98
NECAB3-215	ENST00000494174	MUC16	Q8WXI7	14507 aa		2.35	□□□□□ -2.03

Retrieved 78 of 20,778 RNA–protein pairs in 64.4 ms