RNA–Protein interactions for RNA: ENST00000494018.1

NR1H3-225, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 510 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-225ENST00000494018 KRTAP5-1Q6L8H4 278 aa2.89□□□□□ -1.95
NR1H3-225ENST00000494018 KRTAP6-1Q3LI64 71 aa2.88□□□□□ -1.95
NR1H3-225ENST00000494018 KRTAP6-2Q3LI66 62 aa2.88□□□□□ -1.95
NR1H3-225ENST00000494018 LINC00643Q86TS7 51 aa2.88□□□□□ -1.95
NR1H3-225ENST00000494018 SPTSSBQ8NFR3 76 aa2.87□□□□□ -1.95
NR1H3-225ENST00000494018 SMIM20Q8N5G0 67 aa2.84□□□□□ -1.95
NR1H3-225ENST00000494018 KRTAP9-4Q9BYQ2 154 aa2.83□□□□□ -1.96
NR1H3-225ENST00000494018 ACYP2P14621 99 aa2.82□□□□□ -1.96
NR1H3-225ENST00000494018 SEC61GP60059 68 aa2.81□□□□□ -1.96
NR1H3-225ENST00000494018 SPINT4Q6UDR6 99 aa2.81□□□□□ -1.96
NR1H3-225ENST00000494018 KRTAP12-3P60328 96 aa2.8□□□□□ -1.96
NR1H3-225ENST00000494018 MT1AP04731 61 aa2.78□□□□□ -1.96
NR1H3-225ENST00000494018 CHKB-CPT1BH3BT56 60 aa2.77□□□□□ -1.97
NR1H3-225ENST00000494018 RPS28P62857 69 aaKnown RBP2.74□□□□□ -1.97
NR1H3-225ENST00000494018 ANAPC13Q9BS18 74 aa2.74□□□□□ -1.97
NR1H3-225ENST00000494018 J3QR89 54 aa2.73□□□□□ -1.97
NR1H3-225ENST00000494018 CCDC179H3BU77 68 aa2.72□□□□□ -1.97
NR1H3-225ENST00000494018 PRO0628Q9UI54 55 aa2.71□□□□□ -1.98
NR1H3-225ENST00000494018 V9GYY9 64 aa2.71□□□□□ -1.98
NR1H3-225ENST00000494018 TNP1P09430 55 aa2.69□□□□□ -1.98
NR1H3-225ENST00000494018 SPATA8Q6RVD6 105 aa2.68□□□□□ -1.98
NR1H3-225ENST00000494018 KRTAP12-1P59990 96 aa2.67□□□□□ -1.98
NR1H3-225ENST00000494018 SPANXA2-OT1Q8N9U9 137 aa2.65□□□□□ -1.99
NR1H3-225ENST00000494018 SERP1Q9Y6X1 66 aa2.61□□□□□ -1.99
NR1H3-225ENST00000494018 TMEM258P61165 79 aa2.6□□□□□ -1.99
NR1H3-225ENST00000494018 KRTAP4-12Q9BQ66 201 aa2.59□□□□□ -1.99
NR1H3-225ENST00000494018 KRTAP4-2Q9BYR5 136 aa2.59□□□□□ -1.99
NR1H3-225ENST00000494018 SNURFQ9Y675 71 aa2.58□□□□□ -2
NR1H3-225ENST00000494018 A0A1B0GU33 70 aa2.57□□□□□ -2
NR1H3-225ENST00000494018 MT3P25713 68 aa2.57□□□□□ -2
NR1H3-225ENST00000494018 COX7CP15954 63 aa2.56□□□□□ -2
NR1H3-225ENST00000494018 COA5Q86WW8 74 aa2.56□□□□□ -2
NR1H3-225ENST00000494018 PMAIP1Q13794 54 aa2.55□□□□□ -2
NR1H3-225ENST00000494018 SMIM26A0A096LP01 95 aa2.53□□□□□ -2
NR1H3-225ENST00000494018 H3BS24 57 aa2.53□□□□□ -2
NR1H3-225ENST00000494018 LCE1BQ5T7P3 118 aa2.53□□□□□ -2
NR1H3-225ENST00000494018 KRTAP25-1Q3LHN0 102 aa2.52□□□□□ -2.01
NR1H3-225ENST00000494018 LCE3CQ5T5A8 94 aa2.51□□□□□ -2.01
NR1H3-225ENST00000494018 SERP2Q8N6R1 65 aa2.49□□□□□ -2.01
NR1H3-225ENST00000494018 BRK1Q8WUW1 75 aa2.48□□□□□ -2.01
NR1H3-225ENST00000494018 A8MU10 97 aa2.46□□□□□ -2.02
NR1H3-225ENST00000494018 KRTAP9-6A8MVA2 160 aa2.45□□□□□ -2.02
NR1H3-225ENST00000494018 LCE1EQ5T753 118 aa2.45□□□□□ -2.02
NR1H3-225ENST00000494018 KTN1-AS1Q86SY8 53 aa2.45□□□□□ -2.02
NR1H3-225ENST00000494018 A0A1B0GU69 56 aa2.44□□□□□ -2.02
NR1H3-225ENST00000494018 PHGR1C9JFL3 82 aa2.44□□□□□ -2.02
NR1H3-225ENST00000494018 H7BZZ5 65 aa2.43□□□□□ -2.02
NR1H3-225ENST00000494018 ATP5EP56381 51 aaPredicted RBP2.43□□□□□ -2.02
NR1H3-225ENST00000494018 KRTAP19-4Q3LI73 84 aa2.43□□□□□ -2.02
NR1H3-225ENST00000494018 KRTAP15-1Q3LI76 137 aa2.42□□□□□ -2.02
NR1H3-225ENST00000494018 Q1T7F1 81 aa2.38□□□□□ -2.03
NR1H3-225ENST00000494018 A0A0A0MQY5 61 aa2.35□□□□□ -2.03
NR1H3-225ENST00000494018 PRR15LQ9BU68 103 aa2.35□□□□□ -2.03
NR1H3-225ENST00000494018 KRTAP5-11Q6L8G4 156 aa2.31□□□□□ -2.04
NR1H3-225ENST00000494018 LCE1CQ5T751 118 aa2.3□□□□□ -2.04
NR1H3-225ENST00000494018 KRTAP23-1A1A580 65 aa2.26□□□□□ -2.05
NR1H3-225ENST00000494018 PSPHP1O15172 72 aa2.26□□□□□ -2.05
NR1H3-225ENST00000494018 CDC42SE1Q9NRR8 79 aa2.25□□□□□ -2.05
NR1H3-225ENST00000494018 UQCR11O14957 56 aa2.24□□□□□ -2.05
NR1H3-225ENST00000494018 LINC01558Q9Y6Z2 57 aa2.24□□□□□ -2.05
NR1H3-225ENST00000494018 K7ERS5 55 aa2.2□□□□□ -2.06
NR1H3-225ENST00000494018 LCE1FQ5T754 118 aa2.18□□□□□ -2.06
NR1H3-225ENST00000494018 PRAC1Q96KF2 57 aa2.18□□□□□ -2.06
NR1H3-225ENST00000494018 A6NED7 52 aa2.15□□□□□ -2.07
NR1H3-225ENST00000494018 MIR22HGQ0VDD5 57 aa2.15□□□□□ -2.07
NR1H3-225ENST00000494018 ROMO1P60602 79 aa2.14□□□□□ -2.07
NR1H3-225ENST00000494018 LUZP6Q538Z0 58 aa2□□□□□ -2.09
NR1H3-225ENST00000494018 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.98□□□□□ -2.09
NR1H3-225ENST00000494018 MUC19Q7Z5P9 8384 aa1.96□□□□□ -2.1
NR1H3-225ENST00000494018 NDUFAF8A1L188 74 aa1.96□□□□□ -2.1
NR1H3-225ENST00000494018 KRTAP4-4Q9BYR3 166 aa1.95□□□□□ -2.1
NR1H3-225ENST00000494018 KRTAP21-2Q3LI59 83 aa1.87□□□□□ -2.11
NR1H3-225ENST00000494018 KRTAP21-1Q3LI58 79 aa1.8□□□□□ -2.12
NR1H3-225ENST00000494018 LCE3DQ9BYE3 92 aa1.67□□□□□ -2.14
NR1H3-225ENST00000494018 INE1O15225 51 aa1.66□□□□□ -2.14
NR1H3-225ENST00000494018 LCE3EQ5T5B0 92 aa1.47□□□□□ -2.17
NR1H3-225ENST00000494018 MUC16Q8WXI7 14507 aa1.37□□□□□ -2.19
NR1H3-225ENST00000494018 PRM1P04553 51 aa0.97□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 58.7 ms