RNA–Protein interactions for RNA: ENST00000493991.5

COL2A1-208, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 3,756 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-208ENST00000493991 SSPOA2VEC9 5147 aa3.83□□□□□ -1.8
COL2A1-208ENST00000493991 KRTAP4-3Q9BYR4 195 aa3.82□□□□□ -1.8
COL2A1-208ENST00000493991 LOC100996750A0A140TA64 210 aa3.76□□□□□ -1.81
COL2A1-208ENST00000493991 KRTAP19-7Q3SYF9 63 aa3.76□□□□□ -1.81
COL2A1-208ENST00000493991 MT1EP04732 61 aa3.74□□□□□ -1.81
COL2A1-208ENST00000493991 MT1LQ93083 61 aa3.74□□□□□ -1.81
COL2A1-208ENST00000493991 KRTAP9-6A8MVA2 160 aa3.73□□□□□ -1.81
COL2A1-208ENST00000493991 MACF1Q9UPN3 7388 aaKnown RBP3.69□□□□□ -1.82
COL2A1-208ENST00000493991 KRTAP12-4P60329 112 aa3.68□□□□□ -1.82
COL2A1-208ENST00000493991 LCE3BQ5TA77 95 aa3.66□□□□□ -1.82
COL2A1-208ENST00000493991 KRTAP19-6Q3LI70 58 aa3.66□□□□□ -1.82
COL2A1-208ENST00000493991 KRTAP9-2Q9BYQ4 174 aa3.62□□□□□ -1.83
COL2A1-208ENST00000493991 KRTAP19-3Q7Z4W3 81 aa3.61□□□□□ -1.83
COL2A1-208ENST00000493991 SPRR2EP22531 72 aa3.61□□□□□ -1.83
COL2A1-208ENST00000493991 SPRR2BP35325 72 aa3.61□□□□□ -1.83
COL2A1-208ENST00000493991 SPRR2AP35326 72 aa3.61□□□□□ -1.83
COL2A1-208ENST00000493991 MT1MQ8N339 61 aa3.56□□□□□ -1.84
COL2A1-208ENST00000493991 LCE2DQ5TA82 110 aaPredicted RBP3.5□□□□□ -1.85
COL2A1-208ENST00000493991 KRTAP4-9Q9BYQ8 210 aa3.48□□□□□ -1.85
COL2A1-208ENST00000493991 MDN1Q9NU22 5596 aa3.48□□□□□ -1.85
COL2A1-208ENST00000493991 SPRR2DP22532 72 aa3.44□□□□□ -1.86
COL2A1-208ENST00000493991 KRTAP2-3P0C7H8 128 aa3.4□□□□□ -1.86
COL2A1-208ENST00000493991 KRTAP2-4Q9BYR9 128 aa3.4□□□□□ -1.86
COL2A1-208ENST00000493991 KRTAP2-1Q9BYU5 128 aa3.4□□□□□ -1.86
COL2A1-208ENST00000493991 KRTAP19-4Q3LI73 84 aa3.37□□□□□ -1.87
COL2A1-208ENST00000493991 LCE5AQ5TCM9 118 aa3.3□□□□□ -1.88
COL2A1-208ENST00000493991 LCE3DQ9BYE3 92 aa3.28□□□□□ -1.88
COL2A1-208ENST00000493991 PRM1P04553 51 aa3.27□□□□□ -1.89
COL2A1-208ENST00000493991 LCE1AQ5T7P2 110 aa3.26□□□□□ -1.89
COL2A1-208ENST00000493991 KRTAP6-1Q3LI64 71 aa3.25□□□□□ -1.89
COL2A1-208ENST00000493991 MT4P47944 62 aa3.24□□□□□ -1.89
COL2A1-208ENST00000493991 LCE3EQ5T5B0 92 aa3.22□□□□□ -1.89
COL2A1-208ENST00000493991 KRTAP9-6A0A140TA67 174 aa3.2□□□□□ -1.9
COL2A1-208ENST00000493991 MUC19Q7Z5P9 8384 aa3.19□□□□□ -1.9
COL2A1-208ENST00000493991 KRTAP9-7A8MTY7 169 aa3.17□□□□□ -1.9
COL2A1-208ENST00000493991 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.16□□□□□ -1.9
COL2A1-208ENST00000493991 MT1AP04731 61 aa3.13□□□□□ -1.91
COL2A1-208ENST00000493991 KRTAP6-2Q3LI66 62 aa3.06□□□□□ -1.92
COL2A1-208ENST00000493991 MT3P25713 68 aa3.03□□□□□ -1.92
COL2A1-208ENST00000493991 KRTAP6-3Q3LI67 103 aa3□□□□□ -1.93
COL2A1-208ENST00000493991 KRTAP5-9P26371 169 aa2.96□□□□□ -1.94
COL2A1-208ENST00000493991 LCE1DQ5T752 114 aa2.94□□□□□ -1.94
COL2A1-208ENST00000493991 KRTAP9-4Q9BYQ2 154 aa2.92□□□□□ -1.94
COL2A1-208ENST00000493991 NEBP20929 6669 aa2.92□□□□□ -1.94
COL2A1-208ENST00000493991 LCE1BQ5T7P3 118 aa2.91□□□□□ -1.94
COL2A1-208ENST00000493991 KRTAP4-6Q9BYQ5 205 aa2.88□□□□□ -1.95
COL2A1-208ENST00000493991 KRTAP5-5Q701N2 237 aaPredicted RBP2.78□□□□□ -1.96
COL2A1-208ENST00000493991 KRTAP20-1Q3LI63 56 aa2.74□□□□□ -1.97
COL2A1-208ENST00000493991 KRTAP2-2Q9BYT5 123 aa2.71□□□□□ -1.98
COL2A1-208ENST00000493991 LCE1EQ5T753 118 aa2.69□□□□□ -1.98
COL2A1-208ENST00000493991 MUC5ACP98088 5654 aa2.67□□□□□ -1.98
COL2A1-208ENST00000493991 HMCN1Q96RW7 5635 aa2.63□□□□□ -1.99
COL2A1-208ENST00000493991 LCE4AQ5TA78 99 aa2.63□□□□□ -1.99
COL2A1-208ENST00000493991 KRTAP20-2Q3LI61 65 aa2.62□□□□□ -1.99
COL2A1-208ENST00000493991 KRTAP4-11Q9BYQ6 195 aa2.54□□□□□ -2
COL2A1-208ENST00000493991 GPR98Q8WXG9 6306 aa2.47□□□□□ -2.01
COL2A1-208ENST00000493991 KRTAP5-4Q6L8H1 288 aa2.42□□□□□ -2.02
COL2A1-208ENST00000493991 KRTAP4-4Q9BYR3 166 aa2.34□□□□□ -2.03
COL2A1-208ENST00000493991 KRTAP4-12Q9BQ66 201 aa2.3□□□□□ -2.04
COL2A1-208ENST00000493991 KRTAP4-2Q9BYR5 136 aa2.3□□□□□ -2.04
COL2A1-208ENST00000493991 AHNAK2Q8IVF2 5795 aa2.29□□□□□ -2.04
COL2A1-208ENST00000493991 MUC5BQ9HC84 5762 aaPredicted RBP2.23□□□□□ -2.05
COL2A1-208ENST00000493991 KRTAP5-3Q6L8H2 238 aa2.22□□□□□ -2.05
COL2A1-208ENST00000493991 LCE1CQ5T751 118 aa2.22□□□□□ -2.05
COL2A1-208ENST00000493991 LCE1FQ5T754 118 aa2.22□□□□□ -2.05
COL2A1-208ENST00000493991 KRTAP5-2Q701N4 177 aa2.19□□□□□ -2.06
COL2A1-208ENST00000493991 KRTAP9-9Q9BYP9 154 aa2.12□□□□□ -2.07
COL2A1-208ENST00000493991 KRTAP5-8O75690 187 aa2.08□□□□□ -2.08
COL2A1-208ENST00000493991 KRTAP5-10Q6L8G5 202 aa2.05□□□□□ -2.08
COL2A1-208ENST00000493991 KRTAP5-1Q6L8H4 278 aa2.01□□□□□ -2.09
COL2A1-208ENST00000493991 KRTAP21-2Q3LI59 83 aa1.87□□□□□ -2.11
COL2A1-208ENST00000493991 AHNAKQ09666 5890 aaKnown RBP1.87□□□□□ -2.11
COL2A1-208ENST00000493991 KRTAP5-7Q6L8G8 165 aa1.74□□□□□ -2.13
COL2A1-208ENST00000493991 KRTAP5-11Q6L8G4 156 aa1.71□□□□□ -2.14
COL2A1-208ENST00000493991 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.64□□□□□ -2.15
COL2A1-208ENST00000493991 KRTAP21-1Q3LI58 79 aa1.61□□□□□ -2.15
COL2A1-208ENST00000493991 PHGR1C9JFL3 82 aa1.5□□□□□ -2.17
COL2A1-208ENST00000493991 MUC16Q8WXI7 14507 aa1.02□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 101.6 ms