RNA–Protein interactions for RNA: ENST00000492582.5

CHKB-212, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-212ENST00000492582 KRTAP9-6A0A140TA67 174 aa10.1□□□□□ -0.79
CHKB-212ENST00000492582 KRTAP4-7Q9BYR0 210 aa10.04□□□□□ -0.8
CHKB-212ENST00000492582 MACF1Q9UPN3 7388 aaKnown RBP10.01□□□□□ -0.81
CHKB-212ENST00000492582 KRTAP9-6A8MVA2 160 aa9.99□□□□□ -0.81
CHKB-212ENST00000492582 SYNE2Q8WXH0 6885 aaKnown RBP9.77□□□□□ -0.85
CHKB-212ENST00000492582 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.71□□□□□ -0.86
CHKB-212ENST00000492582 KRTAP19-3Q7Z4W3 81 aa9.67□□□□□ -0.86
CHKB-212ENST00000492582 MT1GP13640 62 aa9.6□□□□□ -0.87
CHKB-212ENST00000492582 MT1MQ8N339 61 aa9.59□□□□□ -0.87
CHKB-212ENST00000492582 MUC12Q9UKN1 5478 aa9.57□□□□□ -0.88
CHKB-212ENST00000492582 KRTAP4-3Q9BYR4 195 aa9.55□□□□□ -0.88
CHKB-212ENST00000492582 SPRR2FQ96RM1 72 aa9.54□□□□□ -0.88
CHKB-212ENST00000492582 KRTAP2-3P0C7H8 128 aa9.49□□□□□ -0.89
CHKB-212ENST00000492582 KRTAP2-4Q9BYR9 128 aa9.49□□□□□ -0.89
CHKB-212ENST00000492582 KRTAP2-1Q9BYU5 128 aa9.49□□□□□ -0.89
CHKB-212ENST00000492582 KRTAP5-9P26371 169 aa9.49□□□□□ -0.89
CHKB-212ENST00000492582 LCE5AQ5TCM9 118 aa9.41□□□□□ -0.9
CHKB-212ENST00000492582 LOC100996750A0A140TA64 210 aa9.39□□□□□ -0.91
CHKB-212ENST00000492582 KRTAP6-3Q3LI67 103 aa9.38□□□□□ -0.91
CHKB-212ENST00000492582 MDN1Q9NU22 5596 aa9.31□□□□□ -0.92
CHKB-212ENST00000492582 KRTAP9-7A8MTY7 169 aa9.23□□□□□ -0.93
CHKB-212ENST00000492582 LCE1AQ5T7P2 110 aa9.16□□□□□ -0.94
CHKB-212ENST00000492582 SPRR2EP22531 72 aa9.08□□□□□ -0.96
CHKB-212ENST00000492582 SPRR2BP35325 72 aa9.08□□□□□ -0.96
CHKB-212ENST00000492582 SPRR2AP35326 72 aa9.08□□□□□ -0.96
CHKB-212ENST00000492582 NEBP20929 6669 aa8.83□□□□□ -1
CHKB-212ENST00000492582 DSTQ03001 7570 aaKnown RBP8.83□□□□□ -1
CHKB-212ENST00000492582 SPRR2DP22532 72 aa8.75□□□□□ -1.01
CHKB-212ENST00000492582 MT1AP04731 61 aa8.57□□□□□ -1.04
CHKB-212ENST00000492582 KRTAP6-1Q3LI64 71 aa8.57□□□□□ -1.04
CHKB-212ENST00000492582 KRTAP5-5Q701N2 237 aaPredicted RBP8.56□□□□□ -1.04
CHKB-212ENST00000492582 LCE3BQ5TA77 95 aa8.53□□□□□ -1.04
CHKB-212ENST00000492582 KRTAP4-9Q9BYQ8 210 aa8.24□□□□□ -1.09
CHKB-212ENST00000492582 KRTAP12-4P60329 112 aa8.22□□□□□ -1.09
CHKB-212ENST00000492582 KRTAP20-1Q3LI63 56 aa8.14□□□□□ -1.11
CHKB-212ENST00000492582 KRTAP9-4Q9BYQ2 154 aa8.09□□□□□ -1.11
CHKB-212ENST00000492582 SYNE1Q8NF91 8797 aaKnown RBP8.08□□□□□ -1.12
CHKB-212ENST00000492582 KRTAP2-2Q9BYT5 123 aa8.05□□□□□ -1.12
CHKB-212ENST00000492582 LCE3DQ9BYE3 92 aa7.94□□□□□ -1.14
CHKB-212ENST00000492582 KRTAP5-4Q6L8H1 288 aa7.88□□□□□ -1.15
CHKB-212ENST00000492582 LCE3EQ5T5B0 92 aa7.8□□□□□ -1.16
CHKB-212ENST00000492582 KRTAP6-2Q3LI66 62 aa7.76□□□□□ -1.17
CHKB-212ENST00000492582 LCE4AQ5TA78 99 aa7.72□□□□□ -1.17
CHKB-212ENST00000492582 MT3P25713 68 aa7.71□□□□□ -1.17
CHKB-212ENST00000492582 MT4P47944 62 aa7.64□□□□□ -1.19
CHKB-212ENST00000492582 KRTAP4-6Q9BYQ5 205 aa7.59□□□□□ -1.19
CHKB-212ENST00000492582 LCE1DQ5T752 114 aa7.55□□□□□ -1.2
CHKB-212ENST00000492582 HMCN1Q96RW7 5635 aa7.51□□□□□ -1.21
CHKB-212ENST00000492582 KRTAP20-2Q3LI61 65 aa7.39□□□□□ -1.23
CHKB-212ENST00000492582 PRM1P04553 51 aa7.21□□□□□ -1.26
CHKB-212ENST00000492582 KRTAP5-2Q701N4 177 aa7.2□□□□□ -1.26
CHKB-212ENST00000492582 KRTAP5-3Q6L8H2 238 aa7.13□□□□□ -1.27
CHKB-212ENST00000492582 OBSCNQ5VST9 7968 aa7.06□□□□□ -1.28
CHKB-212ENST00000492582 AHNAK2Q8IVF2 5795 aa6.71□□□□□ -1.34
CHKB-212ENST00000492582 LCE1EQ5T753 118 aa6.48□□□□□ -1.37
CHKB-212ENST00000492582 KRTAP4-11Q9BYQ6 195 aa6.45□□□□□ -1.38
CHKB-212ENST00000492582 KRTAP5-10Q6L8G5 202 aa6.37□□□□□ -1.39
CHKB-212ENST00000492582 MUC5ACP98088 5654 aa6.29□□□□□ -1.4
CHKB-212ENST00000492582 KRTAP5-8O75690 187 aa6.23□□□□□ -1.41
CHKB-212ENST00000492582 LCE1BQ5T7P3 118 aa6.22□□□□□ -1.41
CHKB-212ENST00000492582 KRTAP5-1Q6L8H4 278 aa6.21□□□□□ -1.42
CHKB-212ENST00000492582 GPR98Q8WXG9 6306 aa6.18□□□□□ -1.42
CHKB-212ENST00000492582 KRTAP4-2Q9BYR5 136 aa6.1□□□□□ -1.43
CHKB-212ENST00000492582 LCE1CQ5T751 118 aa6.07□□□□□ -1.44
CHKB-212ENST00000492582 KRTAP5-7Q6L8G8 165 aa5.95□□□□□ -1.46
CHKB-212ENST00000492582 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.74□□□□□ -1.49
CHKB-212ENST00000492582 KRTAP9-9Q9BYP9 154 aa5.6□□□□□ -1.51
CHKB-212ENST00000492582 KRTAP21-2Q3LI59 83 aa5.57□□□□□ -1.52
CHKB-212ENST00000492582 MUC5BQ9HC84 5762 aaPredicted RBP5.44□□□□□ -1.54
CHKB-212ENST00000492582 KRTAP5-11Q6L8G4 156 aa5.29□□□□□ -1.56
CHKB-212ENST00000492582 AHNAKQ09666 5890 aaKnown RBP5.09□□□□□ -1.59
CHKB-212ENST00000492582 KRTAP4-12Q9BQ66 201 aa5.01□□□□□ -1.61
CHKB-212ENST00000492582 KRTAP4-4Q9BYR3 166 aa5□□□□□ -1.61
CHKB-212ENST00000492582 KRTAP21-1Q3LI58 79 aa4.74□□□□□ -1.65
CHKB-212ENST00000492582 LCE1FQ5T754 118 aa4.68□□□□□ -1.66
CHKB-212ENST00000492582 PHGR1C9JFL3 82 aa4.55□□□□□ -1.68
CHKB-212ENST00000492582 MUC19Q7Z5P9 8384 aa4.28□□□□□ -1.72
CHKB-212ENST00000492582 MUC16Q8WXI7 14507 aa2.98□□□□□ -1.93
Retrieved 78 of 20,778 RNA–protein pairs in 5.4 ms