RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 MYCBP2O75592 4640 aa1.75□□□□□ -2.13
RTN4-215ENST00000491592 KRTAP8-1Q8IUC2 63 aa1.75□□□□□ -2.13
RTN4-215ENST00000491592 SPRR2GQ9BYE4 73 aa1.75□□□□□ -2.13
RTN4-215ENST00000491592 HYDINQ4G0P3 5121 aa1.72□□□□□ -2.13
RTN4-215ENST00000491592 DNHD1Q96M86 4753 aa1.72□□□□□ -2.13
RTN4-215ENST00000491592 KRTAP21-2Q3LI59 83 aa1.7□□□□□ -2.14
RTN4-215ENST00000491592 LRP2P98164 4655 aa1.68□□□□□ -2.14
RTN4-215ENST00000491592 KRTAP19-8Q3LI54 63 aa1.66□□□□□ -2.14
RTN4-215ENST00000491592 MUC17Q685J3 4493 aa1.65□□□□□ -2.15
RTN4-215ENST00000491592 FLGP20930 4061 aaPredicted RBP1.63□□□□□ -2.15
RTN4-215ENST00000491592 LPAP08519 4548 aa1.63□□□□□ -2.15
RTN4-215ENST00000491592 RYR2Q92736 4967 aa1.61□□□□□ -2.15
RTN4-215ENST00000491592 M0R2T5 61 aa1.6□□□□□ -2.15
RTN4-215ENST00000491592 MT1XP80297 61 aa1.6□□□□□ -2.15
RTN4-215ENST00000491592 MT2AP02795 61 aa1.59□□□□□ -2.15
RTN4-215ENST00000491592 HERC1Q15751 4861 aa1.58□□□□□ -2.16
RTN4-215ENST00000491592 KMT2CQ8NEZ4 4911 aaKnown RBP1.58□□□□□ -2.16
RTN4-215ENST00000491592 MT1FP04733 61 aa1.58□□□□□ -2.16
RTN4-215ENST00000491592 MT1BP07438 61 aa1.58□□□□□ -2.16
RTN4-215ENST00000491592 RYR1P21817 5038 aa1.58□□□□□ -2.16
RTN4-215ENST00000491592 MT1HP80294 61 aa1.57□□□□□ -2.16
RTN4-215ENST00000491592 KRTAP2-3P0C7H8 128 aa1.56□□□□□ -2.16
RTN4-215ENST00000491592 KRTAP2-4Q9BYR9 128 aa1.56□□□□□ -2.16
RTN4-215ENST00000491592 KRTAP2-1Q9BYU5 128 aa1.56□□□□□ -2.16
RTN4-215ENST00000491592 KRTAP19-5Q3LI72 72 aa1.52□□□□□ -2.17
RTN4-215ENST00000491592 RYR3Q15413 4870 aa1.49□□□□□ -2.17
RTN4-215ENST00000491592 CRCT1Q9UGL9 99 aa1.49□□□□□ -2.17
RTN4-215ENST00000491592 KIAA1109Q2LD37 5005 aa1.49□□□□□ -2.17
RTN4-215ENST00000491592 BIRC6Q9NR09 4857 aa1.45□□□□□ -2.18
RTN4-215ENST00000491592 MUC5BQ9HC84 5762 aaPredicted RBP1.44□□□□□ -2.18
RTN4-215ENST00000491592 KRTAP19-7Q3SYF9 63 aa1.42□□□□□ -2.18
RTN4-215ENST00000491592 MT1EP04732 61 aa1.41□□□□□ -2.18
RTN4-215ENST00000491592 MT1LQ93083 61 aa1.41□□□□□ -2.18
RTN4-215ENST00000491592 HMCN2Q8NDA2 5059 aa1.41□□□□□ -2.18
RTN4-215ENST00000491592 HERC2O95714 4834 aa1.4□□□□□ -2.18
RTN4-215ENST00000491592 ABCA13Q86UQ4 5058 aa1.39□□□□□ -2.19
RTN4-215ENST00000491592 GPR98Q8WXG9 6306 aa1.33□□□□□ -2.2
RTN4-215ENST00000491592 PCLOQ9Y6V0 5065 aa1.33□□□□□ -2.2
RTN4-215ENST00000491592 MT1AP04731 61 aa1.32□□□□□ -2.2
RTN4-215ENST00000491592 MT1GP13640 62 aa1.32□□□□□ -2.2
RTN4-215ENST00000491592 EPPK1P58107 5090 aaKnown RBP1.29□□□□□ -2.2
RTN4-215ENST00000491592 KRTAP19-3Q7Z4W3 81 aa1.28□□□□□ -2.2
RTN4-215ENST00000491592 MT1MQ8N339 61 aa1.28□□□□□ -2.2
RTN4-215ENST00000491592 AHNAKQ09666 5890 aaKnown RBP1.27□□□□□ -2.21
RTN4-215ENST00000491592 FCGBPQ9Y6R7 5405 aaPredicted RBP1.26□□□□□ -2.21
RTN4-215ENST00000491592 MUC2Q02817 5179 aa1.26□□□□□ -2.21
RTN4-215ENST00000491592 KRTAP19-6Q3LI70 58 aa1.26□□□□□ -2.21
RTN4-215ENST00000491592 UBR4Q5T4S7 5183 aa1.23□□□□□ -2.21
RTN4-215ENST00000491592 FAT4Q6V0I7 4981 aa1.23□□□□□ -2.21
RTN4-215ENST00000491592 PRM1P04553 51 aa1.22□□□□□ -2.21
RTN4-215ENST00000491592 SPRR2FQ96RM1 72 aa1.19□□□□□ -2.22
RTN4-215ENST00000491592 KRTAP6-1Q3LI64 71 aa1.17□□□□□ -2.22
RTN4-215ENST00000491592 RNF213Q63HN8 5207 aa1.14□□□□□ -2.23
RTN4-215ENST00000491592 KRTAP6-2Q3LI66 62 aa1.14□□□□□ -2.23
RTN4-215ENST00000491592 SPRR2AP35326 72 aa1.13□□□□□ -2.23
RTN4-215ENST00000491592 SPRR2EP22531 72 aa1.08□□□□□ -2.24
RTN4-215ENST00000491592 SPRR2BP35325 72 aa1.08□□□□□ -2.24
RTN4-215ENST00000491592 SSPOA2VEC9 5147 aa1.07□□□□□ -2.24
RTN4-215ENST00000491592 KMT2DO14686 5537 aa1.07□□□□□ -2.24
RTN4-215ENST00000491592 SYNE1Q8NF91 8797 aaKnown RBP1.06□□□□□ -2.24
RTN4-215ENST00000491592 USH2AO75445 5202 aa1.02□□□□□ -2.25
RTN4-215ENST00000491592 SPRR2DP22532 72 aa1.02□□□□□ -2.25
RTN4-215ENST00000491592 AHNAK2Q8IVF2 5795 aa0.97□□□□□ -2.25
RTN4-215ENST00000491592 MUC5ACP98088 5654 aa0.93□□□□□ -2.26
RTN4-215ENST00000491592 KRTAP21-1Q3LI58 79 aa0.91□□□□□ -2.26
RTN4-215ENST00000491592 MUC12Q9UKN1 5478 aa0.9□□□□□ -2.27
RTN4-215ENST00000491592 KRTAP5-10Q6L8G5 202 aa0.87□□□□□ -2.27
RTN4-215ENST00000491592 MACF1Q9UPN3 7388 aaKnown RBP0.86□□□□□ -2.27
RTN4-215ENST00000491592 KRTAP20-2Q3LI61 65 aa0.85□□□□□ -2.27
RTN4-215ENST00000491592 DSTQ03001 7570 aaKnown RBP0.84□□□□□ -2.27
RTN4-215ENST00000491592 KRTAP20-1Q3LI63 56 aa0.83□□□□□ -2.28
RTN4-215ENST00000491592 FSIP2Q5CZC0 6907 aa0.82□□□□□ -2.28
RTN4-215ENST00000491592 MUC16Q8WXI7 14507 aa0.81□□□□□ -2.28
RTN4-215ENST00000491592 NEBP20929 6669 aa0.81□□□□□ -2.28
RTN4-215ENST00000491592 SYNE2Q8WXH0 6885 aaKnown RBP0.81□□□□□ -2.28
RTN4-215ENST00000491592 MT4P47944 62 aa0.79□□□□□ -2.28
RTN4-215ENST00000491592 MDN1Q9NU22 5596 aa0.77□□□□□ -2.29
RTN4-215ENST00000491592 PHGR1C9JFL3 82 aa0.58□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 83.4 ms