RNA–Protein interactions for RNA: ENST00000491292.5

ERCC3-208, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 4,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-208ENST00000491292 LCE2DQ5TA82 110 aaPredicted RBP3.29□□□□□ -1.88
ERCC3-208ENST00000491292 KRTAP19-7Q3SYF9 63 aa3.28□□□□□ -1.89
ERCC3-208ENST00000491292 KRTAP4-3Q9BYR4 195 aa3.28□□□□□ -1.89
ERCC3-208ENST00000491292 MT1LQ93083 61 aa3.26□□□□□ -1.89
ERCC3-208ENST00000491292 KRTAP2-3P0C7H8 128 aa3.25□□□□□ -1.89
ERCC3-208ENST00000491292 KRTAP2-4Q9BYR9 128 aa3.25□□□□□ -1.89
ERCC3-208ENST00000491292 KRTAP2-1Q9BYU5 128 aa3.25□□□□□ -1.89
ERCC3-208ENST00000491292 MT1EP04732 61 aa3.21□□□□□ -1.9
ERCC3-208ENST00000491292 LCE3BQ5TA77 95 aa3.2□□□□□ -1.9
ERCC3-208ENST00000491292 MUC12Q9UKN1 5478 aa3.16□□□□□ -1.9
ERCC3-208ENST00000491292 KRTAP9-2Q9BYQ4 174 aa3.15□□□□□ -1.91
ERCC3-208ENST00000491292 KRTAP4-9Q9BYQ8 210 aa3.12□□□□□ -1.91
ERCC3-208ENST00000491292 SPRR2FQ96RM1 72 aa3.11□□□□□ -1.91
ERCC3-208ENST00000491292 SSPOA2VEC9 5147 aa3.1□□□□□ -1.91
ERCC3-208ENST00000491292 KRTAP19-6Q3LI70 58 aa3.08□□□□□ -1.92
ERCC3-208ENST00000491292 SYNE2Q8WXH0 6885 aaKnown RBP3.04□□□□□ -1.92
ERCC3-208ENST00000491292 KRTAP19-4Q3LI73 84 aa3.03□□□□□ -1.93
ERCC3-208ENST00000491292 MT1MQ8N339 61 aa3.03□□□□□ -1.93
ERCC3-208ENST00000491292 KRTAP19-3Q7Z4W3 81 aa3.01□□□□□ -1.93
ERCC3-208ENST00000491292 LCE3DQ9BYE3 92 aa2.96□□□□□ -1.94
ERCC3-208ENST00000491292 PRM1P04553 51 aa2.94□□□□□ -1.94
ERCC3-208ENST00000491292 MACF1Q9UPN3 7388 aaKnown RBP2.93□□□□□ -1.94
ERCC3-208ENST00000491292 LCE3EQ5T5B0 92 aa2.92□□□□□ -1.94
ERCC3-208ENST00000491292 SPRR2EP22531 72 aa2.9□□□□□ -1.94
ERCC3-208ENST00000491292 SPRR2BP35325 72 aa2.9□□□□□ -1.94
ERCC3-208ENST00000491292 SPRR2AP35326 72 aa2.9□□□□□ -1.94
ERCC3-208ENST00000491292 KRTAP9-7A8MTY7 169 aa2.9□□□□□ -1.95
ERCC3-208ENST00000491292 KRTAP9-6A0A140TA67 174 aa2.89□□□□□ -1.95
ERCC3-208ENST00000491292 KRTAP6-1Q3LI64 71 aa2.83□□□□□ -1.96
ERCC3-208ENST00000491292 SPRR2DP22532 72 aa2.78□□□□□ -1.96
ERCC3-208ENST00000491292 MUC19Q7Z5P9 8384 aa2.78□□□□□ -1.96
ERCC3-208ENST00000491292 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.77□□□□□ -1.97
ERCC3-208ENST00000491292 LCE5AQ5TCM9 118 aa2.74□□□□□ -1.97
ERCC3-208ENST00000491292 MT1AP04731 61 aa2.71□□□□□ -1.98
ERCC3-208ENST00000491292 KRTAP6-2Q3LI66 62 aa2.71□□□□□ -1.98
ERCC3-208ENST00000491292 MDN1Q9NU22 5596 aa2.7□□□□□ -1.98
ERCC3-208ENST00000491292 LCE1AQ5T7P2 110 aa2.68□□□□□ -1.98
ERCC3-208ENST00000491292 KRTAP6-3Q3LI67 103 aa2.66□□□□□ -1.98
ERCC3-208ENST00000491292 KRTAP5-5Q701N2 237 aaPredicted RBP2.64□□□□□ -1.99
ERCC3-208ENST00000491292 KRTAP5-9P26371 169 aa2.58□□□□□ -2
ERCC3-208ENST00000491292 MT3P25713 68 aa2.54□□□□□ -2
ERCC3-208ENST00000491292 MT4P47944 62 aa2.52□□□□□ -2.01
ERCC3-208ENST00000491292 KRTAP9-4Q9BYQ2 154 aa2.52□□□□□ -2.01
ERCC3-208ENST00000491292 KRTAP2-2Q9BYT5 123 aa2.48□□□□□ -2.01
ERCC3-208ENST00000491292 KRTAP4-6Q9BYQ5 205 aa2.47□□□□□ -2.01
ERCC3-208ENST00000491292 NEBP20929 6669 aa2.45□□□□□ -2.02
ERCC3-208ENST00000491292 KRTAP20-1Q3LI63 56 aa2.43□□□□□ -2.02
ERCC3-208ENST00000491292 LCE1DQ5T752 114 aa2.36□□□□□ -2.03
ERCC3-208ENST00000491292 LCE1FQ5T754 118 aa2.35□□□□□ -2.03
ERCC3-208ENST00000491292 LCE1EQ5T753 118 aa2.34□□□□□ -2.04
ERCC3-208ENST00000491292 LCE1BQ5T7P3 118 aa2.33□□□□□ -2.04
ERCC3-208ENST00000491292 LCE4AQ5TA78 99 aa2.27□□□□□ -2.05
ERCC3-208ENST00000491292 KRTAP4-11Q9BYQ6 195 aa2.26□□□□□ -2.05
ERCC3-208ENST00000491292 KRTAP20-2Q3LI61 65 aa2.17□□□□□ -2.06
ERCC3-208ENST00000491292 KRTAP9-9Q9BYP9 154 aa2.16□□□□□ -2.06
ERCC3-208ENST00000491292 HMCN1Q96RW7 5635 aa2.13□□□□□ -2.07
ERCC3-208ENST00000491292 KRTAP5-4Q6L8H1 288 aa2.11□□□□□ -2.07
ERCC3-208ENST00000491292 MUC5ACP98088 5654 aa2.1□□□□□ -2.07
ERCC3-208ENST00000491292 KRTAP4-12Q9BQ66 201 aa1.98□□□□□ -2.09
ERCC3-208ENST00000491292 KRTAP4-4Q9BYR3 166 aa1.95□□□□□ -2.1
ERCC3-208ENST00000491292 KRTAP5-2Q701N4 177 aa1.95□□□□□ -2.1
ERCC3-208ENST00000491292 GPR98Q8WXG9 6306 aa1.95□□□□□ -2.1
ERCC3-208ENST00000491292 KRTAP5-3Q6L8H2 238 aa1.92□□□□□ -2.1
ERCC3-208ENST00000491292 KRTAP5-10Q6L8G5 202 aa1.92□□□□□ -2.1
ERCC3-208ENST00000491292 KRTAP4-2Q9BYR5 136 aa1.88□□□□□ -2.11
ERCC3-208ENST00000491292 AHNAK2Q8IVF2 5795 aa1.83□□□□□ -2.12
ERCC3-208ENST00000491292 KRTAP5-8O75690 187 aa1.74□□□□□ -2.13
ERCC3-208ENST00000491292 KRTAP5-1Q6L8H4 278 aa1.69□□□□□ -2.14
ERCC3-208ENST00000491292 LCE1CQ5T751 118 aa1.69□□□□□ -2.14
ERCC3-208ENST00000491292 MUC5BQ9HC84 5762 aaPredicted RBP1.67□□□□□ -2.14
ERCC3-208ENST00000491292 KRTAP21-2Q3LI59 83 aa1.66□□□□□ -2.14
ERCC3-208ENST00000491292 KRTAP5-7Q6L8G8 165 aa1.64□□□□□ -2.15
ERCC3-208ENST00000491292 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.61□□□□□ -2.15
ERCC3-208ENST00000491292 KRTAP21-1Q3LI58 79 aa1.59□□□□□ -2.15
ERCC3-208ENST00000491292 AHNAKQ09666 5890 aaKnown RBP1.47□□□□□ -2.17
ERCC3-208ENST00000491292 KRTAP5-11Q6L8G4 156 aa1.45□□□□□ -2.18
ERCC3-208ENST00000491292 PHGR1C9JFL3 82 aa1.25□□□□□ -2.21
ERCC3-208ENST00000491292 MUC16Q8WXI7 14507 aa0.88□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 121.1 ms