RNA–Protein interactions for RNA: ENST00000491136.6

CC2D1B-209, Transcript of coiled-coil and C2 domain containing 1B, humanhuman

TSL 1 (best)

Gene CC2D1B, Length 4,335 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CC2D1B-209ENST00000491136 MT1GP13640 62 aa3.71□□□□□ -1.81
CC2D1B-209ENST00000491136 SYNE2Q8WXH0 6885 aaKnown RBP3.69□□□□□ -1.82
CC2D1B-209ENST00000491136 SPRR5A0A1B0GTR4 108 aa3.69□□□□□ -1.82
CC2D1B-209ENST00000491136 MT1EP04732 61 aa3.67□□□□□ -1.82
CC2D1B-209ENST00000491136 KRTAP19-4Q3LI73 84 aa3.66□□□□□ -1.82
CC2D1B-209ENST00000491136 LCE2DQ5TA82 110 aaPredicted RBP3.66□□□□□ -1.82
CC2D1B-209ENST00000491136 MT1LQ93083 61 aa3.65□□□□□ -1.82
CC2D1B-209ENST00000491136 KMT2DO14686 5537 aa3.63□□□□□ -1.83
CC2D1B-209ENST00000491136 KRTAP19-3Q7Z4W3 81 aa3.63□□□□□ -1.83
CC2D1B-209ENST00000491136 SPRR2DP22532 72 aa3.62□□□□□ -1.83
CC2D1B-209ENST00000491136 KRTAP19-7Q3SYF9 63 aa3.59□□□□□ -1.83
CC2D1B-209ENST00000491136 MACF1Q9UPN3 7388 aaKnown RBP3.59□□□□□ -1.83
CC2D1B-209ENST00000491136 KRTAP4-3Q9BYR4 195 aa3.58□□□□□ -1.84
CC2D1B-209ENST00000491136 KRTAP9-7A8MTY7 169 aa3.56□□□□□ -1.84
CC2D1B-209ENST00000491136 LCE3BQ5TA77 95 aa3.56□□□□□ -1.84
CC2D1B-209ENST00000491136 FCGBPQ9Y6R7 5405 aaPredicted RBP3.55□□□□□ -1.84
CC2D1B-209ENST00000491136 KRTAP12-4P60329 112 aa3.53□□□□□ -1.84
CC2D1B-209ENST00000491136 MT1MQ8N339 61 aa3.52□□□□□ -1.85
CC2D1B-209ENST00000491136 LOC100996750A0A140TA64 210 aa3.5□□□□□ -1.85
CC2D1B-209ENST00000491136 SSPOA2VEC9 5147 aa3.5□□□□□ -1.85
CC2D1B-209ENST00000491136 MUC12Q9UKN1 5478 aa3.44□□□□□ -1.86
CC2D1B-209ENST00000491136 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.38□□□□□ -1.87
CC2D1B-209ENST00000491136 MT4P47944 62 aa3.33□□□□□ -1.88
CC2D1B-209ENST00000491136 KRTAP9-6A8MVA2 160 aa3.31□□□□□ -1.88
CC2D1B-209ENST00000491136 KRTAP20-1Q3LI63 56 aa3.29□□□□□ -1.88
CC2D1B-209ENST00000491136 LCE1AQ5T7P2 110 aa3.27□□□□□ -1.89
CC2D1B-209ENST00000491136 LCE5AQ5TCM9 118 aa3.25□□□□□ -1.89
CC2D1B-209ENST00000491136 MDN1Q9NU22 5596 aa3.25□□□□□ -1.89
CC2D1B-209ENST00000491136 KRTAP6-3Q3LI67 103 aa3.24□□□□□ -1.89
CC2D1B-209ENST00000491136 LCE3DQ9BYE3 92 aa3.24□□□□□ -1.89
CC2D1B-209ENST00000491136 LCE3EQ5T5B0 92 aa3.18□□□□□ -1.9
CC2D1B-209ENST00000491136 KRTAP4-9Q9BYQ8 210 aa3.17□□□□□ -1.9
CC2D1B-209ENST00000491136 GPR98Q8WXG9 6306 aa3.15□□□□□ -1.91
CC2D1B-209ENST00000491136 MT1AP04731 61 aa3.15□□□□□ -1.91
CC2D1B-209ENST00000491136 KRTAP6-1Q3LI64 71 aa3.12□□□□□ -1.91
CC2D1B-209ENST00000491136 MT3P25713 68 aa3.11□□□□□ -1.91
CC2D1B-209ENST00000491136 PRM1P04553 51 aa3.11□□□□□ -1.91
CC2D1B-209ENST00000491136 KRTAP2-3P0C7H8 128 aa3.1□□□□□ -1.91
CC2D1B-209ENST00000491136 KRTAP2-4Q9BYR9 128 aa3.1□□□□□ -1.91
CC2D1B-209ENST00000491136 KRTAP2-1Q9BYU5 128 aa3.1□□□□□ -1.91
CC2D1B-209ENST00000491136 KRTAP5-9P26371 169 aa3.03□□□□□ -1.92
CC2D1B-209ENST00000491136 NEBP20929 6669 aa3.02□□□□□ -1.93
CC2D1B-209ENST00000491136 KRTAP2-2Q9BYT5 123 aa3.01□□□□□ -1.93
CC2D1B-209ENST00000491136 KRTAP6-2Q3LI66 62 aa2.99□□□□□ -1.93
CC2D1B-209ENST00000491136 LCE1DQ5T752 114 aa2.96□□□□□ -1.94
CC2D1B-209ENST00000491136 LCE1BQ5T7P3 118 aa2.93□□□□□ -1.94
CC2D1B-209ENST00000491136 KRTAP9-4Q9BYQ2 154 aa2.92□□□□□ -1.94
CC2D1B-209ENST00000491136 MUC19Q7Z5P9 8384 aa2.89□□□□□ -1.95
CC2D1B-209ENST00000491136 LCE4AQ5TA78 99 aa2.87□□□□□ -1.95
CC2D1B-209ENST00000491136 KRTAP4-6Q9BYQ5 205 aa2.81□□□□□ -1.96
CC2D1B-209ENST00000491136 KRTAP20-2Q3LI61 65 aa2.66□□□□□ -1.98
CC2D1B-209ENST00000491136 KRTAP5-5Q701N2 237 aaPredicted RBP2.59□□□□□ -1.99
CC2D1B-209ENST00000491136 LCE1EQ5T753 118 aa2.5□□□□□ -2.01
CC2D1B-209ENST00000491136 KRTAP9-9Q9BYP9 154 aa2.48□□□□□ -2.01
CC2D1B-209ENST00000491136 LCE1CQ5T751 118 aa2.48□□□□□ -2.01
CC2D1B-209ENST00000491136 LCE1FQ5T754 118 aa2.48□□□□□ -2.01
CC2D1B-209ENST00000491136 MUC5ACP98088 5654 aa2.46□□□□□ -2.02
CC2D1B-209ENST00000491136 KRTAP5-4Q6L8H1 288 aa2.44□□□□□ -2.02
CC2D1B-209ENST00000491136 HMCN1Q96RW7 5635 aa2.44□□□□□ -2.02
CC2D1B-209ENST00000491136 KRTAP4-11Q9BYQ6 195 aa2.37□□□□□ -2.03
CC2D1B-209ENST00000491136 AHNAK2Q8IVF2 5795 aa2.32□□□□□ -2.04
CC2D1B-209ENST00000491136 KRTAP5-3Q6L8H2 238 aa2.29□□□□□ -2.04
CC2D1B-209ENST00000491136 KRTAP4-12Q9BQ66 201 aa2.27□□□□□ -2.05
CC2D1B-209ENST00000491136 KRTAP4-2Q9BYR5 136 aa2.27□□□□□ -2.05
CC2D1B-209ENST00000491136 KRTAP4-4Q9BYR3 166 aa2.21□□□□□ -2.06
CC2D1B-209ENST00000491136 KRTAP5-2Q701N4 177 aa2.18□□□□□ -2.06
CC2D1B-209ENST00000491136 KRTAP5-8O75690 187 aa2.1□□□□□ -2.07
CC2D1B-209ENST00000491136 MUC5BQ9HC84 5762 aaPredicted RBP2.03□□□□□ -2.08
CC2D1B-209ENST00000491136 AHNAKQ09666 5890 aaKnown RBP2□□□□□ -2.09
CC2D1B-209ENST00000491136 KRTAP5-1Q6L8H4 278 aa1.95□□□□□ -2.1
CC2D1B-209ENST00000491136 KRTAP5-10Q6L8G5 202 aa1.91□□□□□ -2.1
CC2D1B-209ENST00000491136 KRTAP5-7Q6L8G8 165 aa1.78□□□□□ -2.12
CC2D1B-209ENST00000491136 PHGR1C9JFL3 82 aa1.77□□□□□ -2.13
CC2D1B-209ENST00000491136 KRTAP21-2Q3LI59 83 aa1.77□□□□□ -2.13
CC2D1B-209ENST00000491136 KRTAP5-11Q6L8G4 156 aa1.75□□□□□ -2.13
CC2D1B-209ENST00000491136 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.69□□□□□ -2.14
CC2D1B-209ENST00000491136 KRTAP21-1Q3LI58 79 aa1.4□□□□□ -2.18
CC2D1B-209ENST00000491136 MUC16Q8WXI7 14507 aa1.03□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 107.8 ms