RNA–Protein interactions for RNA: ENST00000491062.5

FXR1-220, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 2 BASIC

Gene FXR1, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-220ENST00000491062 LCE1EQ5T753 118 aa4.91□□□□□ -1.62
FXR1-220ENST00000491062 RNF213Q63HN8 5207 aa4.91□□□□□ -1.62
FXR1-220ENST00000491062 MT1BP07438 61 aa4.91□□□□□ -1.62
FXR1-220ENST00000491062 KRTAP10-5P60370 271 aa4.89□□□□□ -1.63
FXR1-220ENST00000491062 MT1XP80297 61 aa4.88□□□□□ -1.63
FXR1-220ENST00000491062 LCE3CQ5T5A8 94 aa4.88□□□□□ -1.63
FXR1-220ENST00000491062 KRTAP5-11Q6L8G4 156 aa4.85□□□□□ -1.63
FXR1-220ENST00000491062 UBR4Q5T4S7 5183 aa4.82□□□□□ -1.64
FXR1-220ENST00000491062 KRTAP12-3P60328 96 aa4.78□□□□□ -1.64
FXR1-220ENST00000491062 PRO2289Q9P1D8 64 aa4.69□□□□□ -1.66
FXR1-220ENST00000491062 INE1O15225 51 aa4.61□□□□□ -1.67
FXR1-220ENST00000491062 KRTAP19-5Q3LI72 72 aa4.54□□□□□ -1.68
FXR1-220ENST00000491062 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.52□□□□□ -1.69
FXR1-220ENST00000491062 KRTAP9-6A8MVA2 160 aa4.5□□□□□ -1.69
FXR1-220ENST00000491062 LCE3EQ5T5B0 92 aa4.47□□□□□ -1.69
FXR1-220ENST00000491062 KRTAP19-7Q3SYF9 63 aa4.35□□□□□ -1.71
FXR1-220ENST00000491062 KRTAP2-3P0C7H8 128 aa4.27□□□□□ -1.73
FXR1-220ENST00000491062 KRTAP2-4Q9BYR9 128 aa4.27□□□□□ -1.73
FXR1-220ENST00000491062 KRTAP2-1Q9BYU5 128 aa4.27□□□□□ -1.73
FXR1-220ENST00000491062 MT1LQ93083 61 aa4.24□□□□□ -1.73
FXR1-220ENST00000491062 USH2AO75445 5202 aa4.23□□□□□ -1.73
FXR1-220ENST00000491062 MT1EP04732 61 aa4.23□□□□□ -1.73
FXR1-220ENST00000491062 KMT2DO14686 5537 aa4.22□□□□□ -1.73
FXR1-220ENST00000491062 SSPOA2VEC9 5147 aa4.12□□□□□ -1.75
FXR1-220ENST00000491062 KRTAP19-6Q3LI70 58 aa4.11□□□□□ -1.75
FXR1-220ENST00000491062 KRTAP5-1Q6L8H4 278 aa4.03□□□□□ -1.76
FXR1-220ENST00000491062 MT1MQ8N339 61 aa3.94□□□□□ -1.78
FXR1-220ENST00000491062 KRTAP19-3Q7Z4W3 81 aa3.94□□□□□ -1.78
FXR1-220ENST00000491062 MT1GP13640 62 aa3.92□□□□□ -1.78
FXR1-220ENST00000491062 KRTAP4-3Q9BYR4 195 aa3.92□□□□□ -1.78
FXR1-220ENST00000491062 KRTAP4-4Q9BYR3 166 aa3.81□□□□□ -1.8
FXR1-220ENST00000491062 FCGBPQ9Y6R7 5405 aaPredicted RBP3.78□□□□□ -1.8
FXR1-220ENST00000491062 CRCT1Q9UGL9 99 aa3.74□□□□□ -1.81
FXR1-220ENST00000491062 KRTAP5-4Q6L8H1 288 aa3.74□□□□□ -1.81
FXR1-220ENST00000491062 LCE3DQ9BYE3 92 aa3.73□□□□□ -1.81
FXR1-220ENST00000491062 MUC12Q9UKN1 5478 aa3.71□□□□□ -1.82
FXR1-220ENST00000491062 KRTAP12-4P60329 112 aa3.71□□□□□ -1.82
FXR1-220ENST00000491062 SPRR2FQ96RM1 72 aa3.69□□□□□ -1.82
FXR1-220ENST00000491062 OBSCNQ5VST9 7968 aa3.63□□□□□ -1.83
FXR1-220ENST00000491062 MT1AP04731 61 aa3.63□□□□□ -1.83
FXR1-220ENST00000491062 FSIP2Q5CZC0 6907 aa3.59□□□□□ -1.83
FXR1-220ENST00000491062 KRTAP6-1Q3LI64 71 aa3.57□□□□□ -1.84
FXR1-220ENST00000491062 KRTAP5-9P26371 169 aa3.54□□□□□ -1.84
FXR1-220ENST00000491062 KRTAP5-5Q701N2 237 aaPredicted RBP3.53□□□□□ -1.84
FXR1-220ENST00000491062 MACF1Q9UPN3 7388 aaKnown RBP3.41□□□□□ -1.86
FXR1-220ENST00000491062 DSTQ03001 7570 aaKnown RBP3.4□□□□□ -1.86
FXR1-220ENST00000491062 SPRR2EP22531 72 aa3.35□□□□□ -1.87
FXR1-220ENST00000491062 SPRR2BP35325 72 aa3.35□□□□□ -1.87
FXR1-220ENST00000491062 SPRR2AP35326 72 aa3.35□□□□□ -1.87
FXR1-220ENST00000491062 SYNE1Q8NF91 8797 aaKnown RBP3.35□□□□□ -1.87
FXR1-220ENST00000491062 PRM1P04553 51 aa3.3□□□□□ -1.88
FXR1-220ENST00000491062 MDN1Q9NU22 5596 aa3.29□□□□□ -1.88
FXR1-220ENST00000491062 LCE1CQ5T751 118 aa3.27□□□□□ -1.89
FXR1-220ENST00000491062 LCE1BQ5T7P3 118 aa3.27□□□□□ -1.89
FXR1-220ENST00000491062 SPRR2DP22532 72 aa3.21□□□□□ -1.9
FXR1-220ENST00000491062 KRTAP6-2Q3LI66 62 aa3.21□□□□□ -1.9
FXR1-220ENST00000491062 SYNE2Q8WXH0 6885 aaKnown RBP3.19□□□□□ -1.9
FXR1-220ENST00000491062 KRTAP6-3Q3LI67 103 aa3.17□□□□□ -1.9
FXR1-220ENST00000491062 NEBP20929 6669 aa3.16□□□□□ -1.9
FXR1-220ENST00000491062 KRTAP20-1Q3LI63 56 aa3.07□□□□□ -1.92
FXR1-220ENST00000491062 HMCN1Q96RW7 5635 aa3.07□□□□□ -1.92
FXR1-220ENST00000491062 KRTAP5-2Q701N4 177 aa3□□□□□ -1.93
FXR1-220ENST00000491062 GPR98Q8WXG9 6306 aa2.89□□□□□ -1.95
FXR1-220ENST00000491062 KRTAP20-2Q3LI61 65 aa2.83□□□□□ -1.96
FXR1-220ENST00000491062 MT4P47944 62 aa2.78□□□□□ -1.96
FXR1-220ENST00000491062 KRTAP5-7Q6L8G8 165 aa2.77□□□□□ -1.97
FXR1-220ENST00000491062 MUC19Q7Z5P9 8384 aa2.65□□□□□ -1.99
FXR1-220ENST00000491062 MUC5ACP98088 5654 aa2.64□□□□□ -1.99
FXR1-220ENST00000491062 KRTAP5-10Q6L8G5 202 aa2.56□□□□□ -2
FXR1-220ENST00000491062 AHNAK2Q8IVF2 5795 aa2.48□□□□□ -2.01
FXR1-220ENST00000491062 KRTAP5-8O75690 187 aa2.41□□□□□ -2.02
FXR1-220ENST00000491062 KRTAP21-2Q3LI59 83 aa2.34□□□□□ -2.03
FXR1-220ENST00000491062 AHNAKQ09666 5890 aaKnown RBP2.29□□□□□ -2.04
FXR1-220ENST00000491062 MUC5BQ9HC84 5762 aaPredicted RBP2.18□□□□□ -2.06
FXR1-220ENST00000491062 KRTAP21-1Q3LI58 79 aa2.13□□□□□ -2.07
FXR1-220ENST00000491062 PHGR1C9JFL3 82 aa1.82□□□□□ -2.12
FXR1-220ENST00000491062 MUC16Q8WXI7 14507 aa1.27□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 67 ms