RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 MIR22HGQ0VDD5 57 aa5.32□□□□□ -1.56
COL27A1-206ENST00000490831 V9GYY9 64 aa5.28□□□□□ -1.56
COL27A1-206ENST00000490831 KRTAP12-3P60328 96 aa5.26□□□□□ -1.57
COL27A1-206ENST00000490831 Q1T7F1 81 aa5.26□□□□□ -1.57
COL27A1-206ENST00000490831 KRTAP4-9Q9BYQ8 210 aa5.26□□□□□ -1.57
COL27A1-206ENST00000490831 KRTAP25-1Q3LHN0 102 aa5.23□□□□□ -1.57
COL27A1-206ENST00000490831 KRTAP4-3Q9BYR4 195 aa5.23□□□□□ -1.57
COL27A1-206ENST00000490831 PSPHP1O15172 72 aa5.22□□□□□ -1.57
COL27A1-206ENST00000490831 LCE4AQ5TA78 99 aa5.21□□□□□ -1.58
COL27A1-206ENST00000490831 K7ERS5 55 aa5.2□□□□□ -1.58
COL27A1-206ENST00000490831 LCE1DQ5T752 114 aa5.18□□□□□ -1.58
COL27A1-206ENST00000490831 LOC100996750A0A140TA64 210 aa5.17□□□□□ -1.58
COL27A1-206ENST00000490831 KRTAP4-6Q9BYQ5 205 aa5.17□□□□□ -1.58
COL27A1-206ENST00000490831 KRTAP5-4Q6L8H1 288 aa5.15□□□□□ -1.59
COL27A1-206ENST00000490831 KRTAP4-7Q9BYR0 210 aa5.13□□□□□ -1.59
COL27A1-206ENST00000490831 HMCN1Q96RW7 5635 aa5.13□□□□□ -1.59
COL27A1-206ENST00000490831 MT4P47944 62 aa5.09□□□□□ -1.59
COL27A1-206ENST00000490831 KRTAP23-1A1A580 65 aa5.08□□□□□ -1.6
COL27A1-206ENST00000490831 GPR98Q8WXG9 6306 aa5.07□□□□□ -1.6
COL27A1-206ENST00000490831 A6NED7 52 aa5.04□□□□□ -1.6
COL27A1-206ENST00000490831 KRTAP19-4Q3LI73 84 aa5.04□□□□□ -1.6
COL27A1-206ENST00000490831 RPS28P62857 69 aaKnown RBP5.02□□□□□ -1.61
COL27A1-206ENST00000490831 KRTAP5-5Q701N2 237 aaPredicted RBP4.98□□□□□ -1.61
COL27A1-206ENST00000490831 CDC42SE1Q9NRR8 79 aa4.94□□□□□ -1.62
COL27A1-206ENST00000490831 KRTAP15-1Q3LI76 137 aa4.93□□□□□ -1.62
COL27A1-206ENST00000490831 AHNAK2Q8IVF2 5795 aa4.93□□□□□ -1.62
COL27A1-206ENST00000490831 ROMO1P60602 79 aa4.87□□□□□ -1.63
COL27A1-206ENST00000490831 LCE3CQ5T5A8 94 aa4.86□□□□□ -1.63
COL27A1-206ENST00000490831 SPRR5A0A1B0GTR4 108 aa4.84□□□□□ -1.63
COL27A1-206ENST00000490831 KRTAP20-2Q3LI61 65 aa4.83□□□□□ -1.64
COL27A1-206ENST00000490831 KRTAP5-10Q6L8G5 202 aa4.82□□□□□ -1.64
COL27A1-206ENST00000490831 KRTAP12-4P60329 112 aa4.79□□□□□ -1.64
COL27A1-206ENST00000490831 SYNE1Q8NF91 8797 aaKnown RBP4.75□□□□□ -1.65
COL27A1-206ENST00000490831 KRTAP5-3Q6L8H2 238 aa4.71□□□□□ -1.66
COL27A1-206ENST00000490831 MT1AP04731 61 aa4.63□□□□□ -1.67
COL27A1-206ENST00000490831 KRTAP5-7Q6L8G8 165 aa4.63□□□□□ -1.67
COL27A1-206ENST00000490831 KRTAP9-6A8MVA2 160 aa4.59□□□□□ -1.67
COL27A1-206ENST00000490831 KRTAP6-1Q3LI64 71 aa4.58□□□□□ -1.68
COL27A1-206ENST00000490831 KRTAP5-2Q701N4 177 aa4.53□□□□□ -1.68
COL27A1-206ENST00000490831 KRTAP9-4Q9BYQ2 154 aa4.46□□□□□ -1.7
COL27A1-206ENST00000490831 BRK1Q8WUW1 75 aa4.44□□□□□ -1.7
COL27A1-206ENST00000490831 PRO0628Q9UI54 55 aa4.42□□□□□ -1.7
COL27A1-206ENST00000490831 KRTAP4-11Q9BYQ6 195 aa4.4□□□□□ -1.71
COL27A1-206ENST00000490831 KRTAP6-2Q3LI66 62 aa4.36□□□□□ -1.71
COL27A1-206ENST00000490831 KRTAP9-9Q9BYP9 154 aa4.34□□□□□ -1.71
COL27A1-206ENST00000490831 KRTAP4-12Q9BQ66 201 aa4.32□□□□□ -1.72
COL27A1-206ENST00000490831 KRTAP5-8O75690 187 aa4.26□□□□□ -1.73
COL27A1-206ENST00000490831 SVIPQ8NHG7 77 aa4.23□□□□□ -1.73
COL27A1-206ENST00000490831 MT3P25713 68 aa4.22□□□□□ -1.73
COL27A1-206ENST00000490831 PMAIP1Q13794 54 aa4.2□□□□□ -1.74
COL27A1-206ENST00000490831 OBSCNQ5VST9 7968 aa4.13□□□□□ -1.75
COL27A1-206ENST00000490831 KTN1-AS1Q86SY8 53 aa4.08□□□□□ -1.76
COL27A1-206ENST00000490831 MUC5BQ9HC84 5762 aaPredicted RBP4.05□□□□□ -1.76
COL27A1-206ENST00000490831 KRTAP5-1Q6L8H4 278 aa4.04□□□□□ -1.76
COL27A1-206ENST00000490831 MUC5ACP98088 5654 aa4.03□□□□□ -1.76
COL27A1-206ENST00000490831 AHNAKQ09666 5890 aaKnown RBP4.03□□□□□ -1.76
COL27A1-206ENST00000490831 KRTAP4-2Q9BYR5 136 aa4.02□□□□□ -1.77
COL27A1-206ENST00000490831 H3BS24 57 aa4□□□□□ -1.77
COL27A1-206ENST00000490831 PRAC1Q96KF2 57 aa3.93□□□□□ -1.78
COL27A1-206ENST00000490831 LCE1EQ5T753 118 aa3.9□□□□□ -1.79
COL27A1-206ENST00000490831 LCE1CQ5T751 118 aa3.62□□□□□ -1.83
COL27A1-206ENST00000490831 LCE1BQ5T7P3 118 aa3.62□□□□□ -1.83
COL27A1-206ENST00000490831 LCE3DQ9BYE3 92 aa3.5□□□□□ -1.85
COL27A1-206ENST00000490831 LUZP6Q538Z0 58 aa3.31□□□□□ -1.88
COL27A1-206ENST00000490831 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.31□□□□□ -1.88
COL27A1-206ENST00000490831 LCE3EQ5T5B0 92 aa3.3□□□□□ -1.88
COL27A1-206ENST00000490831 KRTAP5-11Q6L8G4 156 aa3.28□□□□□ -1.88
COL27A1-206ENST00000490831 A0A0A0MQY5 61 aa3.23□□□□□ -1.89
COL27A1-206ENST00000490831 LCE1FQ5T754 118 aa3.18□□□□□ -1.9
COL27A1-206ENST00000490831 NDUFAF8A1L188 74 aa3.16□□□□□ -1.9
COL27A1-206ENST00000490831 KRTAP21-2Q3LI59 83 aa3.04□□□□□ -1.92
COL27A1-206ENST00000490831 PHGR1C9JFL3 82 aa2.82□□□□□ -1.96
COL27A1-206ENST00000490831 KRTAP4-4Q9BYR3 166 aa2.72□□□□□ -1.97
COL27A1-206ENST00000490831 INE1O15225 51 aa2.64□□□□□ -1.99
COL27A1-206ENST00000490831 MUC19Q7Z5P9 8384 aa2.54□□□□□ -2
COL27A1-206ENST00000490831 PRM1P04553 51 aa2.48□□□□□ -2.01
COL27A1-206ENST00000490831 KRTAP21-1Q3LI58 79 aa2.12□□□□□ -2.07
COL27A1-206ENST00000490831 MUC16Q8WXI7 14507 aa1.88□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 150.9 ms