RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 ATOX1O00244 68 aa2.12□□□□□ -2.07
PDLIM1-203ENST00000490391 KRTAP6-1Q3LI64 71 aa2.11□□□□□ -2.07
PDLIM1-203ENST00000490391 TSTD3H0UI37 97 aa2.1□□□□□ -2.07
PDLIM1-203ENST00000490391 S100A1P23297 94 aa2.1□□□□□ -2.07
PDLIM1-203ENST00000490391 KRTAP6-2Q3LI66 62 aa2.1□□□□□ -2.07
PDLIM1-203ENST00000490391 DMAC1Q96GE9 116 aa2.09□□□□□ -2.07
PDLIM1-203ENST00000490391 UQCRQO14949 82 aa2.08□□□□□ -2.08
PDLIM1-203ENST00000490391 MT1AP04731 61 aa2.07□□□□□ -2.08
PDLIM1-203ENST00000490391 KRTAP21-2Q3LI59 83 aa2.07□□□□□ -2.08
PDLIM1-203ENST00000490391 UQCR10Q9UDW1 63 aa2.07□□□□□ -2.08
PDLIM1-203ENST00000490391 KRTAP12-3P60328 96 aa2.05□□□□□ -2.08
PDLIM1-203ENST00000490391 LINC00208Q96KT6 92 aa2.05□□□□□ -2.08
PDLIM1-203ENST00000490391 TAX1BP3O14907 124 aa2.03□□□□□ -2.08
PDLIM1-203ENST00000490391 SMIM26A0A096LP01 95 aa2.02□□□□□ -2.09
PDLIM1-203ENST00000490391 PYY3Q5JQD4 70 aa2.02□□□□□ -2.09
PDLIM1-203ENST00000490391 TRAV7A0A075B6U4 112 aa2□□□□□ -2.09
PDLIM1-203ENST00000490391 LCE3DQ9BYE3 92 aa2□□□□□ -2.09
PDLIM1-203ENST00000490391 M0R143 59 aa1.97□□□□□ -2.09
PDLIM1-203ENST00000490391 KRTAP12-1P59990 96 aa1.95□□□□□ -2.1
PDLIM1-203ENST00000490391 SPINT4Q6UDR6 99 aa1.95□□□□□ -2.1
PDLIM1-203ENST00000490391 TNP1P09430 55 aa1.94□□□□□ -2.1
PDLIM1-203ENST00000490391 MP68P56378 58 aa1.93□□□□□ -2.1
PDLIM1-203ENST00000490391 SPTSSBQ8NFR3 76 aa1.93□□□□□ -2.1
PDLIM1-203ENST00000490391 ACYP2P14621 99 aa1.89□□□□□ -2.11
PDLIM1-203ENST00000490391 HIST1H4AP62805 103 aaKnown RBP1.87□□□□□ -2.11
PDLIM1-203ENST00000490391 LUZP6Q538Z0 58 aa1.87□□□□□ -2.11
PDLIM1-203ENST00000490391 SPATA8Q6RVD6 105 aa1.87□□□□□ -2.11
PDLIM1-203ENST00000490391 PSPHP1O15172 72 aa1.86□□□□□ -2.11
PDLIM1-203ENST00000490391 H3BPC8 53 aa1.85□□□□□ -2.11
PDLIM1-203ENST00000490391 V9GYY9 64 aa1.85□□□□□ -2.11
PDLIM1-203ENST00000490391 SPANXA2-OT1Q8N9U9 137 aa1.84□□□□□ -2.11
PDLIM1-203ENST00000490391 FAM240AA0A1B0GVK7 77 aa1.83□□□□□ -2.12
PDLIM1-203ENST00000490391 CHKB-CPT1BH3BT56 60 aa1.83□□□□□ -2.12
PDLIM1-203ENST00000490391 ATP5EP2Q5VTU8 51 aa1.82□□□□□ -2.12
PDLIM1-203ENST00000490391 KRTAP25-1Q3LHN0 102 aa1.81□□□□□ -2.12
PDLIM1-203ENST00000490391 PRO0628Q9UI54 55 aa1.79□□□□□ -2.12
PDLIM1-203ENST00000490391 PHGR1C9JFL3 82 aa1.77□□□□□ -2.13
PDLIM1-203ENST00000490391 ETDBQ3ZM63 59 aa1.75□□□□□ -2.13
PDLIM1-203ENST00000490391 A0A1B0GU33 70 aa1.74□□□□□ -2.13
PDLIM1-203ENST00000490391 ANAPC13Q9BS18 74 aa1.74□□□□□ -2.13
PDLIM1-203ENST00000490391 SCGB1A1P11684 91 aa1.73□□□□□ -2.13
PDLIM1-203ENST00000490391 K7ERS5 55 aa1.7□□□□□ -2.14
PDLIM1-203ENST00000490391 SERP1Q9Y6X1 66 aa1.68□□□□□ -2.14
PDLIM1-203ENST00000490391 A6NED7 52 aa1.66□□□□□ -2.14
PDLIM1-203ENST00000490391 F8W1H4 67 aa1.66□□□□□ -2.14
PDLIM1-203ENST00000490391 LINC00643Q86TS7 51 aa1.65□□□□□ -2.15
PDLIM1-203ENST00000490391 SMIM6P0DI80 62 aa1.58□□□□□ -2.16
PDLIM1-203ENST00000490391 GTF2H5Q6ZYL4 71 aa1.58□□□□□ -2.16
PDLIM1-203ENST00000490391 COA5Q86WW8 74 aa1.57□□□□□ -2.16
PDLIM1-203ENST00000490391 COL5A1-AS1Q5SY13 56 aa1.55□□□□□ -2.16
PDLIM1-203ENST00000490391 SNURFQ9Y675 71 aa1.53□□□□□ -2.16
PDLIM1-203ENST00000490391 SERP2Q8N6R1 65 aa1.52□□□□□ -2.17
PDLIM1-203ENST00000490391 H7BZZ5 65 aa1.47□□□□□ -2.17
PDLIM1-203ENST00000490391 A0A1B0GU69 56 aa1.46□□□□□ -2.18
PDLIM1-203ENST00000490391 SMIM20Q8N5G0 67 aa1.44□□□□□ -2.18
PDLIM1-203ENST00000490391 PRR15LQ9BU68 103 aa1.4□□□□□ -2.19
PDLIM1-203ENST00000490391 KRTAP21-1Q3LI58 79 aa1.35□□□□□ -2.19
PDLIM1-203ENST00000490391 TMEM258P61165 79 aa1.3□□□□□ -2.2
PDLIM1-203ENST00000490391 RPS28P62857 69 aaKnown RBP1.27□□□□□ -2.21
PDLIM1-203ENST00000490391 KTN1-AS1Q86SY8 53 aa1.26□□□□□ -2.21
PDLIM1-203ENST00000490391 LOC105371267A0A1B0GV96 52 aa1.25□□□□□ -2.21
PDLIM1-203ENST00000490391 PMAIP1Q13794 54 aa1.23□□□□□ -2.21
PDLIM1-203ENST00000490391 UQCR11O14957 56 aa1.22□□□□□ -2.21
PDLIM1-203ENST00000490391 J3QR89 54 aa1.2□□□□□ -2.22
PDLIM1-203ENST00000490391 LINC01558Q9Y6Z2 57 aa1.18□□□□□ -2.22
PDLIM1-203ENST00000490391 MIR22HGQ0VDD5 57 aa1.15□□□□□ -2.23
PDLIM1-203ENST00000490391 Q1T7F1 81 aa1.14□□□□□ -2.23
PDLIM1-203ENST00000490391 A0A1B0GV90 55 aa1.08□□□□□ -2.24
PDLIM1-203ENST00000490391 CDC42SE1Q9NRR8 79 aa1.08□□□□□ -2.24
PDLIM1-203ENST00000490391 COX7CP15954 63 aa1.06□□□□□ -2.24
PDLIM1-203ENST00000490391 MUC16Q8WXI7 14507 aa1.05□□□□□ -2.24
PDLIM1-203ENST00000490391 ROMO1P60602 79 aa1.05□□□□□ -2.24
PDLIM1-203ENST00000490391 K7ERU9 68 aa0.94□□□□□ -2.26
PDLIM1-203ENST00000490391 ATP5EP56381 51 aaPredicted RBP0.89□□□□□ -2.27
PDLIM1-203ENST00000490391 INE1O15225 51 aa0.86□□□□□ -2.27
PDLIM1-203ENST00000490391 CCDC179H3BU77 68 aa0.78□□□□□ -2.28
PDLIM1-203ENST00000490391 BRK1Q8WUW1 75 aa0.62□□□□□ -2.31
PDLIM1-203ENST00000490391 PRM1P04553 51 aa0.52□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 120.8 ms