RNA–Protein interactions for RNA: ENST00000490354.5

RBM39-235, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 436 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-235ENST00000490354 MIR22HGQ0VDD5 57 aa2.07□□□□□ -2.08
RBM39-235ENST00000490354 CRIPTQ9P021 101 aa2.06□□□□□ -2.08
RBM39-235ENST00000490354 M0QZ58 72 aa2.05□□□□□ -2.08
RBM39-235ENST00000490354 MT2AP02795 61 aa2.05□□□□□ -2.08
RBM39-235ENST00000490354 LINC01554Q52M75 96 aa2.05□□□□□ -2.08
RBM39-235ENST00000490354 MT1FP04733 61 aa2.03□□□□□ -2.08
RBM39-235ENST00000490354 KRTAP10-10P60014 251 aa2.03□□□□□ -2.08
RBM39-235ENST00000490354 KRTAP13-4Q3LI77 160 aa2.02□□□□□ -2.09
RBM39-235ENST00000490354 R4GN34 69 aa2.02□□□□□ -2.09
RBM39-235ENST00000490354 SPRR2GQ9BYE4 73 aa2.01□□□□□ -2.09
RBM39-235ENST00000490354 A0A0D9SG42 100 aa1.97□□□□□ -2.09
RBM39-235ENST00000490354 USH2AO75445 5202 aa1.97□□□□□ -2.09
RBM39-235ENST00000490354 KRTAP25-1Q3LHN0 102 aa1.96□□□□□ -2.1
RBM39-235ENST00000490354 KRTAP19-8Q3LI54 63 aa1.96□□□□□ -2.1
RBM39-235ENST00000490354 K7ERS5 55 aa1.94□□□□□ -2.1
RBM39-235ENST00000490354 KRTAP12-1P59990 96 aa1.94□□□□□ -2.1
RBM39-235ENST00000490354 KRTAP21-2Q3LI59 83 aa1.93□□□□□ -2.1
RBM39-235ENST00000490354 SPINT4Q6UDR6 99 aa1.93□□□□□ -2.1
RBM39-235ENST00000490354 PLAC4Q8WY50 150 aa1.93□□□□□ -2.1
RBM39-235ENST00000490354 ROMO1P60602 79 aa1.92□□□□□ -2.1
RBM39-235ENST00000490354 MT1BP07438 61 aa1.91□□□□□ -2.1
RBM39-235ENST00000490354 SSPOA2VEC9 5147 aa1.9□□□□□ -2.11
RBM39-235ENST00000490354 CAMK2N1Q7Z7J9 78 aa1.89□□□□□ -2.11
RBM39-235ENST00000490354 FSIP2Q5CZC0 6907 aa1.87□□□□□ -2.11
RBM39-235ENST00000490354 MT1XP80297 61 aa1.85□□□□□ -2.11
RBM39-235ENST00000490354 C10orf95Q9H7T3 257 aa1.85□□□□□ -2.11
RBM39-235ENST00000490354 PRO2289Q9P1D8 64 aa1.85□□□□□ -2.11
RBM39-235ENST00000490354 KRTAP19-6Q3LI70 58 aa1.84□□□□□ -2.11
RBM39-235ENST00000490354 FCGBPQ9Y6R7 5405 aaPredicted RBP1.8□□□□□ -2.12
RBM39-235ENST00000490354 SPRR5A0A1B0GTR4 108 aa1.8□□□□□ -2.12
RBM39-235ENST00000490354 TNP1P09430 55 aa1.8□□□□□ -2.12
RBM39-235ENST00000490354 CRCT1Q9UGL9 99 aa1.78□□□□□ -2.12
RBM39-235ENST00000490354 KMT2DO14686 5537 aa1.76□□□□□ -2.13
RBM39-235ENST00000490354 KRTAP8-1Q8IUC2 63 aa1.71□□□□□ -2.14
RBM39-235ENST00000490354 MACF1Q9UPN3 7388 aaKnown RBP1.71□□□□□ -2.14
RBM39-235ENST00000490354 SYNE2Q8WXH0 6885 aaKnown RBP1.67□□□□□ -2.14
RBM39-235ENST00000490354 KRTAP12-3P60328 96 aa1.66□□□□□ -2.14
RBM39-235ENST00000490354 KRTAP19-5Q3LI72 72 aa1.66□□□□□ -2.14
RBM39-235ENST00000490354 KRTAP19-7Q3SYF9 63 aa1.66□□□□□ -2.14
RBM39-235ENST00000490354 MUC12Q9UKN1 5478 aa1.64□□□□□ -2.15
RBM39-235ENST00000490354 MDN1Q9NU22 5596 aa1.63□□□□□ -2.15
RBM39-235ENST00000490354 MT1EP04732 61 aa1.63□□□□□ -2.15
RBM39-235ENST00000490354 KRTAP6-3Q3LI67 103 aa1.62□□□□□ -2.15
RBM39-235ENST00000490354 LUZP6Q538Z0 58 aa1.62□□□□□ -2.15
RBM39-235ENST00000490354 SPRR2FQ96RM1 72 aa1.61□□□□□ -2.15
RBM39-235ENST00000490354 MT1LQ93083 61 aa1.59□□□□□ -2.15
RBM39-235ENST00000490354 KRTAP12-4P60329 112 aa1.58□□□□□ -2.16
RBM39-235ENST00000490354 KRTAP19-3Q7Z4W3 81 aa1.58□□□□□ -2.16
RBM39-235ENST00000490354 MT1GP13640 62 aa1.57□□□□□ -2.16
RBM39-235ENST00000490354 NEBP20929 6669 aa1.56□□□□□ -2.16
RBM39-235ENST00000490354 SPRR2EP22531 72 aa1.53□□□□□ -2.16
RBM39-235ENST00000490354 SPRR2BP35325 72 aa1.53□□□□□ -2.16
RBM39-235ENST00000490354 SPRR2AP35326 72 aa1.53□□□□□ -2.16
RBM39-235ENST00000490354 MT1MQ8N339 61 aa1.53□□□□□ -2.16
RBM39-235ENST00000490354 HMCN1Q96RW7 5635 aa1.52□□□□□ -2.17
RBM39-235ENST00000490354 INE1O15225 51 aa1.49□□□□□ -2.17
RBM39-235ENST00000490354 SPRR2DP22532 72 aa1.48□□□□□ -2.17
RBM39-235ENST00000490354 DSTQ03001 7570 aaKnown RBP1.45□□□□□ -2.18
RBM39-235ENST00000490354 KRTAP2-3P0C7H8 128 aa1.42□□□□□ -2.18
RBM39-235ENST00000490354 KRTAP2-4Q9BYR9 128 aa1.42□□□□□ -2.18
RBM39-235ENST00000490354 KRTAP20-1Q3LI63 56 aa1.39□□□□□ -2.19
RBM39-235ENST00000490354 KRTAP2-1Q9BYU5 128 aa1.39□□□□□ -2.19
RBM39-235ENST00000490354 SYNE1Q8NF91 8797 aaKnown RBP1.39□□□□□ -2.19
RBM39-235ENST00000490354 MT1AP04731 61 aa1.36□□□□□ -2.19
RBM39-235ENST00000490354 KRTAP6-1Q3LI64 71 aa1.33□□□□□ -2.2
RBM39-235ENST00000490354 MT4P47944 62 aa1.28□□□□□ -2.2
RBM39-235ENST00000490354 KRTAP20-2Q3LI61 65 aa1.25□□□□□ -2.21
RBM39-235ENST00000490354 KRTAP6-2Q3LI66 62 aa1.24□□□□□ -2.21
RBM39-235ENST00000490354 GPR98Q8WXG9 6306 aa1.15□□□□□ -2.22
RBM39-235ENST00000490354 AHNAK2Q8IVF2 5795 aa1.14□□□□□ -2.23
RBM39-235ENST00000490354 KRTAP5-10Q6L8G5 202 aa1.09□□□□□ -2.23
RBM39-235ENST00000490354 MUC5ACP98088 5654 aa1.09□□□□□ -2.23
RBM39-235ENST00000490354 PRM1P04553 51 aa0.99□□□□□ -2.25
RBM39-235ENST00000490354 MUC5BQ9HC84 5762 aaPredicted RBP0.96□□□□□ -2.26
RBM39-235ENST00000490354 MUC16Q8WXI7 14507 aa0.95□□□□□ -2.26
RBM39-235ENST00000490354 AHNAKQ09666 5890 aaKnown RBP0.92□□□□□ -2.26
RBM39-235ENST00000490354 PHGR1C9JFL3 82 aa0.77□□□□□ -2.29
RBM39-235ENST00000490354 KRTAP21-1Q3LI58 79 aa0.68□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 70.2 ms