RNA–Protein interactions for RNA: ENST00000488459.1

HUWE1-212, Transcript of HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene HUWE1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HUWE1-212ENST00000488459 NDUFAF8A1L188 74 aa3.96□□□□□ -1.78
HUWE1-212ENST00000488459 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.95□□□□□ -1.78
HUWE1-212ENST00000488459 MACF1Q9UPN3 7388 aaKnown RBP3.94□□□□□ -1.78
HUWE1-212ENST00000488459 KRTAP4-7Q9BYR0 210 aa3.93□□□□□ -1.78
HUWE1-212ENST00000488459 KRTAP19-4Q3LI73 84 aa3.92□□□□□ -1.78
HUWE1-212ENST00000488459 KRTAP19-3Q7Z4W3 81 aa3.9□□□□□ -1.79
HUWE1-212ENST00000488459 MT1GP13640 62 aa3.87□□□□□ -1.79
HUWE1-212ENST00000488459 SYNE2Q8WXH0 6885 aaKnown RBP3.84□□□□□ -1.79
HUWE1-212ENST00000488459 MT1MQ8N339 61 aa3.84□□□□□ -1.79
HUWE1-212ENST00000488459 KRTAP5-9P26371 169 aa3.83□□□□□ -1.8
HUWE1-212ENST00000488459 KRTAP4-3Q9BYR4 195 aa3.82□□□□□ -1.8
HUWE1-212ENST00000488459 KRTAP6-3Q3LI67 103 aa3.81□□□□□ -1.8
HUWE1-212ENST00000488459 SPRR2EP22531 72 aa3.8□□□□□ -1.8
HUWE1-212ENST00000488459 SPRR2BP35325 72 aa3.8□□□□□ -1.8
HUWE1-212ENST00000488459 SPRR2AP35326 72 aa3.8□□□□□ -1.8
HUWE1-212ENST00000488459 LCE5AQ5TCM9 118 aa3.79□□□□□ -1.8
HUWE1-212ENST00000488459 LCE1AQ5T7P2 110 aa3.78□□□□□ -1.8
HUWE1-212ENST00000488459 MUC12Q9UKN1 5478 aa3.77□□□□□ -1.81
HUWE1-212ENST00000488459 KRTAP9-6A8MVA2 160 aa3.76□□□□□ -1.81
HUWE1-212ENST00000488459 LOC100996750A0A140TA64 210 aa3.69□□□□□ -1.82
HUWE1-212ENST00000488459 SPRR2DP22532 72 aa3.66□□□□□ -1.82
HUWE1-212ENST00000488459 MDN1Q9NU22 5596 aa3.57□□□□□ -1.84
HUWE1-212ENST00000488459 NEBP20929 6669 aa3.55□□□□□ -1.84
HUWE1-212ENST00000488459 KRTAP20-1Q3LI63 56 aa3.5□□□□□ -1.85
HUWE1-212ENST00000488459 LCE3BQ5TA77 95 aa3.49□□□□□ -1.85
HUWE1-212ENST00000488459 KRTAP2-3P0C7H8 128 aa3.48□□□□□ -1.85
HUWE1-212ENST00000488459 KRTAP2-4Q9BYR9 128 aa3.48□□□□□ -1.85
HUWE1-212ENST00000488459 KRTAP2-1Q9BYU5 128 aa3.48□□□□□ -1.85
HUWE1-212ENST00000488459 DSTQ03001 7570 aaKnown RBP3.42□□□□□ -1.86
HUWE1-212ENST00000488459 MT1AP04731 61 aa3.4□□□□□ -1.87
HUWE1-212ENST00000488459 KRTAP5-5Q701N2 237 aaPredicted RBP3.39□□□□□ -1.87
HUWE1-212ENST00000488459 KRTAP6-1Q3LI64 71 aa3.38□□□□□ -1.87
HUWE1-212ENST00000488459 GPR98Q8WXG9 6306 aa3.33□□□□□ -1.88
HUWE1-212ENST00000488459 KRTAP2-2Q9BYT5 123 aa3.27□□□□□ -1.89
HUWE1-212ENST00000488459 KRTAP9-4Q9BYQ2 154 aa3.24□□□□□ -1.89
HUWE1-212ENST00000488459 KRTAP12-4P60329 112 aa3.23□□□□□ -1.89
HUWE1-212ENST00000488459 INE1O15225 51 aa3.21□□□□□ -1.9
HUWE1-212ENST00000488459 KRTAP5-4Q6L8H1 288 aa3.21□□□□□ -1.9
HUWE1-212ENST00000488459 KRTAP4-6Q9BYQ5 205 aa3.21□□□□□ -1.9
HUWE1-212ENST00000488459 MT4P47944 62 aa3.2□□□□□ -1.9
HUWE1-212ENST00000488459 LCE4AQ5TA78 99 aa3.2□□□□□ -1.9
HUWE1-212ENST00000488459 KRTAP4-9Q9BYQ8 210 aa3.17□□□□□ -1.9
HUWE1-212ENST00000488459 SYNE1Q8NF91 8797 aaKnown RBP3.17□□□□□ -1.9
HUWE1-212ENST00000488459 KRTAP4-12Q9BQ66 201 aa3.14□□□□□ -1.91
HUWE1-212ENST00000488459 KRTAP6-2Q3LI66 62 aa3.13□□□□□ -1.91
HUWE1-212ENST00000488459 MT3P25713 68 aa3.1□□□□□ -1.91
HUWE1-212ENST00000488459 LCE1DQ5T752 114 aa3.07□□□□□ -1.92
HUWE1-212ENST00000488459 KRTAP20-2Q3LI61 65 aa3.05□□□□□ -1.92
HUWE1-212ENST00000488459 LCE3DQ9BYE3 92 aa3.02□□□□□ -1.93
HUWE1-212ENST00000488459 KRTAP9-9Q9BYP9 154 aa3.01□□□□□ -1.93
HUWE1-212ENST00000488459 LCE3EQ5T5B0 92 aa2.95□□□□□ -1.94
HUWE1-212ENST00000488459 HMCN1Q96RW7 5635 aa2.93□□□□□ -1.94
HUWE1-212ENST00000488459 KRTAP5-2Q701N4 177 aa2.91□□□□□ -1.94
HUWE1-212ENST00000488459 KRTAP5-3Q6L8H2 238 aa2.9□□□□□ -1.95
HUWE1-212ENST00000488459 AHNAK2Q8IVF2 5795 aa2.83□□□□□ -1.96
HUWE1-212ENST00000488459 KRTAP5-10Q6L8G5 202 aa2.81□□□□□ -1.96
HUWE1-212ENST00000488459 KRTAP5-7Q6L8G8 165 aa2.79□□□□□ -1.96
HUWE1-212ENST00000488459 OBSCNQ5VST9 7968 aa2.75□□□□□ -1.97
HUWE1-212ENST00000488459 KRTAP4-11Q9BYQ6 195 aa2.65□□□□□ -1.99
HUWE1-212ENST00000488459 LCE1EQ5T753 118 aa2.62□□□□□ -1.99
HUWE1-212ENST00000488459 PRM1P04553 51 aa2.61□□□□□ -1.99
HUWE1-212ENST00000488459 LCE1BQ5T7P3 118 aa2.59□□□□□ -1.99
HUWE1-212ENST00000488459 KRTAP4-2Q9BYR5 136 aa2.53□□□□□ -2
HUWE1-212ENST00000488459 KRTAP5-1Q6L8H4 278 aa2.52□□□□□ -2.01
HUWE1-212ENST00000488459 KRTAP5-8O75690 187 aa2.51□□□□□ -2.01
HUWE1-212ENST00000488459 AHNAKQ09666 5890 aaKnown RBP2.51□□□□□ -2.01
HUWE1-212ENST00000488459 LCE1FQ5T754 118 aa2.49□□□□□ -2.01
HUWE1-212ENST00000488459 MUC5BQ9HC84 5762 aaPredicted RBP2.45□□□□□ -2.02
HUWE1-212ENST00000488459 LCE1CQ5T751 118 aa2.44□□□□□ -2.02
HUWE1-212ENST00000488459 MUC5ACP98088 5654 aa2.42□□□□□ -2.02
HUWE1-212ENST00000488459 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.25□□□□□ -2.05
HUWE1-212ENST00000488459 KRTAP21-2Q3LI59 83 aa2.18□□□□□ -2.06
HUWE1-212ENST00000488459 KRTAP5-11Q6L8G4 156 aa2.13□□□□□ -2.07
HUWE1-212ENST00000488459 KRTAP4-4Q9BYR3 166 aa2.03□□□□□ -2.08
HUWE1-212ENST00000488459 PHGR1C9JFL3 82 aa1.85□□□□□ -2.11
HUWE1-212ENST00000488459 MUC19Q7Z5P9 8384 aa1.58□□□□□ -2.16
HUWE1-212ENST00000488459 KRTAP21-1Q3LI58 79 aa1.56□□□□□ -2.16
HUWE1-212ENST00000488459 MUC16Q8WXI7 14507 aa1.23□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 71.6 ms