RNA–Protein interactions for RNA: ENST00000487332.1

RNF220-215, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-215ENST00000487332 MT1LQ93083 61 aa3.67□□□□□ -1.82
RNF220-215ENST00000487332 MIR22HGQ0VDD5 57 aa3.65□□□□□ -1.83
RNF220-215ENST00000487332 Q1T7F1 81 aa3.64□□□□□ -1.83
RNF220-215ENST00000487332 MT1MQ8N339 61 aa3.64□□□□□ -1.83
RNF220-215ENST00000487332 A0A0A0MQY5 61 aa3.6□□□□□ -1.83
RNF220-215ENST00000487332 K7ERS5 55 aa3.6□□□□□ -1.83
RNF220-215ENST00000487332 KRTAP25-1Q3LHN0 102 aa3.59□□□□□ -1.83
RNF220-215ENST00000487332 KRTAP12-3P60328 96 aa3.57□□□□□ -1.84
RNF220-215ENST00000487332 PSPHP1O15172 72 aa3.56□□□□□ -1.84
RNF220-215ENST00000487332 LCE4AQ5TA78 99 aa3.54□□□□□ -1.84
RNF220-215ENST00000487332 DSTQ03001 7570 aaKnown RBP3.53□□□□□ -1.84
RNF220-215ENST00000487332 KRTAP23-1A1A580 65 aa3.52□□□□□ -1.85
RNF220-215ENST00000487332 RPS28P62857 69 aaKnown RBP3.49□□□□□ -1.85
RNF220-215ENST00000487332 KRTAP19-4Q3LI73 84 aa3.49□□□□□ -1.85
RNF220-215ENST00000487332 KRTAP5-4Q6L8H1 288 aa3.49□□□□□ -1.85
RNF220-215ENST00000487332 KRTAP4-9Q9BYQ8 210 aa3.49□□□□□ -1.85
RNF220-215ENST00000487332 LCE1DQ5T752 114 aa3.48□□□□□ -1.85
RNF220-215ENST00000487332 KRTAP4-3Q9BYR4 195 aa3.47□□□□□ -1.85
RNF220-215ENST00000487332 A6NED7 52 aa3.46□□□□□ -1.86
RNF220-215ENST00000487332 LOC100996750A0A140TA64 210 aa3.43□□□□□ -1.86
RNF220-215ENST00000487332 KRTAP4-6Q9BYQ5 205 aa3.43□□□□□ -1.86
RNF220-215ENST00000487332 KRTAP4-7Q9BYR0 210 aa3.42□□□□□ -1.86
RNF220-215ENST00000487332 CDC42SE1Q9NRR8 79 aa3.41□□□□□ -1.86
RNF220-215ENST00000487332 MT4P47944 62 aa3.39□□□□□ -1.87
RNF220-215ENST00000487332 KRTAP5-5Q701N2 237 aaPredicted RBP3.38□□□□□ -1.87
RNF220-215ENST00000487332 HMCN1Q96RW7 5635 aa3.37□□□□□ -1.87
RNF220-215ENST00000487332 KRTAP15-1Q3LI76 137 aa3.36□□□□□ -1.87
RNF220-215ENST00000487332 ROMO1P60602 79 aa3.35□□□□□ -1.87
RNF220-215ENST00000487332 SPRR5A0A1B0GTR4 108 aa3.29□□□□□ -1.88
RNF220-215ENST00000487332 LCE3CQ5T5A8 94 aa3.29□□□□□ -1.88
RNF220-215ENST00000487332 GPR98Q8WXG9 6306 aa3.28□□□□□ -1.88
RNF220-215ENST00000487332 KRTAP20-2Q3LI61 65 aa3.26□□□□□ -1.89
RNF220-215ENST00000487332 KRTAP12-4P60329 112 aa3.24□□□□□ -1.89
RNF220-215ENST00000487332 KRTAP5-10Q6L8G5 202 aa3.23□□□□□ -1.89
RNF220-215ENST00000487332 AHNAK2Q8IVF2 5795 aa3.2□□□□□ -1.9
RNF220-215ENST00000487332 KRTAP5-3Q6L8H2 238 aa3.17□□□□□ -1.9
RNF220-215ENST00000487332 MT1AP04731 61 aa3.14□□□□□ -1.91
RNF220-215ENST00000487332 KRTAP5-7Q6L8G8 165 aa3.12□□□□□ -1.91
RNF220-215ENST00000487332 SYNE1Q8NF91 8797 aaKnown RBP3.11□□□□□ -1.91
RNF220-215ENST00000487332 KRTAP9-6A8MVA2 160 aa3.08□□□□□ -1.92
RNF220-215ENST00000487332 KRTAP6-1Q3LI64 71 aa3.08□□□□□ -1.92
RNF220-215ENST00000487332 KRTAP5-2Q701N4 177 aa3.07□□□□□ -1.92
RNF220-215ENST00000487332 KRTAP9-4Q9BYQ2 154 aa3.01□□□□□ -1.93
RNF220-215ENST00000487332 BRK1Q8WUW1 75 aa3□□□□□ -1.93
RNF220-215ENST00000487332 PRAC1Q96KF2 57 aa2.97□□□□□ -1.93
RNF220-215ENST00000487332 KRTAP4-12Q9BQ66 201 aa2.97□□□□□ -1.93
RNF220-215ENST00000487332 KRTAP4-11Q9BYQ6 195 aa2.95□□□□□ -1.94
RNF220-215ENST00000487332 KRTAP9-9Q9BYP9 154 aa2.94□□□□□ -1.94
RNF220-215ENST00000487332 KRTAP6-2Q3LI66 62 aa2.92□□□□□ -1.94
RNF220-215ENST00000487332 KRTAP5-8O75690 187 aa2.86□□□□□ -1.95
RNF220-215ENST00000487332 MT3P25713 68 aa2.86□□□□□ -1.95
RNF220-215ENST00000487332 PMAIP1Q13794 54 aa2.82□□□□□ -1.96
RNF220-215ENST00000487332 PRO0628Q9UI54 55 aa2.75□□□□□ -1.97
RNF220-215ENST00000487332 KRTAP5-1Q6L8H4 278 aa2.73□□□□□ -1.97
RNF220-215ENST00000487332 KRTAP4-2Q9BYR5 136 aa2.68□□□□□ -1.98
RNF220-215ENST00000487332 LCE1EQ5T753 118 aa2.66□□□□□ -1.98
RNF220-215ENST00000487332 MUC5ACP98088 5654 aa2.64□□□□□ -1.99
RNF220-215ENST00000487332 OBSCNQ5VST9 7968 aa2.63□□□□□ -1.99
RNF220-215ENST00000487332 NDUFAF8A1L188 74 aa2.62□□□□□ -1.99
RNF220-215ENST00000487332 MUC5BQ9HC84 5762 aaPredicted RBP2.61□□□□□ -1.99
RNF220-215ENST00000487332 AHNAKQ09666 5890 aaKnown RBP2.57□□□□□ -2
RNF220-215ENST00000487332 KTN1-AS1Q86SY8 53 aa2.56□□□□□ -2
RNF220-215ENST00000487332 LUZP6Q538Z0 58 aa2.52□□□□□ -2.01
RNF220-215ENST00000487332 LCE1CQ5T751 118 aa2.46□□□□□ -2.02
RNF220-215ENST00000487332 LCE1BQ5T7P3 118 aa2.46□□□□□ -2.02
RNF220-215ENST00000487332 LCE3DQ9BYE3 92 aa2.38□□□□□ -2.03
RNF220-215ENST00000487332 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.27□□□□□ -2.05
RNF220-215ENST00000487332 LCE3EQ5T5B0 92 aa2.25□□□□□ -2.05
RNF220-215ENST00000487332 KRTAP5-11Q6L8G4 156 aa2.24□□□□□ -2.05
RNF220-215ENST00000487332 LCE1FQ5T754 118 aa2.18□□□□□ -2.06
RNF220-215ENST00000487332 KRTAP21-2Q3LI59 83 aa2.04□□□□□ -2.08
RNF220-215ENST00000487332 PHGR1C9JFL3 82 aa1.91□□□□□ -2.1
RNF220-215ENST00000487332 INE1O15225 51 aa1.8□□□□□ -2.12
RNF220-215ENST00000487332 KRTAP4-4Q9BYR3 166 aa1.78□□□□□ -2.12
RNF220-215ENST00000487332 PRM1P04553 51 aa1.69□□□□□ -2.14
RNF220-215ENST00000487332 MUC19Q7Z5P9 8384 aa1.61□□□□□ -2.15
RNF220-215ENST00000487332 KRTAP21-1Q3LI58 79 aa1.45□□□□□ -2.18
RNF220-215ENST00000487332 MUC16Q8WXI7 14507 aa1.24□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 88.7 ms