RNA–Protein interactions for RNA: ENST00000487305.5

TMEM39B-208, Transcript of transmembrane protein 39B, humanhuman

TSL 2

Gene TMEM39B, Length 2,087 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-208ENST00000487305 KRTAP19-5Q3LI72 72 aa4.58□□□□□ -1.68
TMEM39B-208ENST00000487305 KRTAP4-9Q9BYQ8 210 aa4.55□□□□□ -1.68
TMEM39B-208ENST00000487305 KRTAP4-2Q9BYR5 136 aa4.45□□□□□ -1.7
TMEM39B-208ENST00000487305 KRTAP19-7Q3SYF9 63 aa4.37□□□□□ -1.71
TMEM39B-208ENST00000487305 KRTAP4-11Q9BYQ6 195 aa4.36□□□□□ -1.71
TMEM39B-208ENST00000487305 KRTAP9-7A8MTY7 169 aa4.35□□□□□ -1.71
TMEM39B-208ENST00000487305 KRTAP2-3P0C7H8 128 aa4.33□□□□□ -1.72
TMEM39B-208ENST00000487305 KRTAP2-4Q9BYR9 128 aa4.33□□□□□ -1.72
TMEM39B-208ENST00000487305 KRTAP2-1Q9BYU5 128 aa4.33□□□□□ -1.72
TMEM39B-208ENST00000487305 LCE4AQ5TA78 99 aa4.33□□□□□ -1.72
TMEM39B-208ENST00000487305 KRTAP9-6A8MVA2 160 aa4.3□□□□□ -1.72
TMEM39B-208ENST00000487305 MT1LQ93083 61 aa4.28□□□□□ -1.72
TMEM39B-208ENST00000487305 MT1EP04732 61 aa4.27□□□□□ -1.73
TMEM39B-208ENST00000487305 USH2AO75445 5202 aa4.25□□□□□ -1.73
TMEM39B-208ENST00000487305 LCE5AQ5TCM9 118 aa4.22□□□□□ -1.73
TMEM39B-208ENST00000487305 KRTAP19-6Q3LI70 58 aa4.2□□□□□ -1.74
TMEM39B-208ENST00000487305 KMT2DO14686 5537 aa4.16□□□□□ -1.74
TMEM39B-208ENST00000487305 SSPOA2VEC9 5147 aa4.14□□□□□ -1.75
TMEM39B-208ENST00000487305 KRTAP5-3Q6L8H2 238 aa4.07□□□□□ -1.76
TMEM39B-208ENST00000487305 MT1GP13640 62 aa4.06□□□□□ -1.76
TMEM39B-208ENST00000487305 KRTAP19-3Q7Z4W3 81 aa4.01□□□□□ -1.77
TMEM39B-208ENST00000487305 MT1MQ8N339 61 aa3.98□□□□□ -1.77
TMEM39B-208ENST00000487305 KRTAP6-3Q3LI67 103 aa3.97□□□□□ -1.77
TMEM39B-208ENST00000487305 FSIP2Q5CZC0 6907 aa3.94□□□□□ -1.78
TMEM39B-208ENST00000487305 KRTAP20-1Q3LI63 56 aa3.86□□□□□ -1.79
TMEM39B-208ENST00000487305 KRTAP4-3Q9BYR4 195 aa3.86□□□□□ -1.79
TMEM39B-208ENST00000487305 KRTAP12-4P60329 112 aa3.78□□□□□ -1.8
TMEM39B-208ENST00000487305 FCGBPQ9Y6R7 5405 aaPredicted RBP3.77□□□□□ -1.81
TMEM39B-208ENST00000487305 MT1AP04731 61 aa3.76□□□□□ -1.81
TMEM39B-208ENST00000487305 SPRR2FQ96RM1 72 aa3.75□□□□□ -1.81
TMEM39B-208ENST00000487305 MUC12Q9UKN1 5478 aa3.71□□□□□ -1.81
TMEM39B-208ENST00000487305 NEBP20929 6669 aa3.67□□□□□ -1.82
TMEM39B-208ENST00000487305 MACF1Q9UPN3 7388 aaKnown RBP3.63□□□□□ -1.83
TMEM39B-208ENST00000487305 SYNE2Q8WXH0 6885 aaKnown RBP3.59□□□□□ -1.83
TMEM39B-208ENST00000487305 KRTAP6-1Q3LI64 71 aa3.57□□□□□ -1.84
TMEM39B-208ENST00000487305 KRTAP5-9P26371 169 aa3.56□□□□□ -1.84
TMEM39B-208ENST00000487305 LCE3DQ9BYE3 92 aa3.56□□□□□ -1.84
TMEM39B-208ENST00000487305 LCE3EQ5T5B0 92 aa3.54□□□□□ -1.84
TMEM39B-208ENST00000487305 KRTAP5-5Q701N2 237 aaPredicted RBP3.54□□□□□ -1.84
TMEM39B-208ENST00000487305 KRTAP2-2Q9BYT5 123 aa3.53□□□□□ -1.84
TMEM39B-208ENST00000487305 LCE1AQ5T7P2 110 aa3.52□□□□□ -1.85
TMEM39B-208ENST00000487305 DSTQ03001 7570 aaKnown RBP3.46□□□□□ -1.86
TMEM39B-208ENST00000487305 SPRR2EP22531 72 aa3.41□□□□□ -1.86
TMEM39B-208ENST00000487305 SPRR2BP35325 72 aa3.41□□□□□ -1.86
TMEM39B-208ENST00000487305 SPRR2AP35326 72 aa3.41□□□□□ -1.86
TMEM39B-208ENST00000487305 SYNE1Q8NF91 8797 aaKnown RBP3.37□□□□□ -1.87
TMEM39B-208ENST00000487305 MDN1Q9NU22 5596 aa3.34□□□□□ -1.87
TMEM39B-208ENST00000487305 PRM1P04553 51 aa3.31□□□□□ -1.88
TMEM39B-208ENST00000487305 SPRR2DP22532 72 aa3.31□□□□□ -1.88
TMEM39B-208ENST00000487305 MT3P25713 68 aa3.31□□□□□ -1.88
TMEM39B-208ENST00000487305 GPR98Q8WXG9 6306 aa3.27□□□□□ -1.89
TMEM39B-208ENST00000487305 KRTAP6-2Q3LI66 62 aa3.21□□□□□ -1.89
TMEM39B-208ENST00000487305 KRTAP5-4Q6L8H1 288 aa3.12□□□□□ -1.91
TMEM39B-208ENST00000487305 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.03□□□□□ -1.92
TMEM39B-208ENST00000487305 KRTAP5-7Q6L8G8 165 aa2.99□□□□□ -1.93
TMEM39B-208ENST00000487305 KRTAP5-10Q6L8G5 202 aa2.96□□□□□ -1.94
TMEM39B-208ENST00000487305 KRTAP5-2Q701N4 177 aa2.93□□□□□ -1.94
TMEM39B-208ENST00000487305 OBSCNQ5VST9 7968 aa2.91□□□□□ -1.94
TMEM39B-208ENST00000487305 KRTAP5-11Q6L8G4 156 aa2.89□□□□□ -1.95
TMEM39B-208ENST00000487305 KRTAP20-2Q3LI61 65 aa2.87□□□□□ -1.95
TMEM39B-208ENST00000487305 AHNAK2Q8IVF2 5795 aa2.86□□□□□ -1.95
TMEM39B-208ENST00000487305 HMCN1Q96RW7 5635 aa2.82□□□□□ -1.96
TMEM39B-208ENST00000487305 MT4P47944 62 aa2.81□□□□□ -1.96
TMEM39B-208ENST00000487305 LCE1EQ5T753 118 aa2.79□□□□□ -1.96
TMEM39B-208ENST00000487305 MUC5ACP98088 5654 aa2.66□□□□□ -1.98
TMEM39B-208ENST00000487305 AHNAKQ09666 5890 aaKnown RBP2.65□□□□□ -1.99
TMEM39B-208ENST00000487305 KRTAP5-1Q6L8H4 278 aa2.59□□□□□ -2
TMEM39B-208ENST00000487305 LCE1CQ5T751 118 aa2.56□□□□□ -2
TMEM39B-208ENST00000487305 LCE1BQ5T7P3 118 aa2.56□□□□□ -2
TMEM39B-208ENST00000487305 MUC5BQ9HC84 5762 aaPredicted RBP2.55□□□□□ -2
TMEM39B-208ENST00000487305 KRTAP4-4Q9BYR3 166 aa2.49□□□□□ -2.01
TMEM39B-208ENST00000487305 LCE1FQ5T754 118 aa2.48□□□□□ -2.01
TMEM39B-208ENST00000487305 KRTAP5-8O75690 187 aa2.38□□□□□ -2.03
TMEM39B-208ENST00000487305 KRTAP21-2Q3LI59 83 aa2.33□□□□□ -2.04
TMEM39B-208ENST00000487305 KRTAP21-1Q3LI58 79 aa2.17□□□□□ -2.06
TMEM39B-208ENST00000487305 MUC19Q7Z5P9 8384 aa1.88□□□□□ -2.11
TMEM39B-208ENST00000487305 PHGR1C9JFL3 82 aa1.87□□□□□ -2.11
TMEM39B-208ENST00000487305 MUC16Q8WXI7 14507 aa1.28□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 12.3 ms