RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 PKHD1L1Q86WI1 4243 aa0.75□□□□□ -2.29
SNRNP27-204ENST00000487029 LRP1Q07954 4544 aaKnown RBP0.74□□□□□ -2.29
SNRNP27-204ENST00000487029 KRTAP8-1Q8IUC2 63 aa0.74□□□□□ -2.29
SNRNP27-204ENST00000487029 TNXBP22105 4242 aa0.73□□□□□ -2.29
SNRNP27-204ENST00000487029 SMR3BP02814 79 aaPredicted RBP0.73□□□□□ -2.29
SNRNP27-204ENST00000487029 FAT1Q14517 4588 aa0.72□□□□□ -2.29
SNRNP27-204ENST00000487029 STARD9Q9P2P6 4700 aa0.71□□□□□ -2.3
SNRNP27-204ENST00000487029 GPR98Q8WXG9 6306 aa0.71□□□□□ -2.3
SNRNP27-204ENST00000487029 LRP1BQ9NZR2 4599 aa0.71□□□□□ -2.3
SNRNP27-204ENST00000487029 LPAP08519 4548 aa0.7□□□□□ -2.3
SNRNP27-204ENST00000487029 HERC1Q15751 4861 aa0.7□□□□□ -2.3
SNRNP27-204ENST00000487029 KRTAP2-3P0C7H8 128 aa0.68□□□□□ -2.3
SNRNP27-204ENST00000487029 KRTAP2-4Q9BYR9 128 aa0.68□□□□□ -2.3
SNRNP27-204ENST00000487029 KRTAP2-1Q9BYU5 128 aa0.68□□□□□ -2.3
SNRNP27-204ENST00000487029 SPRR2GQ9BYE4 73 aa0.67□□□□□ -2.3
SNRNP27-204ENST00000487029 DNHD1Q96M86 4753 aa0.65□□□□□ -2.31
SNRNP27-204ENST00000487029 MUC17Q685J3 4493 aa0.64□□□□□ -2.31
SNRNP27-204ENST00000487029 AHNAKQ09666 5890 aaKnown RBP0.63□□□□□ -2.31
SNRNP27-204ENST00000487029 KRTAP19-3Q7Z4W3 81 aa0.62□□□□□ -2.31
SNRNP27-204ENST00000487029 RYR3Q15413 4870 aa0.62□□□□□ -2.31
SNRNP27-204ENST00000487029 KRTAP19-8Q3LI54 63 aa0.61□□□□□ -2.31
SNRNP27-204ENST00000487029 HYDINQ4G0P3 5121 aa0.6□□□□□ -2.31
SNRNP27-204ENST00000487029 MT1AP04731 61 aa0.6□□□□□ -2.31
SNRNP27-204ENST00000487029 MT1HL1P0DM35 61 aa0.6□□□□□ -2.31
SNRNP27-204ENST00000487029 KRTAP19-5Q3LI72 72 aa0.6□□□□□ -2.31
SNRNP27-204ENST00000487029 LRP2P98164 4655 aa0.6□□□□□ -2.31
SNRNP27-204ENST00000487029 PRM1P04553 51 aa0.59□□□□□ -2.31
SNRNP27-204ENST00000487029 MT1EP04732 61 aa0.59□□□□□ -2.31
SNRNP27-204ENST00000487029 KMT2CQ8NEZ4 4911 aaKnown RBP0.59□□□□□ -2.32
SNRNP27-204ENST00000487029 MT1LQ93083 61 aa0.58□□□□□ -2.32
SNRNP27-204ENST00000487029 RYR2Q92736 4967 aa0.57□□□□□ -2.32
SNRNP27-204ENST00000487029 MUC5BQ9HC84 5762 aaPredicted RBP0.57□□□□□ -2.32
SNRNP27-204ENST00000487029 RYR1P21817 5038 aa0.57□□□□□ -2.32
SNRNP27-204ENST00000487029 MT1XP80297 61 aa0.57□□□□□ -2.32
SNRNP27-204ENST00000487029 HERC2O95714 4834 aa0.56□□□□□ -2.32
SNRNP27-204ENST00000487029 SPRR2BP35325 72 aa0.55□□□□□ -2.32
SNRNP27-204ENST00000487029 SPRR2AP35326 72 aa0.55□□□□□ -2.32
SNRNP27-204ENST00000487029 KRTAP19-2Q3LHN2 52 aa0.55□□□□□ -2.32
SNRNP27-204ENST00000487029 BIRC6Q9NR09 4857 aa0.55□□□□□ -2.32
SNRNP27-204ENST00000487029 HMCN2Q8NDA2 5059 aa0.54□□□□□ -2.32
SNRNP27-204ENST00000487029 MT1HP80294 61 aa0.54□□□□□ -2.32
SNRNP27-204ENST00000487029 SPRR2FQ96RM1 72 aa0.54□□□□□ -2.32
SNRNP27-204ENST00000487029 MT2AP02795 61 aa0.53□□□□□ -2.32
SNRNP27-204ENST00000487029 MT1BP07438 61 aa0.53□□□□□ -2.32
SNRNP27-204ENST00000487029 SPRR2DP22532 72 aa0.53□□□□□ -2.32
SNRNP27-204ENST00000487029 PCLOQ9Y6V0 5065 aa0.53□□□□□ -2.32
SNRNP27-204ENST00000487029 MUC2Q02817 5179 aa0.52□□□□□ -2.33
SNRNP27-204ENST00000487029 MACF1Q9UPN3 7388 aaKnown RBP0.51□□□□□ -2.33
SNRNP27-204ENST00000487029 MT1FP04733 61 aa0.51□□□□□ -2.33
SNRNP27-204ENST00000487029 MT1GP13640 62 aa0.51□□□□□ -2.33
SNRNP27-204ENST00000487029 SPRR2EP22531 72 aa0.51□□□□□ -2.33
SNRNP27-204ENST00000487029 KRTAP6-2Q3LI66 62 aa0.51□□□□□ -2.33
SNRNP27-204ENST00000487029 KRTAP19-7Q3SYF9 63 aa0.5□□□□□ -2.33
SNRNP27-204ENST00000487029 ABCA13Q86UQ4 5058 aa0.5□□□□□ -2.33
SNRNP27-204ENST00000487029 UBR4Q5T4S7 5183 aa0.5□□□□□ -2.33
SNRNP27-204ENST00000487029 MT1MQ8N339 61 aa0.49□□□□□ -2.33
SNRNP27-204ENST00000487029 FAT4Q6V0I7 4981 aa0.47□□□□□ -2.33
SNRNP27-204ENST00000487029 SYNE1Q8NF91 8797 aaKnown RBP0.47□□□□□ -2.33
SNRNP27-204ENST00000487029 EPPK1P58107 5090 aaKnown RBP0.46□□□□□ -2.34
SNRNP27-204ENST00000487029 RNF213Q63HN8 5207 aa0.46□□□□□ -2.34
SNRNP27-204ENST00000487029 KIAA1109Q2LD37 5005 aa0.45□□□□□ -2.34
SNRNP27-204ENST00000487029 KRTAP21-1Q3LI58 79 aa0.45□□□□□ -2.34
SNRNP27-204ENST00000487029 USH2AO75445 5202 aa0.45□□□□□ -2.34
SNRNP27-204ENST00000487029 KRTAP6-1Q3LI64 71 aa0.42□□□□□ -2.34
SNRNP27-204ENST00000487029 MUC5ACP98088 5654 aa0.42□□□□□ -2.34
SNRNP27-204ENST00000487029 SSPOA2VEC9 5147 aa0.41□□□□□ -2.34
SNRNP27-204ENST00000487029 MDN1Q9NU22 5596 aa0.41□□□□□ -2.34
SNRNP27-204ENST00000487029 KMT2DO14686 5537 aa0.4□□□□□ -2.35
SNRNP27-204ENST00000487029 FSIP2Q5CZC0 6907 aa0.38□□□□□ -2.35
SNRNP27-204ENST00000487029 PHGR1C9JFL3 82 aa0.37□□□□□ -2.35
SNRNP27-204ENST00000487029 KRTAP19-6Q3LI70 58 aa0.37□□□□□ -2.35
SNRNP27-204ENST00000487029 NEBP20929 6669 aa0.36□□□□□ -2.35
SNRNP27-204ENST00000487029 DSTQ03001 7570 aaKnown RBP0.36□□□□□ -2.35
SNRNP27-204ENST00000487029 SYNE2Q8WXH0 6885 aaKnown RBP0.36□□□□□ -2.35
SNRNP27-204ENST00000487029 MUC12Q9UKN1 5478 aa0.34□□□□□ -2.35
SNRNP27-204ENST00000487029 KRTAP20-2Q3LI61 65 aa0.25□□□□□ -2.37
SNRNP27-204ENST00000487029 MT4P47944 62 aa0.23□□□□□ -2.37
SNRNP27-204ENST00000487029 KRTAP20-1Q3LI63 56 aa0.23□□□□□ -2.37
Retrieved 78 of 20,778 RNA–protein pairs in 115.1 ms