RNA–Protein interactions for RNA: ENST00000486148.1

TNXB-205, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 2,669 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-205ENST00000486148 KRTAP19-6Q3LI70 58 aa5.97□□□□□ -1.45
TNXB-205ENST00000486148 KRTAP4-3Q9BYR4 195 aa5.79□□□□□ -1.48
TNXB-205ENST00000486148 LCE2DQ5TA82 110 aaPredicted RBP5.78□□□□□ -1.48
TNXB-205ENST00000486148 FCGBPQ9Y6R7 5405 aaPredicted RBP5.77□□□□□ -1.49
TNXB-205ENST00000486148 LOC100996750A0A140TA64 210 aa5.75□□□□□ -1.49
TNXB-205ENST00000486148 MUC12Q9UKN1 5478 aa5.71□□□□□ -1.49
TNXB-205ENST00000486148 MT1GP13640 62 aa5.69□□□□□ -1.5
TNXB-205ENST00000486148 MT1MQ8N339 61 aa5.68□□□□□ -1.5
TNXB-205ENST00000486148 KRTAP19-3Q7Z4W3 81 aa5.67□□□□□ -1.5
TNXB-205ENST00000486148 CRCT1Q9UGL9 99 aa5.58□□□□□ -1.52
TNXB-205ENST00000486148 DSTQ03001 7570 aaKnown RBP5.53□□□□□ -1.52
TNXB-205ENST00000486148 LCE5AQ5TCM9 118 aa5.49□□□□□ -1.53
TNXB-205ENST00000486148 SPRR2FQ96RM1 72 aa5.48□□□□□ -1.53
TNXB-205ENST00000486148 KRTAP12-4P60329 112 aa5.47□□□□□ -1.53
TNXB-205ENST00000486148 MACF1Q9UPN3 7388 aaKnown RBP5.36□□□□□ -1.55
TNXB-205ENST00000486148 LCE3BQ5TA77 95 aa5.25□□□□□ -1.57
TNXB-205ENST00000486148 SYNE2Q8WXH0 6885 aaKnown RBP5.22□□□□□ -1.57
TNXB-205ENST00000486148 KRTAP4-9Q9BYQ8 210 aa5.2□□□□□ -1.58
TNXB-205ENST00000486148 SYNE1Q8NF91 8797 aaKnown RBP5.17□□□□□ -1.58
TNXB-205ENST00000486148 KRTAP6-1Q3LI64 71 aa5.17□□□□□ -1.58
TNXB-205ENST00000486148 MDN1Q9NU22 5596 aa5.16□□□□□ -1.58
TNXB-205ENST00000486148 LCE1AQ5T7P2 110 aa5.11□□□□□ -1.59
TNXB-205ENST00000486148 KRTAP9-2Q9BYQ4 174 aa5.1□□□□□ -1.59
TNXB-205ENST00000486148 MT1AP04731 61 aa5.09□□□□□ -1.6
TNXB-205ENST00000486148 KRTAP5-9P26371 169 aa5.07□□□□□ -1.6
TNXB-205ENST00000486148 KRTAP5-5Q701N2 237 aaPredicted RBP5.02□□□□□ -1.61
TNXB-205ENST00000486148 KRTAP9-7A8MTY7 169 aa4.98□□□□□ -1.61
TNXB-205ENST00000486148 SPRR2EP22531 72 aa4.97□□□□□ -1.61
TNXB-205ENST00000486148 SPRR2BP35325 72 aa4.97□□□□□ -1.61
TNXB-205ENST00000486148 SPRR2AP35326 72 aa4.97□□□□□ -1.61
TNXB-205ENST00000486148 PRM1P04553 51 aa4.94□□□□□ -1.62
TNXB-205ENST00000486148 LCE3DQ9BYE3 92 aa4.92□□□□□ -1.62
TNXB-205ENST00000486148 OBSCNQ5VST9 7968 aa4.92□□□□□ -1.62
TNXB-205ENST00000486148 LCE3EQ5T5B0 92 aa4.86□□□□□ -1.63
TNXB-205ENST00000486148 KRTAP9-4Q9BYQ2 154 aa4.79□□□□□ -1.64
TNXB-205ENST00000486148 SPRR2DP22532 72 aa4.75□□□□□ -1.65
TNXB-205ENST00000486148 KRTAP9-6A0A140TA67 174 aa4.74□□□□□ -1.65
TNXB-205ENST00000486148 KRTAP6-3Q3LI67 103 aa4.74□□□□□ -1.65
TNXB-205ENST00000486148 KRTAP6-2Q3LI66 62 aa4.63□□□□□ -1.67
TNXB-205ENST00000486148 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.57□□□□□ -1.68
TNXB-205ENST00000486148 MT3P25713 68 aa4.56□□□□□ -1.68
TNXB-205ENST00000486148 KRTAP2-2Q9BYT5 123 aa4.52□□□□□ -1.69
TNXB-205ENST00000486148 KRTAP5-4Q6L8H1 288 aa4.4□□□□□ -1.71
TNXB-205ENST00000486148 KRTAP4-6Q9BYQ5 205 aa4.27□□□□□ -1.73
TNXB-205ENST00000486148 NEBP20929 6669 aa4.26□□□□□ -1.73
TNXB-205ENST00000486148 MT4P47944 62 aa4.21□□□□□ -1.74
TNXB-205ENST00000486148 LCE1EQ5T753 118 aa4.2□□□□□ -1.74
TNXB-205ENST00000486148 KRTAP20-2Q3LI61 65 aa4.14□□□□□ -1.75
TNXB-205ENST00000486148 KRTAP5-2Q701N4 177 aa4.12□□□□□ -1.75
TNXB-205ENST00000486148 LCE4AQ5TA78 99 aa4.08□□□□□ -1.76
TNXB-205ENST00000486148 LCE1DQ5T752 114 aa4.05□□□□□ -1.76
TNXB-205ENST00000486148 HMCN1Q96RW7 5635 aa4.01□□□□□ -1.77
TNXB-205ENST00000486148 KRTAP5-3Q6L8H2 238 aa3.95□□□□□ -1.78
TNXB-205ENST00000486148 KRTAP20-1Q3LI63 56 aa3.88□□□□□ -1.79
TNXB-205ENST00000486148 MUC5ACP98088 5654 aa3.86□□□□□ -1.79
TNXB-205ENST00000486148 LCE1BQ5T7P3 118 aa3.7□□□□□ -1.82
TNXB-205ENST00000486148 KRTAP4-11Q9BYQ6 195 aa3.7□□□□□ -1.82
TNXB-205ENST00000486148 KRTAP5-10Q6L8G5 202 aa3.62□□□□□ -1.83
TNXB-205ENST00000486148 KRTAP5-1Q6L8H4 278 aa3.58□□□□□ -1.84
TNXB-205ENST00000486148 KRTAP4-2Q9BYR5 136 aa3.57□□□□□ -1.84
TNXB-205ENST00000486148 LCE1CQ5T751 118 aa3.52□□□□□ -1.85
TNXB-205ENST00000486148 MUC19Q7Z5P9 8384 aa3.39□□□□□ -1.87
TNXB-205ENST00000486148 KRTAP21-2Q3LI59 83 aa3.34□□□□□ -1.88
TNXB-205ENST00000486148 LCE1FQ5T754 118 aa3.33□□□□□ -1.88
TNXB-205ENST00000486148 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.32□□□□□ -1.88
TNXB-205ENST00000486148 KRTAP5-8O75690 187 aa3.27□□□□□ -1.89
TNXB-205ENST00000486148 KRTAP5-7Q6L8G8 165 aa3.21□□□□□ -1.9
TNXB-205ENST00000486148 AHNAK2Q8IVF2 5795 aa3.16□□□□□ -1.9
TNXB-205ENST00000486148 KRTAP21-1Q3LI58 79 aa3.15□□□□□ -1.91
TNXB-205ENST00000486148 KRTAP4-4Q9BYR3 166 aa3.1□□□□□ -1.91
TNXB-205ENST00000486148 KRTAP5-11Q6L8G4 156 aa3.02□□□□□ -1.93
TNXB-205ENST00000486148 MUC5BQ9HC84 5762 aaPredicted RBP3.01□□□□□ -1.93
TNXB-205ENST00000486148 KRTAP4-12Q9BQ66 201 aa2.89□□□□□ -1.95
TNXB-205ENST00000486148 GPR98Q8WXG9 6306 aa2.85□□□□□ -1.95
TNXB-205ENST00000486148 KRTAP9-9Q9BYP9 154 aa2.72□□□□□ -1.97
TNXB-205ENST00000486148 PHGR1C9JFL3 82 aa2.62□□□□□ -1.99
TNXB-205ENST00000486148 AHNAKQ09666 5890 aaKnown RBP2.31□□□□□ -2.04
TNXB-205ENST00000486148 MUC16Q8WXI7 14507 aa1.75□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 69.6 ms