RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 K7ERS5 55 aa4.58□□□□□ -1.68
PTCD1-205ENST00000485746 PSPHP1O15172 72 aa4.58□□□□□ -1.68
PTCD1-205ENST00000485746 PCP4P48539 62 aa4.57□□□□□ -1.68
PTCD1-205ENST00000485746 LCE3AQ5TA76 89 aa4.57□□□□□ -1.68
PTCD1-205ENST00000485746 LCE5AQ5TCM9 118 aa4.56□□□□□ -1.68
PTCD1-205ENST00000485746 Q1T7F1 81 aa4.54□□□□□ -1.68
PTCD1-205ENST00000485746 PP632Q6XCG6 107 aa4.51□□□□□ -1.69
PTCD1-205ENST00000485746 MT1GP13640 62 aa4.5□□□□□ -1.69
PTCD1-205ENST00000485746 A6NED7 52 aa4.46□□□□□ -1.7
PTCD1-205ENST00000485746 MT1LQ93083 61 aa4.45□□□□□ -1.7
PTCD1-205ENST00000485746 KRTAP4-12Q9BQ66 201 aa4.45□□□□□ -1.7
PTCD1-205ENST00000485746 KRTAP25-1Q3LHN0 102 aa4.43□□□□□ -1.7
PTCD1-205ENST00000485746 MT1MQ8N339 61 aa4.41□□□□□ -1.7
PTCD1-205ENST00000485746 KRTAP12-3P60328 96 aa4.4□□□□□ -1.71
PTCD1-205ENST00000485746 RPS28P62857 69 aaKnown RBP4.38□□□□□ -1.71
PTCD1-205ENST00000485746 LCE4AQ5TA78 99 aa4.33□□□□□ -1.72
PTCD1-205ENST00000485746 A0A0A0MQY5 61 aa4.32□□□□□ -1.72
PTCD1-205ENST00000485746 KRTAP4-9Q9BYQ8 210 aa4.3□□□□□ -1.72
PTCD1-205ENST00000485746 KRTAP4-3Q9BYR4 195 aa4.3□□□□□ -1.72
PTCD1-205ENST00000485746 CDC42SE1Q9NRR8 79 aa4.3□□□□□ -1.72
PTCD1-205ENST00000485746 DSTQ03001 7570 aaKnown RBP4.28□□□□□ -1.72
PTCD1-205ENST00000485746 KRTAP4-7Q9BYR0 210 aa4.24□□□□□ -1.73
PTCD1-205ENST00000485746 ROMO1P60602 79 aa4.22□□□□□ -1.73
PTCD1-205ENST00000485746 MT4P47944 62 aa4.2□□□□□ -1.74
PTCD1-205ENST00000485746 KRTAP15-1Q3LI76 137 aa4.19□□□□□ -1.74
PTCD1-205ENST00000485746 LCE1DQ5T752 114 aa4.19□□□□□ -1.74
PTCD1-205ENST00000485746 KRTAP9-9Q9BYP9 154 aa4.15□□□□□ -1.75
PTCD1-205ENST00000485746 KRTAP9-4Q9BYQ2 154 aa4.15□□□□□ -1.75
PTCD1-205ENST00000485746 KRTAP5-4Q6L8H1 288 aa4.11□□□□□ -1.75
PTCD1-205ENST00000485746 LCE3CQ5T5A8 94 aa4.05□□□□□ -1.76
PTCD1-205ENST00000485746 HMCN1Q96RW7 5635 aa3.99□□□□□ -1.77
PTCD1-205ENST00000485746 KRTAP5-5Q701N2 237 aaPredicted RBP3.98□□□□□ -1.77
PTCD1-205ENST00000485746 KRTAP12-4P60329 112 aa3.97□□□□□ -1.77
PTCD1-205ENST00000485746 GPR98Q8WXG9 6306 aa3.96□□□□□ -1.78
PTCD1-205ENST00000485746 BRK1Q8WUW1 75 aa3.92□□□□□ -1.78
PTCD1-205ENST00000485746 KRTAP20-2Q3LI61 65 aa3.91□□□□□ -1.78
PTCD1-205ENST00000485746 SPRR5A0A1B0GTR4 108 aa3.89□□□□□ -1.79
PTCD1-205ENST00000485746 KRTAP5-10Q6L8G5 202 aa3.81□□□□□ -1.8
PTCD1-205ENST00000485746 AHNAK2Q8IVF2 5795 aa3.8□□□□□ -1.8
PTCD1-205ENST00000485746 MT1AP04731 61 aa3.79□□□□□ -1.8
PTCD1-205ENST00000485746 SYNE1Q8NF91 8797 aaKnown RBP3.79□□□□□ -1.8
PTCD1-205ENST00000485746 KRTAP4-11Q9BYQ6 195 aa3.78□□□□□ -1.8
PTCD1-205ENST00000485746 KRTAP5-3Q6L8H2 238 aa3.77□□□□□ -1.81
PTCD1-205ENST00000485746 KRTAP9-6A8MVA2 160 aa3.76□□□□□ -1.81
PTCD1-205ENST00000485746 KRTAP6-1Q3LI64 71 aa3.76□□□□□ -1.81
PTCD1-205ENST00000485746 PMAIP1Q13794 54 aa3.7□□□□□ -1.82
PTCD1-205ENST00000485746 PRO0628Q9UI54 55 aa3.68□□□□□ -1.82
PTCD1-205ENST00000485746 KRTAP5-7Q6L8G8 165 aa3.66□□□□□ -1.82
PTCD1-205ENST00000485746 KRTAP4-2Q9BYR5 136 aa3.66□□□□□ -1.82
PTCD1-205ENST00000485746 KRTAP5-2Q701N4 177 aa3.61□□□□□ -1.83
PTCD1-205ENST00000485746 KRTAP6-2Q3LI66 62 aa3.59□□□□□ -1.83
PTCD1-205ENST00000485746 PRAC1Q96KF2 57 aa3.58□□□□□ -1.84
PTCD1-205ENST00000485746 MT3P25713 68 aa3.5□□□□□ -1.85
PTCD1-205ENST00000485746 KRTAP5-8O75690 187 aa3.4□□□□□ -1.87
PTCD1-205ENST00000485746 KTN1-AS1Q86SY8 53 aa3.4□□□□□ -1.87
PTCD1-205ENST00000485746 NDUFAF8A1L188 74 aa3.36□□□□□ -1.87
PTCD1-205ENST00000485746 KRTAP5-1Q6L8H4 278 aa3.23□□□□□ -1.89
PTCD1-205ENST00000485746 OBSCNQ5VST9 7968 aa3.22□□□□□ -1.89
PTCD1-205ENST00000485746 LCE1EQ5T753 118 aa3.14□□□□□ -1.91
PTCD1-205ENST00000485746 MUC5BQ9HC84 5762 aaPredicted RBP3.09□□□□□ -1.92
PTCD1-205ENST00000485746 MUC5ACP98088 5654 aa3.06□□□□□ -1.92
PTCD1-205ENST00000485746 AHNAKQ09666 5890 aaKnown RBP3.05□□□□□ -1.92
PTCD1-205ENST00000485746 LUZP6Q538Z0 58 aa3.03□□□□□ -1.92
PTCD1-205ENST00000485746 LCE1BQ5T7P3 118 aa3.03□□□□□ -1.92
PTCD1-205ENST00000485746 LCE1FQ5T754 118 aa3.01□□□□□ -1.93
PTCD1-205ENST00000485746 LCE3DQ9BYE3 92 aa2.96□□□□□ -1.94
PTCD1-205ENST00000485746 LCE1CQ5T751 118 aa2.92□□□□□ -1.94
PTCD1-205ENST00000485746 LCE3EQ5T5B0 92 aa2.81□□□□□ -1.96
PTCD1-205ENST00000485746 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.63□□□□□ -1.99
PTCD1-205ENST00000485746 KRTAP5-11Q6L8G4 156 aa2.62□□□□□ -1.99
PTCD1-205ENST00000485746 KRTAP21-2Q3LI59 83 aa2.45□□□□□ -2.02
PTCD1-205ENST00000485746 INE1O15225 51 aa2.29□□□□□ -2.04
PTCD1-205ENST00000485746 KRTAP4-4Q9BYR3 166 aa2.29□□□□□ -2.04
PTCD1-205ENST00000485746 PHGR1C9JFL3 82 aa2.27□□□□□ -2.05
PTCD1-205ENST00000485746 PRM1P04553 51 aa2.16□□□□□ -2.06
PTCD1-205ENST00000485746 MUC19Q7Z5P9 8384 aa1.99□□□□□ -2.09
PTCD1-205ENST00000485746 KRTAP21-1Q3LI58 79 aa1.72□□□□□ -2.13
PTCD1-205ENST00000485746 MUC16Q8WXI7 14507 aa1.5□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 37.6 ms