RNA–Protein interactions for RNA: ENST00000485535.5

PLXNB1-218, Transcript of plexin B1, humanhuman

TSL 2

Gene PLXNB1, Length 3,264 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB1-218ENST00000485535 KRTAP2-3P0C7H8 128 aa4.23□□□□□ -1.73
PLXNB1-218ENST00000485535 KRTAP2-4Q9BYR9 128 aa4.23□□□□□ -1.73
PLXNB1-218ENST00000485535 KRTAP2-1Q9BYU5 128 aa4.23□□□□□ -1.73
PLXNB1-218ENST00000485535 MT1LQ93083 61 aa4.22□□□□□ -1.73
PLXNB1-218ENST00000485535 MACF1Q9UPN3 7388 aaKnown RBP4.2□□□□□ -1.74
PLXNB1-218ENST00000485535 KRTAP19-4Q3LI73 84 aa4.2□□□□□ -1.74
PLXNB1-218ENST00000485535 MT1EP04732 61 aa4.19□□□□□ -1.74
PLXNB1-218ENST00000485535 SYNE2Q8WXH0 6885 aaKnown RBP4.15□□□□□ -1.75
PLXNB1-218ENST00000485535 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.12□□□□□ -1.75
PLXNB1-218ENST00000485535 DSTQ03001 7570 aaKnown RBP4.1□□□□□ -1.75
PLXNB1-218ENST00000485535 MUC12Q9UKN1 5478 aa4.09□□□□□ -1.76
PLXNB1-218ENST00000485535 LOC100996750A0A140TA64 210 aa4.04□□□□□ -1.76
PLXNB1-218ENST00000485535 MT1GP13640 62 aa4.03□□□□□ -1.76
PLXNB1-218ENST00000485535 SPRR2FQ96RM1 72 aa4.03□□□□□ -1.76
PLXNB1-218ENST00000485535 KRTAP4-3Q9BYR4 195 aa4.03□□□□□ -1.76
PLXNB1-218ENST00000485535 KRTAP6-3Q3LI67 103 aa4□□□□□ -1.77
PLXNB1-218ENST00000485535 KRTAP5-9P26371 169 aa3.99□□□□□ -1.77
PLXNB1-218ENST00000485535 KRTAP9-7A8MTY7 169 aa3.94□□□□□ -1.78
PLXNB1-218ENST00000485535 KRTAP12-4P60329 112 aa3.92□□□□□ -1.78
PLXNB1-218ENST00000485535 MT1MQ8N339 61 aa3.92□□□□□ -1.78
PLXNB1-218ENST00000485535 KRTAP19-3Q7Z4W3 81 aa3.91□□□□□ -1.78
PLXNB1-218ENST00000485535 MDN1Q9NU22 5596 aa3.87□□□□□ -1.79
PLXNB1-218ENST00000485535 SYNE1Q8NF91 8797 aaKnown RBP3.86□□□□□ -1.79
PLXNB1-218ENST00000485535 SPRR2EP22531 72 aa3.85□□□□□ -1.79
PLXNB1-218ENST00000485535 SPRR2BP35325 72 aa3.85□□□□□ -1.79
PLXNB1-218ENST00000485535 SPRR2AP35326 72 aa3.85□□□□□ -1.79
PLXNB1-218ENST00000485535 LCE1AQ5T7P2 110 aa3.85□□□□□ -1.79
PLXNB1-218ENST00000485535 OBSCNQ5VST9 7968 aa3.83□□□□□ -1.8
PLXNB1-218ENST00000485535 LCE5AQ5TCM9 118 aa3.81□□□□□ -1.8
PLXNB1-218ENST00000485535 LCE3BQ5TA77 95 aa3.81□□□□□ -1.8
PLXNB1-218ENST00000485535 NEBP20929 6669 aa3.74□□□□□ -1.81
PLXNB1-218ENST00000485535 SPRR2DP22532 72 aa3.72□□□□□ -1.81
PLXNB1-218ENST00000485535 KRTAP4-9Q9BYQ8 210 aa3.71□□□□□ -1.82
PLXNB1-218ENST00000485535 LCE3DQ9BYE3 92 aa3.61□□□□□ -1.83
PLXNB1-218ENST00000485535 KRTAP6-1Q3LI64 71 aa3.6□□□□□ -1.83
PLXNB1-218ENST00000485535 MT1AP04731 61 aa3.57□□□□□ -1.84
PLXNB1-218ENST00000485535 LCE3EQ5T5B0 92 aa3.57□□□□□ -1.84
PLXNB1-218ENST00000485535 KRTAP20-1Q3LI63 56 aa3.5□□□□□ -1.85
PLXNB1-218ENST00000485535 PRM1P04553 51 aa3.48□□□□□ -1.85
PLXNB1-218ENST00000485535 KRTAP2-2Q9BYT5 123 aa3.45□□□□□ -1.86
PLXNB1-218ENST00000485535 KRTAP5-5Q701N2 237 aaPredicted RBP3.39□□□□□ -1.87
PLXNB1-218ENST00000485535 LCE1EQ5T753 118 aa3.33□□□□□ -1.88
PLXNB1-218ENST00000485535 KRTAP9-4Q9BYQ2 154 aa3.31□□□□□ -1.88
PLXNB1-218ENST00000485535 KRTAP6-2Q3LI66 62 aa3.31□□□□□ -1.88
PLXNB1-218ENST00000485535 KRTAP5-4Q6L8H1 288 aa3.31□□□□□ -1.88
PLXNB1-218ENST00000485535 LCE4AQ5TA78 99 aa3.29□□□□□ -1.88
PLXNB1-218ENST00000485535 MT4P47944 62 aa3.26□□□□□ -1.89
PLXNB1-218ENST00000485535 MT3P25713 68 aa3.23□□□□□ -1.89
PLXNB1-218ENST00000485535 KRTAP4-6Q9BYQ5 205 aa3.18□□□□□ -1.9
PLXNB1-218ENST00000485535 LCE1DQ5T752 114 aa3.18□□□□□ -1.9
PLXNB1-218ENST00000485535 LCE1FQ5T754 118 aa3.18□□□□□ -1.9
PLXNB1-218ENST00000485535 HMCN1Q96RW7 5635 aa3.12□□□□□ -1.91
PLXNB1-218ENST00000485535 KRTAP20-2Q3LI61 65 aa3.11□□□□□ -1.91
PLXNB1-218ENST00000485535 MUC19Q7Z5P9 8384 aa3.08□□□□□ -1.92
PLXNB1-218ENST00000485535 KRTAP5-3Q6L8H2 238 aa2.99□□□□□ -1.93
PLXNB1-218ENST00000485535 KRTAP5-2Q701N4 177 aa2.97□□□□□ -1.93
PLXNB1-218ENST00000485535 GPR98Q8WXG9 6306 aa2.95□□□□□ -1.94
PLXNB1-218ENST00000485535 AHNAK2Q8IVF2 5795 aa2.81□□□□□ -1.96
PLXNB1-218ENST00000485535 KRTAP4-11Q9BYQ6 195 aa2.73□□□□□ -1.97
PLXNB1-218ENST00000485535 MUC5ACP98088 5654 aa2.7□□□□□ -1.98
PLXNB1-218ENST00000485535 KRTAP5-10Q6L8G5 202 aa2.69□□□□□ -1.98
PLXNB1-218ENST00000485535 LCE1BQ5T7P3 118 aa2.69□□□□□ -1.98
PLXNB1-218ENST00000485535 KRTAP9-9Q9BYP9 154 aa2.69□□□□□ -1.98
PLXNB1-218ENST00000485535 KRTAP5-8O75690 187 aa2.62□□□□□ -1.99
PLXNB1-218ENST00000485535 KRTAP5-1Q6L8H4 278 aa2.59□□□□□ -1.99
PLXNB1-218ENST00000485535 KRTAP5-7Q6L8G8 165 aa2.51□□□□□ -2.01
PLXNB1-218ENST00000485535 LCE1CQ5T751 118 aa2.46□□□□□ -2.02
PLXNB1-218ENST00000485535 KRTAP4-2Q9BYR5 136 aa2.46□□□□□ -2.02
PLXNB1-218ENST00000485535 MUC5BQ9HC84 5762 aaPredicted RBP2.37□□□□□ -2.03
PLXNB1-218ENST00000485535 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.28□□□□□ -2.04
PLXNB1-218ENST00000485535 KRTAP21-2Q3LI59 83 aa2.25□□□□□ -2.05
PLXNB1-218ENST00000485535 KRTAP4-12Q9BQ66 201 aa2.24□□□□□ -2.05
PLXNB1-218ENST00000485535 KRTAP4-4Q9BYR3 166 aa2.21□□□□□ -2.06
PLXNB1-218ENST00000485535 AHNAKQ09666 5890 aaKnown RBP2.19□□□□□ -2.06
PLXNB1-218ENST00000485535 KRTAP5-11Q6L8G4 156 aa2.18□□□□□ -2.06
PLXNB1-218ENST00000485535 KRTAP21-1Q3LI58 79 aa2.1□□□□□ -2.07
PLXNB1-218ENST00000485535 PHGR1C9JFL3 82 aa1.87□□□□□ -2.11
PLXNB1-218ENST00000485535 MUC16Q8WXI7 14507 aa1.19□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 116.9 ms