RNA–Protein interactions for RNA: ENST00000484574.1

POLR1B-213, Transcript of RNA polymerase I subunit B, humanhuman

TSL 2

Gene POLR1B, Length 551 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-213ENST00000484574 MT1MQ8N339 61 aa4.24□□□□□ -1.73
POLR1B-213ENST00000484574 Q1T7F1 81 aa4.23□□□□□ -1.73
POLR1B-213ENST00000484574 KRTAP25-1Q3LHN0 102 aa4.21□□□□□ -1.74
POLR1B-213ENST00000484574 DSTQ03001 7570 aaKnown RBP4.19□□□□□ -1.74
POLR1B-213ENST00000484574 KRTAP12-3P60328 96 aa4.17□□□□□ -1.74
POLR1B-213ENST00000484574 LCE4AQ5TA78 99 aa4.16□□□□□ -1.74
POLR1B-213ENST00000484574 KRTAP19-4Q3LI73 84 aa4.15□□□□□ -1.75
POLR1B-213ENST00000484574 KRTAP23-1A1A580 65 aa4.13□□□□□ -1.75
POLR1B-213ENST00000484574 PSPHP1O15172 72 aa4.13□□□□□ -1.75
POLR1B-213ENST00000484574 KRTAP4-9Q9BYQ8 210 aa4.1□□□□□ -1.75
POLR1B-213ENST00000484574 KRTAP5-4Q6L8H1 288 aa4.08□□□□□ -1.76
POLR1B-213ENST00000484574 LCE1DQ5T752 114 aa4.07□□□□□ -1.76
POLR1B-213ENST00000484574 RPS28P62857 69 aaKnown RBP4.06□□□□□ -1.76
POLR1B-213ENST00000484574 KRTAP4-3Q9BYR4 195 aa4.04□□□□□ -1.76
POLR1B-213ENST00000484574 A6NED7 52 aa4.03□□□□□ -1.76
POLR1B-213ENST00000484574 MT4P47944 62 aa3.99□□□□□ -1.77
POLR1B-213ENST00000484574 CDC42SE1Q9NRR8 79 aa3.98□□□□□ -1.77
POLR1B-213ENST00000484574 KRTAP4-7Q9BYR0 210 aa3.97□□□□□ -1.77
POLR1B-213ENST00000484574 KRTAP15-1Q3LI76 137 aa3.93□□□□□ -1.78
POLR1B-213ENST00000484574 PCP4P48539 62 aa3.91□□□□□ -1.78
POLR1B-213ENST00000484574 KRTAP5-5Q701N2 237 aaPredicted RBP3.91□□□□□ -1.78
POLR1B-213ENST00000484574 HMCN1Q96RW7 5635 aa3.9□□□□□ -1.78
POLR1B-213ENST00000484574 ROMO1P60602 79 aa3.9□□□□□ -1.79
POLR1B-213ENST00000484574 KRTAP4-6Q9BYQ5 205 aa3.89□□□□□ -1.79
POLR1B-213ENST00000484574 SPRR5A0A1B0GTR4 108 aa3.87□□□□□ -1.79
POLR1B-213ENST00000484574 LCE3CQ5T5A8 94 aa3.86□□□□□ -1.79
POLR1B-213ENST00000484574 GPR98Q8WXG9 6306 aa3.84□□□□□ -1.79
POLR1B-213ENST00000484574 KRTAP12-4P60329 112 aa3.84□□□□□ -1.79
POLR1B-213ENST00000484574 KRTAP20-2Q3LI61 65 aa3.8□□□□□ -1.8
POLR1B-213ENST00000484574 KRTAP5-10Q6L8G5 202 aa3.79□□□□□ -1.8
POLR1B-213ENST00000484574 LOC100996750A0A140TA64 210 aa3.76□□□□□ -1.81
POLR1B-213ENST00000484574 KRTAP5-3Q6L8H2 238 aa3.7□□□□□ -1.82
POLR1B-213ENST00000484574 AHNAK2Q8IVF2 5795 aa3.68□□□□□ -1.82
POLR1B-213ENST00000484574 KRTAP5-7Q6L8G8 165 aa3.67□□□□□ -1.82
POLR1B-213ENST00000484574 MT1AP04731 61 aa3.66□□□□□ -1.82
POLR1B-213ENST00000484574 KRTAP6-1Q3LI64 71 aa3.58□□□□□ -1.84
POLR1B-213ENST00000484574 KRTAP5-2Q701N4 177 aa3.57□□□□□ -1.84
POLR1B-213ENST00000484574 KRTAP9-6A8MVA2 160 aa3.56□□□□□ -1.84
POLR1B-213ENST00000484574 SYNE1Q8NF91 8797 aaKnown RBP3.56□□□□□ -1.84
POLR1B-213ENST00000484574 KRTAP9-4Q9BYQ2 154 aa3.54□□□□□ -1.84
POLR1B-213ENST00000484574 KRTAP4-11Q9BYQ6 195 aa3.48□□□□□ -1.85
POLR1B-213ENST00000484574 BRK1Q8WUW1 75 aa3.45□□□□□ -1.86
POLR1B-213ENST00000484574 KRTAP6-2Q3LI66 62 aa3.42□□□□□ -1.86
POLR1B-213ENST00000484574 MT3P25713 68 aa3.37□□□□□ -1.87
POLR1B-213ENST00000484574 KRTAP5-8O75690 187 aa3.35□□□□□ -1.87
POLR1B-213ENST00000484574 SVIPQ8NHG7 77 aa3.34□□□□□ -1.87
POLR1B-213ENST00000484574 PMAIP1Q13794 54 aa3.29□□□□□ -1.88
POLR1B-213ENST00000484574 KRTAP9-9Q9BYP9 154 aa3.19□□□□□ -1.9
POLR1B-213ENST00000484574 KRTAP5-1Q6L8H4 278 aa3.18□□□□□ -1.9
POLR1B-213ENST00000484574 OBSCNQ5VST9 7968 aa3.15□□□□□ -1.91
POLR1B-213ENST00000484574 LCE1EQ5T753 118 aa3.13□□□□□ -1.91
POLR1B-213ENST00000484574 PRO0628Q9UI54 55 aa3.07□□□□□ -1.92
POLR1B-213ENST00000484574 MUC5ACP98088 5654 aa3.07□□□□□ -1.92
POLR1B-213ENST00000484574 PRAC1Q96KF2 57 aa3.06□□□□□ -1.92
POLR1B-213ENST00000484574 KRTAP4-12Q9BQ66 201 aa3.06□□□□□ -1.92
POLR1B-213ENST00000484574 MUC5BQ9HC84 5762 aaPredicted RBP3.06□□□□□ -1.92
POLR1B-213ENST00000484574 AHNAKQ09666 5890 aaKnown RBP2.99□□□□□ -1.93
POLR1B-213ENST00000484574 KTN1-AS1Q86SY8 53 aa2.93□□□□□ -1.94
POLR1B-213ENST00000484574 LCE1CQ5T751 118 aa2.89□□□□□ -1.95
POLR1B-213ENST00000484574 LCE1BQ5T7P3 118 aa2.89□□□□□ -1.95
POLR1B-213ENST00000484574 KRTAP4-2Q9BYR5 136 aa2.87□□□□□ -1.95
POLR1B-213ENST00000484574 LCE3DQ9BYE3 92 aa2.8□□□□□ -1.96
POLR1B-213ENST00000484574 LUZP6Q538Z0 58 aa2.73□□□□□ -1.97
POLR1B-213ENST00000484574 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.65□□□□□ -1.99
POLR1B-213ENST00000484574 LCE3EQ5T5B0 92 aa2.64□□□□□ -1.99
POLR1B-213ENST00000484574 KRTAP5-11Q6L8G4 156 aa2.61□□□□□ -1.99
POLR1B-213ENST00000484574 LCE1FQ5T754 118 aa2.58□□□□□ -2
POLR1B-213ENST00000484574 KRTAP21-2Q3LI59 83 aa2.39□□□□□ -2.03
POLR1B-213ENST00000484574 H3BS24 57 aa2.35□□□□□ -2.03
POLR1B-213ENST00000484574 PHGR1C9JFL3 82 aa2.24□□□□□ -2.05
POLR1B-213ENST00000484574 A0A0A0MQY5 61 aa2.11□□□□□ -2.07
POLR1B-213ENST00000484574 NDUFAF8A1L188 74 aa2.09□□□□□ -2.07
POLR1B-213ENST00000484574 KRTAP4-4Q9BYR3 166 aa2.08□□□□□ -2.08
POLR1B-213ENST00000484574 PRM1P04553 51 aa1.94□□□□□ -2.1
POLR1B-213ENST00000484574 MUC19Q7Z5P9 8384 aa1.92□□□□□ -2.1
POLR1B-213ENST00000484574 INE1O15225 51 aa1.79□□□□□ -2.12
POLR1B-213ENST00000484574 KRTAP21-1Q3LI58 79 aa1.71□□□□□ -2.14
POLR1B-213ENST00000484574 MUC16Q8WXI7 14507 aa1.4□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 12.7 ms