RNA–Protein interactions for RNA: ENST00000484134.5

RPUSD3-216, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,491 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-216ENST00000484134 KRTAP9-6A0A140TA67 174 aa6.81□□□□□ -1.32
RPUSD3-216ENST00000484134 KRTAP9-7A8MTY7 169 aa6.81□□□□□ -1.32
RPUSD3-216ENST00000484134 KRTAP4-12Q9BQ66 201 aa6.77□□□□□ -1.33
RPUSD3-216ENST00000484134 MT1LQ93083 61 aa6.71□□□□□ -1.34
RPUSD3-216ENST00000484134 KRTAP9-2Q9BYQ4 174 aa6.65□□□□□ -1.34
RPUSD3-216ENST00000484134 MT1EP04732 61 aa6.65□□□□□ -1.35
RPUSD3-216ENST00000484134 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.62□□□□□ -1.35
RPUSD3-216ENST00000484134 KRTAP9-9Q9BYP9 154 aa6.58□□□□□ -1.36
RPUSD3-216ENST00000484134 KRTAP9-4Q9BYQ2 154 aa6.58□□□□□ -1.36
RPUSD3-216ENST00000484134 SSPOA2VEC9 5147 aa6.54□□□□□ -1.36
RPUSD3-216ENST00000484134 FSIP2Q5CZC0 6907 aa6.51□□□□□ -1.37
RPUSD3-216ENST00000484134 LCE3BQ5TA77 95 aa6.45□□□□□ -1.38
RPUSD3-216ENST00000484134 KRTAP4-3Q9BYR4 195 aa6.43□□□□□ -1.38
RPUSD3-216ENST00000484134 MT1GP13640 62 aa6.34□□□□□ -1.4
RPUSD3-216ENST00000484134 KRTAP19-6Q3LI70 58 aa6.3□□□□□ -1.4
RPUSD3-216ENST00000484134 KRTAP12-4P60329 112 aa6.24□□□□□ -1.41
RPUSD3-216ENST00000484134 FCGBPQ9Y6R7 5405 aaPredicted RBP6.23□□□□□ -1.41
RPUSD3-216ENST00000484134 MUC12Q9UKN1 5478 aa6.22□□□□□ -1.41
RPUSD3-216ENST00000484134 CRCT1Q9UGL9 99 aa6.2□□□□□ -1.42
RPUSD3-216ENST00000484134 MT1MQ8N339 61 aa6.19□□□□□ -1.42
RPUSD3-216ENST00000484134 KRTAP19-3Q7Z4W3 81 aa6.11□□□□□ -1.43
RPUSD3-216ENST00000484134 LCE5AQ5TCM9 118 aa6.1□□□□□ -1.43
RPUSD3-216ENST00000484134 LCE1DQ5T752 114 aa6.03□□□□□ -1.44
RPUSD3-216ENST00000484134 DSTQ03001 7570 aaKnown RBP6.01□□□□□ -1.45
RPUSD3-216ENST00000484134 KRTAP4-9Q9BYQ8 210 aa5.95□□□□□ -1.46
RPUSD3-216ENST00000484134 MACF1Q9UPN3 7388 aaKnown RBP5.91□□□□□ -1.46
RPUSD3-216ENST00000484134 SYNE1Q8NF91 8797 aaKnown RBP5.81□□□□□ -1.48
RPUSD3-216ENST00000484134 MT1AP04731 61 aa5.76□□□□□ -1.49
RPUSD3-216ENST00000484134 SYNE2Q8WXH0 6885 aaKnown RBP5.76□□□□□ -1.49
RPUSD3-216ENST00000484134 KRTAP6-1Q3LI64 71 aa5.73□□□□□ -1.49
RPUSD3-216ENST00000484134 SPRR2FQ96RM1 72 aa5.73□□□□□ -1.49
RPUSD3-216ENST00000484134 KRTAP4-11Q9BYQ6 195 aa5.7□□□□□ -1.5
RPUSD3-216ENST00000484134 LCE3DQ9BYE3 92 aa5.66□□□□□ -1.5
RPUSD3-216ENST00000484134 KRTAP5-5Q701N2 237 aaPredicted RBP5.65□□□□□ -1.51
RPUSD3-216ENST00000484134 LCE3EQ5T5B0 92 aa5.6□□□□□ -1.51
RPUSD3-216ENST00000484134 PRM1P04553 51 aa5.57□□□□□ -1.52
RPUSD3-216ENST00000484134 MDN1Q9NU22 5596 aa5.56□□□□□ -1.52
RPUSD3-216ENST00000484134 KRTAP4-2Q9BYR5 136 aa5.52□□□□□ -1.53
RPUSD3-216ENST00000484134 LCE1AQ5T7P2 110 aa5.51□□□□□ -1.53
RPUSD3-216ENST00000484134 KRTAP5-9P26371 169 aa5.5□□□□□ -1.53
RPUSD3-216ENST00000484134 KRTAP6-2Q3LI66 62 aa5.31□□□□□ -1.56
RPUSD3-216ENST00000484134 SPRR2EP22531 72 aa5.29□□□□□ -1.56
RPUSD3-216ENST00000484134 SPRR2BP35325 72 aa5.29□□□□□ -1.56
RPUSD3-216ENST00000484134 SPRR2AP35326 72 aa5.29□□□□□ -1.56
RPUSD3-216ENST00000484134 KRTAP6-3Q3LI67 103 aa5.28□□□□□ -1.56
RPUSD3-216ENST00000484134 OBSCNQ5VST9 7968 aa5.16□□□□□ -1.58
RPUSD3-216ENST00000484134 SPRR2DP22532 72 aa5.08□□□□□ -1.6
RPUSD3-216ENST00000484134 NEBP20929 6669 aa5.06□□□□□ -1.6
RPUSD3-216ENST00000484134 KRTAP2-2Q9BYT5 123 aa5.04□□□□□ -1.6
RPUSD3-216ENST00000484134 LCE1FQ5T754 118 aa4.98□□□□□ -1.61
RPUSD3-216ENST00000484134 MT3P25713 68 aa4.97□□□□□ -1.61
RPUSD3-216ENST00000484134 KRTAP5-3Q6L8H2 238 aa4.67□□□□□ -1.66
RPUSD3-216ENST00000484134 KRTAP5-4Q6L8H1 288 aa4.64□□□□□ -1.67
RPUSD3-216ENST00000484134 MT4P47944 62 aa4.47□□□□□ -1.69
RPUSD3-216ENST00000484134 KRTAP20-1Q3LI63 56 aa4.45□□□□□ -1.7
RPUSD3-216ENST00000484134 HMCN1Q96RW7 5635 aa4.43□□□□□ -1.7
RPUSD3-216ENST00000484134 MUC5ACP98088 5654 aa4.36□□□□□ -1.71
RPUSD3-216ENST00000484134 KRTAP20-2Q3LI61 65 aa4.35□□□□□ -1.71
RPUSD3-216ENST00000484134 KRTAP5-2Q701N4 177 aa4.33□□□□□ -1.72
RPUSD3-216ENST00000484134 LCE1EQ5T753 118 aa4.29□□□□□ -1.72
RPUSD3-216ENST00000484134 KRTAP5-10Q6L8G5 202 aa4.12□□□□□ -1.75
RPUSD3-216ENST00000484134 LCE1BQ5T7P3 118 aa4.03□□□□□ -1.76
RPUSD3-216ENST00000484134 KRTAP5-1Q6L8H4 278 aa3.99□□□□□ -1.77
RPUSD3-216ENST00000484134 KRTAP5-11Q6L8G4 156 aa3.92□□□□□ -1.78
RPUSD3-216ENST00000484134 AHNAK2Q8IVF2 5795 aa3.83□□□□□ -1.8
RPUSD3-216ENST00000484134 LCE1CQ5T751 118 aa3.76□□□□□ -1.81
RPUSD3-216ENST00000484134 KRTAP21-2Q3LI59 83 aa3.68□□□□□ -1.82
RPUSD3-216ENST00000484134 KRTAP5-8O75690 187 aa3.6□□□□□ -1.83
RPUSD3-216ENST00000484134 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.56□□□□□ -1.84
RPUSD3-216ENST00000484134 KRTAP21-1Q3LI58 79 aa3.52□□□□□ -1.85
RPUSD3-216ENST00000484134 KRTAP5-7Q6L8G8 165 aa3.46□□□□□ -1.86
RPUSD3-216ENST00000484134 KRTAP4-4Q9BYR3 166 aa3.44□□□□□ -1.86
RPUSD3-216ENST00000484134 MUC5BQ9HC84 5762 aaPredicted RBP3.43□□□□□ -1.86
RPUSD3-216ENST00000484134 MUC19Q7Z5P9 8384 aa3.42□□□□□ -1.86
RPUSD3-216ENST00000484134 GPR98Q8WXG9 6306 aa3.35□□□□□ -1.87
RPUSD3-216ENST00000484134 AHNAKQ09666 5890 aaKnown RBP2.78□□□□□ -1.96
RPUSD3-216ENST00000484134 PHGR1C9JFL3 82 aa2.77□□□□□ -1.97
RPUSD3-216ENST00000484134 MUC16Q8WXI7 14507 aa1.92□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 60.7 ms