RNA–Protein interactions for RNA: ENST00000483789.5

CCNL1-224, Transcript of cyclin L1, humanhuman

TSL 2

Gene CCNL1, Length 667 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-224ENST00000483789 RYR1P21817 5038 aa1.5□□□□□ -2.17
CCNL1-224ENST00000483789 KRTAP12-3P60328 96 aa1.49□□□□□ -2.17
CCNL1-224ENST00000483789 Q5VSD8 79 aa1.48□□□□□ -2.17
CCNL1-224ENST00000483789 HERC1Q15751 4861 aa1.47□□□□□ -2.17
CCNL1-224ENST00000483789 MUC17Q685J3 4493 aa1.44□□□□□ -2.18
CCNL1-224ENST00000483789 KRTAP19-2Q3LHN2 52 aa1.44□□□□□ -2.18
CCNL1-224ENST00000483789 TNP1P09430 55 aa1.43□□□□□ -2.18
CCNL1-224ENST00000483789 FLGP20930 4061 aaPredicted RBP1.43□□□□□ -2.18
CCNL1-224ENST00000483789 KMT2CQ8NEZ4 4911 aaKnown RBP1.43□□□□□ -2.18
CCNL1-224ENST00000483789 PCLOQ9Y6V0 5065 aa1.42□□□□□ -2.18
CCNL1-224ENST00000483789 LRP2P98164 4655 aa1.41□□□□□ -2.18
CCNL1-224ENST00000483789 RYR3Q15413 4870 aa1.41□□□□□ -2.18
CCNL1-224ENST00000483789 KRTAP6-3Q3LI67 103 aa1.4□□□□□ -2.19
CCNL1-224ENST00000483789 INE1O15225 51 aa1.39□□□□□ -2.19
CCNL1-224ENST00000483789 UBR4Q5T4S7 5183 aa1.38□□□□□ -2.19
CCNL1-224ENST00000483789 SPRR2GQ9BYE4 73 aa1.37□□□□□ -2.19
CCNL1-224ENST00000483789 LPAP08519 4548 aa1.36□□□□□ -2.19
CCNL1-224ENST00000483789 KIAA1109Q2LD37 5005 aa1.36□□□□□ -2.19
CCNL1-224ENST00000483789 KRTAP8-1Q8IUC2 63 aa1.35□□□□□ -2.19
CCNL1-224ENST00000483789 BIRC6Q9NR09 4857 aa1.35□□□□□ -2.19
CCNL1-224ENST00000483789 FCGBPQ9Y6R7 5405 aaPredicted RBP1.32□□□□□ -2.2
CCNL1-224ENST00000483789 KRTAP19-8Q3LI54 63 aa1.32□□□□□ -2.2
CCNL1-224ENST00000483789 ABCA13Q86UQ4 5058 aa1.31□□□□□ -2.2
CCNL1-224ENST00000483789 EPPK1P58107 5090 aaKnown RBP1.29□□□□□ -2.2
CCNL1-224ENST00000483789 HERC2O95714 4834 aa1.28□□□□□ -2.2
CCNL1-224ENST00000483789 MT2AP02795 61 aa1.25□□□□□ -2.21
CCNL1-224ENST00000483789 MT1BP07438 61 aa1.24□□□□□ -2.21
CCNL1-224ENST00000483789 MT1HP80294 61 aa1.24□□□□□ -2.21
CCNL1-224ENST00000483789 MT1XP80297 61 aa1.24□□□□□ -2.21
CCNL1-224ENST00000483789 HMCN2Q8NDA2 5059 aa1.23□□□□□ -2.21
CCNL1-224ENST00000483789 MT1FP04733 61 aa1.23□□□□□ -2.21
CCNL1-224ENST00000483789 KRTAP2-3P0C7H8 128 aa1.2□□□□□ -2.22
CCNL1-224ENST00000483789 KRTAP2-4Q9BYR9 128 aa1.2□□□□□ -2.22
CCNL1-224ENST00000483789 KRTAP2-1Q9BYU5 128 aa1.2□□□□□ -2.22
CCNL1-224ENST00000483789 MUC2Q02817 5179 aa1.19□□□□□ -2.22
CCNL1-224ENST00000483789 M0R2T5 61 aa1.19□□□□□ -2.22
CCNL1-224ENST00000483789 RNF213Q63HN8 5207 aa1.18□□□□□ -2.22
CCNL1-224ENST00000483789 FAT4Q6V0I7 4981 aa1.17□□□□□ -2.22
CCNL1-224ENST00000483789 KRTAP19-5Q3LI72 72 aa1.15□□□□□ -2.23
CCNL1-224ENST00000483789 KRTAP19-7Q3SYF9 63 aa1.11□□□□□ -2.23
CCNL1-224ENST00000483789 MT1EP04732 61 aa1.1□□□□□ -2.23
CCNL1-224ENST00000483789 MT1LQ93083 61 aa1.09□□□□□ -2.23
CCNL1-224ENST00000483789 MT1GP13640 62 aa1.03□□□□□ -2.24
CCNL1-224ENST00000483789 MT1AP04731 61 aa1.02□□□□□ -2.25
CCNL1-224ENST00000483789 KRTAP19-6Q3LI70 58 aa1.02□□□□□ -2.25
CCNL1-224ENST00000483789 FSIP2Q5CZC0 6907 aa1.02□□□□□ -2.25
CCNL1-224ENST00000483789 USH2AO75445 5202 aa1.02□□□□□ -2.25
CCNL1-224ENST00000483789 KRTAP19-3Q7Z4W3 81 aa1□□□□□ -2.25
CCNL1-224ENST00000483789 MT1MQ8N339 61 aa1□□□□□ -2.25
CCNL1-224ENST00000483789 SSPOA2VEC9 5147 aa0.99□□□□□ -2.25
CCNL1-224ENST00000483789 GPR98Q8WXG9 6306 aa0.98□□□□□ -2.25
CCNL1-224ENST00000483789 KMT2DO14686 5537 aa0.96□□□□□ -2.26
CCNL1-224ENST00000483789 NEBP20929 6669 aa0.95□□□□□ -2.26
CCNL1-224ENST00000483789 KRTAP5-10Q6L8G5 202 aa0.94□□□□□ -2.26
CCNL1-224ENST00000483789 SYNE1Q8NF91 8797 aaKnown RBP0.94□□□□□ -2.26
CCNL1-224ENST00000483789 SPRR2FQ96RM1 72 aa0.91□□□□□ -2.26
CCNL1-224ENST00000483789 SYNE2Q8WXH0 6885 aaKnown RBP0.91□□□□□ -2.26
CCNL1-224ENST00000483789 PRM1P04553 51 aa0.89□□□□□ -2.27
CCNL1-224ENST00000483789 KRTAP6-1Q3LI64 71 aa0.89□□□□□ -2.27
CCNL1-224ENST00000483789 AHNAK2Q8IVF2 5795 aa0.87□□□□□ -2.27
CCNL1-224ENST00000483789 MUC16Q8WXI7 14507 aa0.87□□□□□ -2.27
CCNL1-224ENST00000483789 SPRR2AP35326 72 aa0.87□□□□□ -2.27
CCNL1-224ENST00000483789 MACF1Q9UPN3 7388 aaKnown RBP0.85□□□□□ -2.27
CCNL1-224ENST00000483789 KRTAP6-2Q3LI66 62 aa0.85□□□□□ -2.27
CCNL1-224ENST00000483789 MUC12Q9UKN1 5478 aa0.85□□□□□ -2.27
CCNL1-224ENST00000483789 SPRR2EP22531 72 aa0.83□□□□□ -2.28
CCNL1-224ENST00000483789 SPRR2BP35325 72 aa0.82□□□□□ -2.28
CCNL1-224ENST00000483789 KRTAP20-1Q3LI63 56 aa0.81□□□□□ -2.28
CCNL1-224ENST00000483789 DSTQ03001 7570 aaKnown RBP0.79□□□□□ -2.28
CCNL1-224ENST00000483789 MUC5BQ9HC84 5762 aaPredicted RBP0.78□□□□□ -2.28
CCNL1-224ENST00000483789 MDN1Q9NU22 5596 aa0.78□□□□□ -2.28
CCNL1-224ENST00000483789 AHNAKQ09666 5890 aaKnown RBP0.78□□□□□ -2.29
CCNL1-224ENST00000483789 SPRR2DP22532 72 aa0.77□□□□□ -2.29
CCNL1-224ENST00000483789 MUC5ACP98088 5654 aa0.69□□□□□ -2.3
CCNL1-224ENST00000483789 KRTAP20-2Q3LI61 65 aa0.68□□□□□ -2.3
CCNL1-224ENST00000483789 KRTAP21-1Q3LI58 79 aa0.63□□□□□ -2.31
CCNL1-224ENST00000483789 MT4P47944 62 aa0.59□□□□□ -2.31
CCNL1-224ENST00000483789 PHGR1C9JFL3 82 aa0.47□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 10.3 ms