RNA–Protein interactions for RNA: ENST00000483415.5

EWSR1-217, Transcript of EWS RNA binding protein 1, humanhuman

TSL 1 (best)

Gene EWSR1, Length 3,231 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-217ENST00000483415 KRTAP4-8A0A0G2JLE6 195 aa3.89□□□□□ -1.79
EWSR1-217ENST00000483415 MT1EP04732 61 aa3.89□□□□□ -1.79
EWSR1-217ENST00000483415 KRTAP19-5Q3LI72 72 aa3.88□□□□□ -1.79
EWSR1-217ENST00000483415 LCE1AQ5T7P2 110 aa3.84□□□□□ -1.79
EWSR1-217ENST00000483415 KRTAP2-3P0C7H8 128 aa3.83□□□□□ -1.8
EWSR1-217ENST00000483415 LCE3BQ5TA77 95 aa3.83□□□□□ -1.8
EWSR1-217ENST00000483415 KRTAP2-4Q9BYR9 128 aa3.83□□□□□ -1.8
EWSR1-217ENST00000483415 KRTAP2-1Q9BYU5 128 aa3.83□□□□□ -1.8
EWSR1-217ENST00000483415 LCE3CQ5T5A8 94 aa3.82□□□□□ -1.8
EWSR1-217ENST00000483415 KRTAP4-12Q9BQ66 201 aa3.82□□□□□ -1.8
EWSR1-217ENST00000483415 KRTAP9-6A8MVA2 160 aa3.8□□□□□ -1.8
EWSR1-217ENST00000483415 FSIP2Q5CZC0 6907 aa3.79□□□□□ -1.8
EWSR1-217ENST00000483415 MT1LQ93083 61 aa3.79□□□□□ -1.8
EWSR1-217ENST00000483415 MT1GP13640 62 aa3.78□□□□□ -1.8
EWSR1-217ENST00000483415 KRTAP19-3Q7Z4W3 81 aa3.78□□□□□ -1.8
EWSR1-217ENST00000483415 SPRR2FQ96RM1 72 aa3.78□□□□□ -1.8
EWSR1-217ENST00000483415 LCE4AQ5TA78 99 aa3.76□□□□□ -1.81
EWSR1-217ENST00000483415 KRTAP9-9Q9BYP9 154 aa3.76□□□□□ -1.81
EWSR1-217ENST00000483415 KRTAP9-4Q9BYQ2 154 aa3.76□□□□□ -1.81
EWSR1-217ENST00000483415 MACF1Q9UPN3 7388 aaKnown RBP3.75□□□□□ -1.81
EWSR1-217ENST00000483415 LCE5AQ5TCM9 118 aa3.75□□□□□ -1.81
EWSR1-217ENST00000483415 SPRR2EP22531 72 aa3.67□□□□□ -1.82
EWSR1-217ENST00000483415 SPRR2BP35325 72 aa3.67□□□□□ -1.82
EWSR1-217ENST00000483415 SPRR2AP35326 72 aa3.67□□□□□ -1.82
EWSR1-217ENST00000483415 OBSCNQ5VST9 7968 aa3.67□□□□□ -1.82
EWSR1-217ENST00000483415 MT1MQ8N339 61 aa3.66□□□□□ -1.82
EWSR1-217ENST00000483415 KMT2DO14686 5537 aa3.59□□□□□ -1.83
EWSR1-217ENST00000483415 SPRR2DP22532 72 aa3.57□□□□□ -1.84
EWSR1-217ENST00000483415 NEBP20929 6669 aa3.56□□□□□ -1.84
EWSR1-217ENST00000483415 SYNE2Q8WXH0 6885 aaKnown RBP3.53□□□□□ -1.84
EWSR1-217ENST00000483415 KRTAP4-7Q9BYR0 210 aa3.53□□□□□ -1.84
EWSR1-217ENST00000483415 LCE1DQ5T752 114 aa3.51□□□□□ -1.85
EWSR1-217ENST00000483415 KRTAP20-1Q3LI63 56 aa3.46□□□□□ -1.86
EWSR1-217ENST00000483415 KRTAP12-4P60329 112 aa3.42□□□□□ -1.86
EWSR1-217ENST00000483415 KRTAP2-2Q9BYT5 123 aa3.42□□□□□ -1.86
EWSR1-217ENST00000483415 MUC12Q9UKN1 5478 aa3.41□□□□□ -1.86
EWSR1-217ENST00000483415 KRTAP5-5Q701N2 237 aaPredicted RBP3.4□□□□□ -1.86
EWSR1-217ENST00000483415 DSTQ03001 7570 aaKnown RBP3.39□□□□□ -1.87
EWSR1-217ENST00000483415 KRTAP4-9Q9BYQ8 210 aa3.38□□□□□ -1.87
EWSR1-217ENST00000483415 GPR98Q8WXG9 6306 aa3.37□□□□□ -1.87
EWSR1-217ENST00000483415 KRTAP5-4Q6L8H1 288 aa3.36□□□□□ -1.87
EWSR1-217ENST00000483415 KRTAP4-3Q9BYR4 195 aa3.36□□□□□ -1.87
EWSR1-217ENST00000483415 KRTAP4-2Q9BYR5 136 aa3.36□□□□□ -1.87
EWSR1-217ENST00000483415 MDN1Q9NU22 5596 aa3.35□□□□□ -1.87
EWSR1-217ENST00000483415 SYNE1Q8NF91 8797 aaKnown RBP3.33□□□□□ -1.88
EWSR1-217ENST00000483415 KRTAP4-11Q9BYQ6 195 aa3.31□□□□□ -1.88
EWSR1-217ENST00000483415 MT1AP04731 61 aa3.29□□□□□ -1.88
EWSR1-217ENST00000483415 KRTAP5-3Q6L8H2 238 aa3.29□□□□□ -1.88
EWSR1-217ENST00000483415 KRTAP6-1Q3LI64 71 aa3.11□□□□□ -1.91
EWSR1-217ENST00000483415 PRM1P04553 51 aa3.09□□□□□ -1.91
EWSR1-217ENST00000483415 KRTAP20-2Q3LI61 65 aa3.04□□□□□ -1.92
EWSR1-217ENST00000483415 KRTAP5-2Q701N4 177 aa3.04□□□□□ -1.92
EWSR1-217ENST00000483415 LCE3EQ5T5B0 92 aa2.99□□□□□ -1.93
EWSR1-217ENST00000483415 LCE3DQ9BYE3 92 aa2.98□□□□□ -1.93
EWSR1-217ENST00000483415 MT3P25713 68 aa2.98□□□□□ -1.93
EWSR1-217ENST00000483415 KRTAP5-7Q6L8G8 165 aa2.97□□□□□ -1.93
EWSR1-217ENST00000483415 MT4P47944 62 aa2.95□□□□□ -1.94
EWSR1-217ENST00000483415 MUC5BQ9HC84 5762 aaPredicted RBP2.93□□□□□ -1.94
EWSR1-217ENST00000483415 KRTAP6-2Q3LI66 62 aa2.87□□□□□ -1.95
EWSR1-217ENST00000483415 KRTAP5-10Q6L8G5 202 aa2.85□□□□□ -1.95
EWSR1-217ENST00000483415 AHNAK2Q8IVF2 5795 aa2.85□□□□□ -1.95
EWSR1-217ENST00000483415 AHNAKQ09666 5890 aaKnown RBP2.85□□□□□ -1.95
EWSR1-217ENST00000483415 HMCN1Q96RW7 5635 aa2.82□□□□□ -1.96
EWSR1-217ENST00000483415 LCE1EQ5T753 118 aa2.78□□□□□ -1.97
EWSR1-217ENST00000483415 KRTAP5-8O75690 187 aa2.64□□□□□ -1.99
EWSR1-217ENST00000483415 KRTAP5-1Q6L8H4 278 aa2.56□□□□□ -2
EWSR1-217ENST00000483415 MUC19Q7Z5P9 8384 aa2.5□□□□□ -2.01
EWSR1-217ENST00000483415 LCE1CQ5T751 118 aa2.5□□□□□ -2.01
EWSR1-217ENST00000483415 LCE1BQ5T7P3 118 aa2.5□□□□□ -2.01
EWSR1-217ENST00000483415 MUC5ACP98088 5654 aa2.47□□□□□ -2.01
EWSR1-217ENST00000483415 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.42□□□□□ -2.02
EWSR1-217ENST00000483415 KRTAP5-11Q6L8G4 156 aa2.3□□□□□ -2.04
EWSR1-217ENST00000483415 LCE1FQ5T754 118 aa2.29□□□□□ -2.04
EWSR1-217ENST00000483415 KRTAP21-2Q3LI59 83 aa2.1□□□□□ -2.07
EWSR1-217ENST00000483415 KRTAP21-1Q3LI58 79 aa2.05□□□□□ -2.08
EWSR1-217ENST00000483415 KRTAP4-4Q9BYR3 166 aa1.88□□□□□ -2.11
EWSR1-217ENST00000483415 PHGR1C9JFL3 82 aa1.88□□□□□ -2.11
EWSR1-217ENST00000483415 MUC16Q8WXI7 14507 aa1.28□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 76.7 ms