RNA–Protein interactions for RNA: ENST00000483311.5

ATXN2-210, Transcript of ataxin 2, humanhuman

TSL 1 (best)

Gene ATXN2, Length 4,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-210ENST00000483311 KRTAP19-4Q3LI73 84 aa4.07□□□□□ -1.76
ATXN2-210ENST00000483311 MT1EP04732 61 aa4.05□□□□□ -1.76
ATXN2-210ENST00000483311 SYNE2Q8WXH0 6885 aaKnown RBP4.04□□□□□ -1.76
ATXN2-210ENST00000483311 MT1LQ93083 61 aa4.03□□□□□ -1.76
ATXN2-210ENST00000483311 KRTAP9-6A0A140TA67 174 aa4.02□□□□□ -1.77
ATXN2-210ENST00000483311 KMT2DO14686 5537 aa4.01□□□□□ -1.77
ATXN2-210ENST00000483311 MT1GP13640 62 aa4□□□□□ -1.77
ATXN2-210ENST00000483311 KRTAP19-7Q3SYF9 63 aa4□□□□□ -1.77
ATXN2-210ENST00000483311 LCE2DQ5TA82 110 aaPredicted RBP4□□□□□ -1.77
ATXN2-210ENST00000483311 FCGBPQ9Y6R7 5405 aaPredicted RBP3.98□□□□□ -1.77
ATXN2-210ENST00000483311 SPRR2DP22532 72 aa3.96□□□□□ -1.78
ATXN2-210ENST00000483311 KRTAP19-3Q7Z4W3 81 aa3.96□□□□□ -1.78
ATXN2-210ENST00000483311 KRTAP4-3Q9BYR4 195 aa3.88□□□□□ -1.79
ATXN2-210ENST00000483311 MT1MQ8N339 61 aa3.86□□□□□ -1.79
ATXN2-210ENST00000483311 SSPOA2VEC9 5147 aa3.85□□□□□ -1.79
ATXN2-210ENST00000483311 LCE3BQ5TA77 95 aa3.81□□□□□ -1.8
ATXN2-210ENST00000483311 LOC100996750A0A140TA64 210 aa3.81□□□□□ -1.8
ATXN2-210ENST00000483311 MACF1Q9UPN3 7388 aaKnown RBP3.8□□□□□ -1.8
ATXN2-210ENST00000483311 MUC12Q9UKN1 5478 aa3.8□□□□□ -1.8
ATXN2-210ENST00000483311 KRTAP9-7A8MTY7 169 aa3.77□□□□□ -1.81
ATXN2-210ENST00000483311 KRTAP9-6A8MVA2 160 aa3.73□□□□□ -1.81
ATXN2-210ENST00000483311 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.7□□□□□ -1.82
ATXN2-210ENST00000483311 KRTAP12-4P60329 112 aa3.67□□□□□ -1.82
ATXN2-210ENST00000483311 MT4P47944 62 aa3.64□□□□□ -1.83
ATXN2-210ENST00000483311 LCE5AQ5TCM9 118 aa3.61□□□□□ -1.83
ATXN2-210ENST00000483311 LCE1AQ5T7P2 110 aa3.55□□□□□ -1.84
ATXN2-210ENST00000483311 KRTAP2-3P0C7H8 128 aa3.55□□□□□ -1.84
ATXN2-210ENST00000483311 KRTAP2-4Q9BYR9 128 aa3.55□□□□□ -1.84
ATXN2-210ENST00000483311 KRTAP2-1Q9BYU5 128 aa3.55□□□□□ -1.84
ATXN2-210ENST00000483311 MDN1Q9NU22 5596 aa3.54□□□□□ -1.84
ATXN2-210ENST00000483311 KRTAP6-3Q3LI67 103 aa3.52□□□□□ -1.85
ATXN2-210ENST00000483311 LCE3DQ9BYE3 92 aa3.5□□□□□ -1.85
ATXN2-210ENST00000483311 MT1AP04731 61 aa3.48□□□□□ -1.85
ATXN2-210ENST00000483311 KRTAP4-9Q9BYQ8 210 aa3.43□□□□□ -1.86
ATXN2-210ENST00000483311 KRTAP20-1Q3LI63 56 aa3.43□□□□□ -1.86
ATXN2-210ENST00000483311 LCE3EQ5T5B0 92 aa3.43□□□□□ -1.86
ATXN2-210ENST00000483311 KRTAP6-1Q3LI64 71 aa3.42□□□□□ -1.86
ATXN2-210ENST00000483311 MT3P25713 68 aa3.37□□□□□ -1.87
ATXN2-210ENST00000483311 KRTAP5-9P26371 169 aa3.37□□□□□ -1.87
ATXN2-210ENST00000483311 NEBP20929 6669 aa3.31□□□□□ -1.88
ATXN2-210ENST00000483311 MUC19Q7Z5P9 8384 aa3.26□□□□□ -1.89
ATXN2-210ENST00000483311 LCE1DQ5T752 114 aa3.25□□□□□ -1.89
ATXN2-210ENST00000483311 KRTAP2-2Q9BYT5 123 aa3.25□□□□□ -1.89
ATXN2-210ENST00000483311 KRTAP6-2Q3LI66 62 aa3.23□□□□□ -1.89
ATXN2-210ENST00000483311 KRTAP9-4Q9BYQ2 154 aa3.23□□□□□ -1.89
ATXN2-210ENST00000483311 LCE1BQ5T7P3 118 aa3.22□□□□□ -1.89
ATXN2-210ENST00000483311 PRM1P04553 51 aa3.14□□□□□ -1.91
ATXN2-210ENST00000483311 LCE4AQ5TA78 99 aa3.1□□□□□ -1.91
ATXN2-210ENST00000483311 GPR98Q8WXG9 6306 aa3.06□□□□□ -1.92
ATXN2-210ENST00000483311 KRTAP4-6Q9BYQ5 205 aa3.04□□□□□ -1.92
ATXN2-210ENST00000483311 KRTAP5-5Q701N2 237 aaPredicted RBP2.97□□□□□ -1.93
ATXN2-210ENST00000483311 KRTAP20-2Q3LI61 65 aa2.89□□□□□ -1.95
ATXN2-210ENST00000483311 MUC5ACP98088 5654 aa2.8□□□□□ -1.96
ATXN2-210ENST00000483311 KRTAP5-4Q6L8H1 288 aa2.76□□□□□ -1.97
ATXN2-210ENST00000483311 HMCN1Q96RW7 5635 aa2.7□□□□□ -1.98
ATXN2-210ENST00000483311 LCE1CQ5T751 118 aa2.66□□□□□ -1.98
ATXN2-210ENST00000483311 LCE1EQ5T753 118 aa2.66□□□□□ -1.98
ATXN2-210ENST00000483311 LCE1FQ5T754 118 aa2.66□□□□□ -1.98
ATXN2-210ENST00000483311 KRTAP9-9Q9BYP9 154 aa2.61□□□□□ -1.99
ATXN2-210ENST00000483311 KRTAP4-11Q9BYQ6 195 aa2.58□□□□□ -2
ATXN2-210ENST00000483311 AHNAK2Q8IVF2 5795 aa2.52□□□□□ -2.01
ATXN2-210ENST00000483311 KRTAP5-3Q6L8H2 238 aa2.51□□□□□ -2.01
ATXN2-210ENST00000483311 KRTAP4-12Q9BQ66 201 aa2.5□□□□□ -2.01
ATXN2-210ENST00000483311 KRTAP4-2Q9BYR5 136 aa2.5□□□□□ -2.01
ATXN2-210ENST00000483311 KRTAP5-2Q701N4 177 aa2.49□□□□□ -2.01
ATXN2-210ENST00000483311 KRTAP4-4Q9BYR3 166 aa2.42□□□□□ -2.02
ATXN2-210ENST00000483311 KRTAP5-8O75690 187 aa2.31□□□□□ -2.04
ATXN2-210ENST00000483311 MUC5BQ9HC84 5762 aaPredicted RBP2.25□□□□□ -2.05
ATXN2-210ENST00000483311 KRTAP5-1Q6L8H4 278 aa2.19□□□□□ -2.06
ATXN2-210ENST00000483311 KRTAP5-10Q6L8G5 202 aa2.17□□□□□ -2.06
ATXN2-210ENST00000483311 AHNAKQ09666 5890 aaKnown RBP2.15□□□□□ -2.07
ATXN2-210ENST00000483311 KRTAP21-2Q3LI59 83 aa2□□□□□ -2.09
ATXN2-210ENST00000483311 KRTAP5-11Q6L8G4 156 aa1.97□□□□□ -2.09
ATXN2-210ENST00000483311 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.93□□□□□ -2.1
ATXN2-210ENST00000483311 KRTAP5-7Q6L8G8 165 aa1.92□□□□□ -2.1
ATXN2-210ENST00000483311 PHGR1C9JFL3 82 aa1.8□□□□□ -2.12
ATXN2-210ENST00000483311 KRTAP21-1Q3LI58 79 aa1.58□□□□□ -2.16
ATXN2-210ENST00000483311 MUC16Q8WXI7 14507 aa1.15□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 9.4 ms