RNA–Protein interactions for RNA: ENST00000482873.6

DDR1-244, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 2,673 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-244ENST00000482873 KRTAP19-6Q3LI70 58 aa5.23□□□□□ -1.57
DDR1-244ENST00000482873 MT1LQ93083 61 aa5.23□□□□□ -1.57
DDR1-244ENST00000482873 DSTQ03001 7570 aaKnown RBP5.21□□□□□ -1.58
DDR1-244ENST00000482873 KRTAP4-3Q9BYR4 195 aa5.17□□□□□ -1.58
DDR1-244ENST00000482873 LCE2DQ5TA82 110 aaPredicted RBP5.12□□□□□ -1.59
DDR1-244ENST00000482873 LOC100996750A0A140TA64 210 aa5.11□□□□□ -1.59
DDR1-244ENST00000482873 MACF1Q9UPN3 7388 aaKnown RBP5.1□□□□□ -1.59
DDR1-244ENST00000482873 CRCT1Q9UGL9 99 aa5.06□□□□□ -1.6
DDR1-244ENST00000482873 SYNE2Q8WXH0 6885 aaKnown RBP5.03□□□□□ -1.6
DDR1-244ENST00000482873 KRTAP19-4Q3LI73 84 aa5.03□□□□□ -1.6
DDR1-244ENST00000482873 KRTAP9-2Q9BYQ4 174 aa5.03□□□□□ -1.6
DDR1-244ENST00000482873 MT1GP13640 62 aa5.02□□□□□ -1.61
DDR1-244ENST00000482873 MT1MQ8N339 61 aa4.91□□□□□ -1.62
DDR1-244ENST00000482873 KRTAP19-3Q7Z4W3 81 aa4.9□□□□□ -1.62
DDR1-244ENST00000482873 SPRR2FQ96RM1 72 aa4.9□□□□□ -1.62
DDR1-244ENST00000482873 MDN1Q9NU22 5596 aa4.89□□□□□ -1.63
DDR1-244ENST00000482873 SYNE1Q8NF91 8797 aaKnown RBP4.82□□□□□ -1.64
DDR1-244ENST00000482873 KRTAP12-4P60329 112 aa4.79□□□□□ -1.64
DDR1-244ENST00000482873 LCE5AQ5TCM9 118 aa4.73□□□□□ -1.65
DDR1-244ENST00000482873 LCE3BQ5TA77 95 aa4.64□□□□□ -1.67
DDR1-244ENST00000482873 KRTAP4-9Q9BYQ8 210 aa4.61□□□□□ -1.67
DDR1-244ENST00000482873 OBSCNQ5VST9 7968 aa4.6□□□□□ -1.67
DDR1-244ENST00000482873 LCE1AQ5T7P2 110 aa4.55□□□□□ -1.68
DDR1-244ENST00000482873 KRTAP2-2Q9BYT5 123 aa4.52□□□□□ -1.69
DDR1-244ENST00000482873 SPRR2EP22531 72 aa4.51□□□□□ -1.69
DDR1-244ENST00000482873 KRTAP5-9P26371 169 aa4.51□□□□□ -1.69
DDR1-244ENST00000482873 SPRR2BP35325 72 aa4.51□□□□□ -1.69
DDR1-244ENST00000482873 SPRR2AP35326 72 aa4.51□□□□□ -1.69
DDR1-244ENST00000482873 KRTAP6-1Q3LI64 71 aa4.51□□□□□ -1.69
DDR1-244ENST00000482873 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.48□□□□□ -1.69
DDR1-244ENST00000482873 KRTAP9-6A0A140TA67 174 aa4.46□□□□□ -1.7
DDR1-244ENST00000482873 KRTAP6-3Q3LI67 103 aa4.45□□□□□ -1.7
DDR1-244ENST00000482873 MT1AP04731 61 aa4.39□□□□□ -1.71
DDR1-244ENST00000482873 LCE3DQ9BYE3 92 aa4.33□□□□□ -1.72
DDR1-244ENST00000482873 KRTAP9-7A8MTY7 169 aa4.32□□□□□ -1.72
DDR1-244ENST00000482873 SPRR2DP22532 72 aa4.3□□□□□ -1.72
DDR1-244ENST00000482873 KRTAP5-5Q701N2 237 aaPredicted RBP4.3□□□□□ -1.72
DDR1-244ENST00000482873 LCE3EQ5T5B0 92 aa4.29□□□□□ -1.72
DDR1-244ENST00000482873 PRM1P04553 51 aa4.27□□□□□ -1.73
DDR1-244ENST00000482873 NEBP20929 6669 aa4.13□□□□□ -1.75
DDR1-244ENST00000482873 KRTAP9-4Q9BYQ2 154 aa4.1□□□□□ -1.75
DDR1-244ENST00000482873 KRTAP6-2Q3LI66 62 aa4.07□□□□□ -1.76
DDR1-244ENST00000482873 LCE1EQ5T753 118 aa4.05□□□□□ -1.76
DDR1-244ENST00000482873 MT3P25713 68 aa3.91□□□□□ -1.78
DDR1-244ENST00000482873 LCE1DQ5T752 114 aa3.91□□□□□ -1.78
DDR1-244ENST00000482873 MT4P47944 62 aa3.9□□□□□ -1.78
DDR1-244ENST00000482873 KRTAP4-6Q9BYQ5 205 aa3.88□□□□□ -1.79
DDR1-244ENST00000482873 KRTAP5-4Q6L8H1 288 aa3.81□□□□□ -1.8
DDR1-244ENST00000482873 HMCN1Q96RW7 5635 aa3.77□□□□□ -1.81
DDR1-244ENST00000482873 LCE1FQ5T754 118 aa3.71□□□□□ -1.82
DDR1-244ENST00000482873 KRTAP20-2Q3LI61 65 aa3.66□□□□□ -1.82
DDR1-244ENST00000482873 KRTAP20-1Q3LI63 56 aa3.63□□□□□ -1.83
DDR1-244ENST00000482873 LCE4AQ5TA78 99 aa3.62□□□□□ -1.83
DDR1-244ENST00000482873 KRTAP5-2Q701N4 177 aa3.49□□□□□ -1.85
DDR1-244ENST00000482873 KRTAP5-3Q6L8H2 238 aa3.47□□□□□ -1.85
DDR1-244ENST00000482873 MUC5ACP98088 5654 aa3.42□□□□□ -1.86
DDR1-244ENST00000482873 LCE1BQ5T7P3 118 aa3.36□□□□□ -1.87
DDR1-244ENST00000482873 KRTAP4-11Q9BYQ6 195 aa3.21□□□□□ -1.9
DDR1-244ENST00000482873 KRTAP5-10Q6L8G5 202 aa3.15□□□□□ -1.91
DDR1-244ENST00000482873 AHNAK2Q8IVF2 5795 aa3.1□□□□□ -1.91
DDR1-244ENST00000482873 KRTAP5-1Q6L8H4 278 aa3.07□□□□□ -1.92
DDR1-244ENST00000482873 KRTAP9-9Q9BYP9 154 aa3.07□□□□□ -1.92
DDR1-244ENST00000482873 KRTAP4-2Q9BYR5 136 aa3.07□□□□□ -1.92
DDR1-244ENST00000482873 MUC19Q7Z5P9 8384 aa3.01□□□□□ -1.93
DDR1-244ENST00000482873 KRTAP5-8O75690 187 aa2.98□□□□□ -1.93
DDR1-244ENST00000482873 LCE1CQ5T751 118 aa2.97□□□□□ -1.93
DDR1-244ENST00000482873 GPR98Q8WXG9 6306 aa2.9□□□□□ -1.95
DDR1-244ENST00000482873 MUC5BQ9HC84 5762 aaPredicted RBP2.89□□□□□ -1.95
DDR1-244ENST00000482873 KRTAP21-2Q3LI59 83 aa2.86□□□□□ -1.95
DDR1-244ENST00000482873 KRTAP4-4Q9BYR3 166 aa2.84□□□□□ -1.96
DDR1-244ENST00000482873 KRTAP21-1Q3LI58 79 aa2.81□□□□□ -1.96
DDR1-244ENST00000482873 KRTAP5-7Q6L8G8 165 aa2.75□□□□□ -1.97
DDR1-244ENST00000482873 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.73□□□□□ -1.97
DDR1-244ENST00000482873 KRTAP4-12Q9BQ66 201 aa2.71□□□□□ -1.98
DDR1-244ENST00000482873 KRTAP5-11Q6L8G4 156 aa2.54□□□□□ -2
DDR1-244ENST00000482873 PHGR1C9JFL3 82 aa2.24□□□□□ -2.05
DDR1-244ENST00000482873 AHNAKQ09666 5890 aaKnown RBP2.23□□□□□ -2.05
DDR1-244ENST00000482873 MUC16Q8WXI7 14507 aa1.48□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 6.6 ms