RNA–Protein interactions for RNA: ENST00000482722.5

COL9A2-207, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 2,887 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-207ENST00000482722 DSTQ03001 7570 aaKnown RBP4.95□□□□□ -1.62
COL9A2-207ENST00000482722 KRTAP19-6Q3LI70 58 aa4.93□□□□□ -1.62
COL9A2-207ENST00000482722 MACF1Q9UPN3 7388 aaKnown RBP4.91□□□□□ -1.62
COL9A2-207ENST00000482722 SYNE2Q8WXH0 6885 aaKnown RBP4.88□□□□□ -1.63
COL9A2-207ENST00000482722 MT1LQ93083 61 aa4.83□□□□□ -1.64
COL9A2-207ENST00000482722 MT1EP04732 61 aa4.82□□□□□ -1.64
COL9A2-207ENST00000482722 KRTAP4-3Q9BYR4 195 aa4.77□□□□□ -1.65
COL9A2-207ENST00000482722 MDN1Q9NU22 5596 aa4.74□□□□□ -1.65
COL9A2-207ENST00000482722 LOC100996750A0A140TA64 210 aa4.73□□□□□ -1.65
COL9A2-207ENST00000482722 KRTAP9-2Q9BYQ4 174 aa4.71□□□□□ -1.65
COL9A2-207ENST00000482722 CRCT1Q9UGL9 99 aa4.69□□□□□ -1.66
COL9A2-207ENST00000482722 KRTAP19-4Q3LI73 84 aa4.67□□□□□ -1.66
COL9A2-207ENST00000482722 SPRR2FQ96RM1 72 aa4.65□□□□□ -1.67
COL9A2-207ENST00000482722 MT1GP13640 62 aa4.63□□□□□ -1.67
COL9A2-207ENST00000482722 OBSCNQ5VST9 7968 aa4.61□□□□□ -1.67
COL9A2-207ENST00000482722 SYNE1Q8NF91 8797 aaKnown RBP4.58□□□□□ -1.68
COL9A2-207ENST00000482722 KRTAP12-4P60329 112 aa4.58□□□□□ -1.68
COL9A2-207ENST00000482722 KRTAP19-3Q7Z4W3 81 aa4.53□□□□□ -1.68
COL9A2-207ENST00000482722 MT1MQ8N339 61 aa4.51□□□□□ -1.69
COL9A2-207ENST00000482722 LCE5AQ5TCM9 118 aa4.41□□□□□ -1.7
COL9A2-207ENST00000482722 KRTAP4-9Q9BYQ8 210 aa4.35□□□□□ -1.71
COL9A2-207ENST00000482722 LCE3BQ5TA77 95 aa4.34□□□□□ -1.71
COL9A2-207ENST00000482722 LCE1AQ5T7P2 110 aa4.3□□□□□ -1.72
COL9A2-207ENST00000482722 SPRR2EP22531 72 aa4.27□□□□□ -1.73
COL9A2-207ENST00000482722 SPRR2BP35325 72 aa4.27□□□□□ -1.73
COL9A2-207ENST00000482722 SPRR2AP35326 72 aa4.27□□□□□ -1.73
COL9A2-207ENST00000482722 KRTAP9-4Q9BYQ2 154 aa4.25□□□□□ -1.73
COL9A2-207ENST00000482722 KRTAP5-9P26371 169 aa4.24□□□□□ -1.73
COL9A2-207ENST00000482722 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.19□□□□□ -1.74
COL9A2-207ENST00000482722 KRTAP9-7A8MTY7 169 aa4.15□□□□□ -1.75
COL9A2-207ENST00000482722 KRTAP6-1Q3LI64 71 aa4.15□□□□□ -1.75
COL9A2-207ENST00000482722 KRTAP9-6A0A140TA67 174 aa4.14□□□□□ -1.75
COL9A2-207ENST00000482722 MT1AP04731 61 aa4.14□□□□□ -1.75
COL9A2-207ENST00000482722 PRM1P04553 51 aa4.12□□□□□ -1.75
COL9A2-207ENST00000482722 KRTAP5-5Q701N2 237 aaPredicted RBP4.1□□□□□ -1.75
COL9A2-207ENST00000482722 LCE3DQ9BYE3 92 aa4.1□□□□□ -1.75
COL9A2-207ENST00000482722 KRTAP9-9Q9BYP9 154 aa4.09□□□□□ -1.75
COL9A2-207ENST00000482722 LCE3EQ5T5B0 92 aa4.08□□□□□ -1.76
COL9A2-207ENST00000482722 SPRR2DP22532 72 aa4.07□□□□□ -1.76
COL9A2-207ENST00000482722 KRTAP6-3Q3LI67 103 aa4.01□□□□□ -1.77
COL9A2-207ENST00000482722 LCE4AQ5TA78 99 aa3.98□□□□□ -1.77
COL9A2-207ENST00000482722 NEBP20929 6669 aa3.91□□□□□ -1.78
COL9A2-207ENST00000482722 KRTAP6-2Q3LI66 62 aa3.87□□□□□ -1.79
COL9A2-207ENST00000482722 KRTAP2-2Q9BYT5 123 aa3.77□□□□□ -1.81
COL9A2-207ENST00000482722 LCE1FQ5T754 118 aa3.77□□□□□ -1.81
COL9A2-207ENST00000482722 MT4P47944 62 aa3.72□□□□□ -1.81
COL9A2-207ENST00000482722 MT3P25713 68 aa3.71□□□□□ -1.82
COL9A2-207ENST00000482722 KRTAP4-6Q9BYQ5 205 aa3.7□□□□□ -1.82
COL9A2-207ENST00000482722 HMCN1Q96RW7 5635 aa3.62□□□□□ -1.83
COL9A2-207ENST00000482722 KRTAP5-4Q6L8H1 288 aa3.58□□□□□ -1.84
COL9A2-207ENST00000482722 KRTAP4-12Q9BQ66 201 aa3.48□□□□□ -1.85
COL9A2-207ENST00000482722 LCE1DQ5T752 114 aa3.48□□□□□ -1.85
COL9A2-207ENST00000482722 LCE1EQ5T753 118 aa3.47□□□□□ -1.85
COL9A2-207ENST00000482722 KRTAP20-2Q3LI61 65 aa3.45□□□□□ -1.86
COL9A2-207ENST00000482722 KRTAP20-1Q3LI63 56 aa3.37□□□□□ -1.87
COL9A2-207ENST00000482722 KRTAP5-2Q701N4 177 aa3.28□□□□□ -1.88
COL9A2-207ENST00000482722 KRTAP5-3Q6L8H2 238 aa3.27□□□□□ -1.89
COL9A2-207ENST00000482722 MUC5ACP98088 5654 aa3.16□□□□□ -1.9
COL9A2-207ENST00000482722 LCE1BQ5T7P3 118 aa3.11□□□□□ -1.91
COL9A2-207ENST00000482722 KRTAP4-11Q9BYQ6 195 aa3.09□□□□□ -1.91
COL9A2-207ENST00000482722 MUC19Q7Z5P9 8384 aa3.01□□□□□ -1.93
COL9A2-207ENST00000482722 KRTAP5-10Q6L8G5 202 aa2.95□□□□□ -1.94
COL9A2-207ENST00000482722 AHNAK2Q8IVF2 5795 aa2.95□□□□□ -1.94
COL9A2-207ENST00000482722 KRTAP5-1Q6L8H4 278 aa2.91□□□□□ -1.94
COL9A2-207ENST00000482722 KRTAP4-2Q9BYR5 136 aa2.87□□□□□ -1.95
COL9A2-207ENST00000482722 MUC5BQ9HC84 5762 aaPredicted RBP2.83□□□□□ -1.96
COL9A2-207ENST00000482722 KRTAP5-8O75690 187 aa2.81□□□□□ -1.96
COL9A2-207ENST00000482722 LCE1CQ5T751 118 aa2.76□□□□□ -1.97
COL9A2-207ENST00000482722 GPR98Q8WXG9 6306 aa2.67□□□□□ -1.98
COL9A2-207ENST00000482722 KRTAP4-4Q9BYR3 166 aa2.64□□□□□ -1.99
COL9A2-207ENST00000482722 KRTAP21-2Q3LI59 83 aa2.62□□□□□ -1.99
COL9A2-207ENST00000482722 KRTAP21-1Q3LI58 79 aa2.59□□□□□ -1.99
COL9A2-207ENST00000482722 KRTAP5-7Q6L8G8 165 aa2.56□□□□□ -2
COL9A2-207ENST00000482722 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.52□□□□□ -2.01
COL9A2-207ENST00000482722 KRTAP5-11Q6L8G4 156 aa2.38□□□□□ -2.03
COL9A2-207ENST00000482722 AHNAKQ09666 5890 aaKnown RBP2.17□□□□□ -2.06
COL9A2-207ENST00000482722 PHGR1C9JFL3 82 aa2.1□□□□□ -2.07
COL9A2-207ENST00000482722 MUC16Q8WXI7 14507 aa1.38□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 110.3 ms