RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 MT1EP04732 61 aa3.81□□□□□ -1.8
SMPD4-218ENST00000482171 MT1LQ93083 61 aa3.81□□□□□ -1.8
SMPD4-218ENST00000482171 KRTAP19-6Q3LI70 58 aa3.8□□□□□ -1.8
SMPD4-218ENST00000482171 DSTQ03001 7570 aaKnown RBP3.79□□□□□ -1.8
SMPD4-218ENST00000482171 KMT2DO14686 5537 aa3.77□□□□□ -1.81
SMPD4-218ENST00000482171 KRTAP9-2Q9BYQ4 174 aa3.77□□□□□ -1.81
SMPD4-218ENST00000482171 KRTAP19-3Q7Z4W3 81 aa3.75□□□□□ -1.81
SMPD4-218ENST00000482171 LCE3BQ5TA77 95 aa3.75□□□□□ -1.81
SMPD4-218ENST00000482171 KRTAP19-7Q3SYF9 63 aa3.73□□□□□ -1.81
SMPD4-218ENST00000482171 KRTAP4-3Q9BYR4 195 aa3.73□□□□□ -1.81
SMPD4-218ENST00000482171 FCGBPQ9Y6R7 5405 aaPredicted RBP3.7□□□□□ -1.82
SMPD4-218ENST00000482171 SPRR2DP22532 72 aa3.69□□□□□ -1.82
SMPD4-218ENST00000482171 LOC100996750A0A140TA64 210 aa3.67□□□□□ -1.82
SMPD4-218ENST00000482171 MT1MQ8N339 61 aa3.65□□□□□ -1.83
SMPD4-218ENST00000482171 LCE2DQ5TA82 110 aaPredicted RBP3.64□□□□□ -1.83
SMPD4-218ENST00000482171 SYNE2Q8WXH0 6885 aaKnown RBP3.6□□□□□ -1.83
SMPD4-218ENST00000482171 SSPOA2VEC9 5147 aa3.56□□□□□ -1.84
SMPD4-218ENST00000482171 KRTAP9-6A8MVA2 160 aa3.54□□□□□ -1.84
SMPD4-218ENST00000482171 MUC12Q9UKN1 5478 aa3.54□□□□□ -1.84
SMPD4-218ENST00000482171 KRTAP2-3P0C7H8 128 aa3.51□□□□□ -1.85
SMPD4-218ENST00000482171 KRTAP2-4Q9BYR9 128 aa3.51□□□□□ -1.85
SMPD4-218ENST00000482171 KRTAP2-1Q9BYU5 128 aa3.51□□□□□ -1.85
SMPD4-218ENST00000482171 LCE3DQ9BYE3 92 aa3.51□□□□□ -1.85
SMPD4-218ENST00000482171 LCE3EQ5T5B0 92 aa3.46□□□□□ -1.86
SMPD4-218ENST00000482171 MACF1Q9UPN3 7388 aaKnown RBP3.43□□□□□ -1.86
SMPD4-218ENST00000482171 KRTAP9-6A0A140TA67 174 aa3.43□□□□□ -1.86
SMPD4-218ENST00000482171 KRTAP4-9Q9BYQ8 210 aa3.37□□□□□ -1.87
SMPD4-218ENST00000482171 PRM1P04553 51 aa3.37□□□□□ -1.87
SMPD4-218ENST00000482171 MT4P47944 62 aa3.36□□□□□ -1.87
SMPD4-218ENST00000482171 LCE5AQ5TCM9 118 aa3.35□□□□□ -1.87
SMPD4-218ENST00000482171 LCE1AQ5T7P2 110 aa3.32□□□□□ -1.88
SMPD4-218ENST00000482171 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.3□□□□□ -1.88
SMPD4-218ENST00000482171 MT1AP04731 61 aa3.28□□□□□ -1.88
SMPD4-218ENST00000482171 KRTAP9-7A8MTY7 169 aa3.26□□□□□ -1.89
SMPD4-218ENST00000482171 KRTAP6-1Q3LI64 71 aa3.25□□□□□ -1.89
SMPD4-218ENST00000482171 MT3P25713 68 aa3.24□□□□□ -1.89
SMPD4-218ENST00000482171 KRTAP6-3Q3LI67 103 aa3.23□□□□□ -1.89
SMPD4-218ENST00000482171 MDN1Q9NU22 5596 aa3.13□□□□□ -1.91
SMPD4-218ENST00000482171 KRTAP6-2Q3LI66 62 aa3.11□□□□□ -1.91
SMPD4-218ENST00000482171 LCE1DQ5T752 114 aa3.08□□□□□ -1.92
SMPD4-218ENST00000482171 KRTAP5-9P26371 169 aa3.05□□□□□ -1.92
SMPD4-218ENST00000482171 LCE1BQ5T7P3 118 aa3.05□□□□□ -1.92
SMPD4-218ENST00000482171 KRTAP9-4Q9BYQ2 154 aa3.04□□□□□ -1.92
SMPD4-218ENST00000482171 KRTAP20-1Q3LI63 56 aa3.02□□□□□ -1.93
SMPD4-218ENST00000482171 MUC19Q7Z5P9 8384 aa2.99□□□□□ -1.93
SMPD4-218ENST00000482171 KRTAP2-2Q9BYT5 123 aa2.94□□□□□ -1.94
SMPD4-218ENST00000482171 NEBP20929 6669 aa2.92□□□□□ -1.94
SMPD4-218ENST00000482171 LCE4AQ5TA78 99 aa2.9□□□□□ -1.95
SMPD4-218ENST00000482171 KRTAP4-6Q9BYQ5 205 aa2.86□□□□□ -1.95
SMPD4-218ENST00000482171 LCE1EQ5T753 118 aa2.71□□□□□ -1.98
SMPD4-218ENST00000482171 KRTAP20-2Q3LI61 65 aa2.7□□□□□ -1.98
SMPD4-218ENST00000482171 KRTAP5-5Q701N2 237 aaPredicted RBP2.7□□□□□ -1.98
SMPD4-218ENST00000482171 MUC5ACP98088 5654 aa2.55□□□□□ -2
SMPD4-218ENST00000482171 KRTAP4-11Q9BYQ6 195 aa2.54□□□□□ -2
SMPD4-218ENST00000482171 GPR98Q8WXG9 6306 aa2.51□□□□□ -2.01
SMPD4-218ENST00000482171 KRTAP5-4Q6L8H1 288 aa2.46□□□□□ -2.02
SMPD4-218ENST00000482171 HMCN1Q96RW7 5635 aa2.46□□□□□ -2.02
SMPD4-218ENST00000482171 LCE1CQ5T751 118 aa2.41□□□□□ -2.02
SMPD4-218ENST00000482171 LCE1FQ5T754 118 aa2.41□□□□□ -2.02
SMPD4-218ENST00000482171 KRTAP9-9Q9BYP9 154 aa2.37□□□□□ -2.03
SMPD4-218ENST00000482171 KRTAP4-4Q9BYR3 166 aa2.31□□□□□ -2.04
SMPD4-218ENST00000482171 KRTAP4-12Q9BQ66 201 aa2.3□□□□□ -2.04
SMPD4-218ENST00000482171 KRTAP4-2Q9BYR5 136 aa2.3□□□□□ -2.04
SMPD4-218ENST00000482171 KRTAP5-3Q6L8H2 238 aa2.26□□□□□ -2.05
SMPD4-218ENST00000482171 KRTAP5-2Q701N4 177 aa2.22□□□□□ -2.05
SMPD4-218ENST00000482171 AHNAK2Q8IVF2 5795 aa2.21□□□□□ -2.06
SMPD4-218ENST00000482171 KRTAP5-8O75690 187 aa2.11□□□□□ -2.07
SMPD4-218ENST00000482171 KRTAP5-10Q6L8G5 202 aa2.08□□□□□ -2.08
SMPD4-218ENST00000482171 MUC5BQ9HC84 5762 aaPredicted RBP1.99□□□□□ -2.09
SMPD4-218ENST00000482171 KRTAP5-1Q6L8H4 278 aa1.98□□□□□ -2.09
SMPD4-218ENST00000482171 AHNAKQ09666 5890 aaKnown RBP1.88□□□□□ -2.11
SMPD4-218ENST00000482171 KRTAP21-2Q3LI59 83 aa1.84□□□□□ -2.11
SMPD4-218ENST00000482171 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.8□□□□□ -2.12
SMPD4-218ENST00000482171 KRTAP5-11Q6L8G4 156 aa1.79□□□□□ -2.12
SMPD4-218ENST00000482171 KRTAP21-1Q3LI58 79 aa1.67□□□□□ -2.14
SMPD4-218ENST00000482171 KRTAP5-7Q6L8G8 165 aa1.65□□□□□ -2.15
SMPD4-218ENST00000482171 PHGR1C9JFL3 82 aa1.56□□□□□ -2.16
SMPD4-218ENST00000482171 MUC16Q8WXI7 14507 aa1.06□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 162.4 ms