RNA–Protein interactions for RNA: ENST00000481453.5

MRPL28-209, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 2

Gene MRPL28, Length 2,229 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-209ENST00000481453 KRTAP19-4Q3LI73 84 aa6.37□□□□□ -1.39
MRPL28-209ENST00000481453 CRCT1Q9UGL9 99 aa6.32□□□□□ -1.4
MRPL28-209ENST00000481453 KRTAP19-3Q7Z4W3 81 aa6.23□□□□□ -1.41
MRPL28-209ENST00000481453 MACF1Q9UPN3 7388 aaKnown RBP6.23□□□□□ -1.41
MRPL28-209ENST00000481453 SPRR2FQ96RM1 72 aa6.21□□□□□ -1.42
MRPL28-209ENST00000481453 MUC12Q9UKN1 5478 aa6.2□□□□□ -1.42
MRPL28-209ENST00000481453 MT1GP13640 62 aa6.17□□□□□ -1.42
MRPL28-209ENST00000481453 MT1MQ8N339 61 aa6.17□□□□□ -1.42
MRPL28-209ENST00000481453 KRTAP2-3P0C7H8 128 aa6.17□□□□□ -1.42
MRPL28-209ENST00000481453 KRTAP2-4Q9BYR9 128 aa6.17□□□□□ -1.42
MRPL28-209ENST00000481453 KRTAP2-1Q9BYU5 128 aa6.17□□□□□ -1.42
MRPL28-209ENST00000481453 KRTAP4-3Q9BYR4 195 aa6.14□□□□□ -1.43
MRPL28-209ENST00000481453 LCE5AQ5TCM9 118 aa6.11□□□□□ -1.43
MRPL28-209ENST00000481453 KRTAP5-9P26371 169 aa6.05□□□□□ -1.44
MRPL28-209ENST00000481453 SYNE2Q8WXH0 6885 aaKnown RBP5.99□□□□□ -1.45
MRPL28-209ENST00000481453 LOC100996750A0A140TA64 210 aa5.99□□□□□ -1.45
MRPL28-209ENST00000481453 LCE1AQ5T7P2 110 aa5.93□□□□□ -1.46
MRPL28-209ENST00000481453 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.86□□□□□ -1.47
MRPL28-209ENST00000481453 KRTAP9-6A0A140TA67 174 aa5.85□□□□□ -1.47
MRPL28-209ENST00000481453 MDN1Q9NU22 5596 aa5.82□□□□□ -1.48
MRPL28-209ENST00000481453 SPRR2EP22531 72 aa5.81□□□□□ -1.48
MRPL28-209ENST00000481453 SPRR2BP35325 72 aa5.81□□□□□ -1.48
MRPL28-209ENST00000481453 SPRR2AP35326 72 aa5.81□□□□□ -1.48
MRPL28-209ENST00000481453 KRTAP6-3Q3LI67 103 aa5.78□□□□□ -1.48
MRPL28-209ENST00000481453 DSTQ03001 7570 aaKnown RBP5.73□□□□□ -1.49
MRPL28-209ENST00000481453 SPRR2DP22532 72 aa5.58□□□□□ -1.52
MRPL28-209ENST00000481453 KRTAP5-5Q701N2 237 aaPredicted RBP5.55□□□□□ -1.52
MRPL28-209ENST00000481453 KRTAP6-1Q3LI64 71 aa5.48□□□□□ -1.53
MRPL28-209ENST00000481453 MT1AP04731 61 aa5.48□□□□□ -1.53
MRPL28-209ENST00000481453 KRTAP12-4P60329 112 aa5.47□□□□□ -1.53
MRPL28-209ENST00000481453 LCE3BQ5TA77 95 aa5.43□□□□□ -1.54
MRPL28-209ENST00000481453 KRTAP9-7A8MTY7 169 aa5.41□□□□□ -1.54
MRPL28-209ENST00000481453 NEBP20929 6669 aa5.31□□□□□ -1.56
MRPL28-209ENST00000481453 KRTAP4-9Q9BYQ8 210 aa5.29□□□□□ -1.56
MRPL28-209ENST00000481453 SYNE1Q8NF91 8797 aaKnown RBP5.24□□□□□ -1.57
MRPL28-209ENST00000481453 KRTAP9-4Q9BYQ2 154 aa5.19□□□□□ -1.58
MRPL28-209ENST00000481453 KRTAP5-4Q6L8H1 288 aa5.14□□□□□ -1.59
MRPL28-209ENST00000481453 LCE3DQ9BYE3 92 aa5.13□□□□□ -1.59
MRPL28-209ENST00000481453 LCE3EQ5T5B0 92 aa5.06□□□□□ -1.6
MRPL28-209ENST00000481453 KRTAP6-2Q3LI66 62 aa4.99□□□□□ -1.61
MRPL28-209ENST00000481453 MT3P25713 68 aa4.92□□□□□ -1.62
MRPL28-209ENST00000481453 LCE4AQ5TA78 99 aa4.91□□□□□ -1.62
MRPL28-209ENST00000481453 KRTAP4-6Q9BYQ5 205 aa4.91□□□□□ -1.62
MRPL28-209ENST00000481453 KRTAP2-2Q9BYT5 123 aa4.89□□□□□ -1.63
MRPL28-209ENST00000481453 MT4P47944 62 aa4.88□□□□□ -1.63
MRPL28-209ENST00000481453 PRM1P04553 51 aa4.82□□□□□ -1.64
MRPL28-209ENST00000481453 KRTAP20-1Q3LI63 56 aa4.8□□□□□ -1.64
MRPL28-209ENST00000481453 KRTAP20-2Q3LI61 65 aa4.8□□□□□ -1.64
MRPL28-209ENST00000481453 LCE1DQ5T752 114 aa4.74□□□□□ -1.65
MRPL28-209ENST00000481453 KRTAP5-2Q701N4 177 aa4.72□□□□□ -1.65
MRPL28-209ENST00000481453 HMCN1Q96RW7 5635 aa4.65□□□□□ -1.66
MRPL28-209ENST00000481453 KRTAP5-3Q6L8H2 238 aa4.62□□□□□ -1.67
MRPL28-209ENST00000481453 OBSCNQ5VST9 7968 aa4.59□□□□□ -1.68
MRPL28-209ENST00000481453 LCE1EQ5T753 118 aa4.19□□□□□ -1.74
MRPL28-209ENST00000481453 KRTAP4-11Q9BYQ6 195 aa4.07□□□□□ -1.76
MRPL28-209ENST00000481453 KRTAP5-1Q6L8H4 278 aa4.05□□□□□ -1.76
MRPL28-209ENST00000481453 MUC5ACP98088 5654 aa4.01□□□□□ -1.77
MRPL28-209ENST00000481453 KRTAP5-10Q6L8G5 202 aa4.01□□□□□ -1.77
MRPL28-209ENST00000481453 LCE1BQ5T7P3 118 aa3.99□□□□□ -1.77
MRPL28-209ENST00000481453 KRTAP4-2Q9BYR5 136 aa3.98□□□□□ -1.77
MRPL28-209ENST00000481453 AHNAK2Q8IVF2 5795 aa3.95□□□□□ -1.78
MRPL28-209ENST00000481453 KRTAP5-8O75690 187 aa3.94□□□□□ -1.78
MRPL28-209ENST00000481453 LCE1CQ5T751 118 aa3.93□□□□□ -1.78
MRPL28-209ENST00000481453 KRTAP5-7Q6L8G8 165 aa3.85□□□□□ -1.79
MRPL28-209ENST00000481453 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.71□□□□□ -1.82
MRPL28-209ENST00000481453 KRTAP21-2Q3LI59 83 aa3.59□□□□□ -1.84
MRPL28-209ENST00000481453 KRTAP5-11Q6L8G4 156 aa3.45□□□□□ -1.86
MRPL28-209ENST00000481453 GPR98Q8WXG9 6306 aa3.42□□□□□ -1.86
MRPL28-209ENST00000481453 KRTAP9-9Q9BYP9 154 aa3.42□□□□□ -1.86
MRPL28-209ENST00000481453 MUC5BQ9HC84 5762 aaPredicted RBP3.3□□□□□ -1.88
MRPL28-209ENST00000481453 LCE1FQ5T754 118 aa3.3□□□□□ -1.88
MRPL28-209ENST00000481453 KRTAP4-12Q9BQ66 201 aa3.24□□□□□ -1.89
MRPL28-209ENST00000481453 KRTAP4-4Q9BYR3 166 aa3.2□□□□□ -1.9
MRPL28-209ENST00000481453 KRTAP21-1Q3LI58 79 aa3.04□□□□□ -1.92
MRPL28-209ENST00000481453 PHGR1C9JFL3 82 aa2.97□□□□□ -1.93
MRPL28-209ENST00000481453 MUC19Q7Z5P9 8384 aa2.91□□□□□ -1.94
MRPL28-209ENST00000481453 AHNAKQ09666 5890 aaKnown RBP2.8□□□□□ -1.96
MRPL28-209ENST00000481453 MUC16Q8WXI7 14507 aa1.95□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 93.5 ms