RNA–Protein interactions for RNA: ENST00000481347.1

TPR-206, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 5

Gene TPR, Length 2,727 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-206ENST00000481347 KRTAP8-1Q8IUC2 63 aa4.12□□□□□ -1.75
TPR-206ENST00000481347 LOC100996750A0A140TA64 210 aa4.1□□□□□ -1.75
TPR-206ENST00000481347 KRTAP4-6Q9BYQ5 205 aa4.1□□□□□ -1.75
TPR-206ENST00000481347 KRTAP10-7P60409 375 aaPredicted RBP4.09□□□□□ -1.75
TPR-206ENST00000481347 KRTAP12-3P60328 96 aa4.05□□□□□ -1.76
TPR-206ENST00000481347 KRTAP19-5Q3LI72 72 aa3.92□□□□□ -1.78
TPR-206ENST00000481347 LCE1DQ5T752 114 aa3.91□□□□□ -1.78
TPR-206ENST00000481347 USH2AO75445 5202 aa3.89□□□□□ -1.79
TPR-206ENST00000481347 LCE3DQ9BYE3 92 aa3.87□□□□□ -1.79
TPR-206ENST00000481347 KRTAP4-8A0A0G2JLE6 195 aa3.86□□□□□ -1.79
TPR-206ENST00000481347 KMT2DO14686 5537 aa3.81□□□□□ -1.8
TPR-206ENST00000481347 KRTAP6-3Q3LI67 103 aa3.76□□□□□ -1.81
TPR-206ENST00000481347 KRTAP19-7Q3SYF9 63 aa3.74□□□□□ -1.81
TPR-206ENST00000481347 KRTAP2-3P0C7H8 128 aa3.71□□□□□ -1.82
TPR-206ENST00000481347 KRTAP2-4Q9BYR9 128 aa3.71□□□□□ -1.82
TPR-206ENST00000481347 KRTAP2-1Q9BYU5 128 aa3.71□□□□□ -1.82
TPR-206ENST00000481347 SSPOA2VEC9 5147 aa3.68□□□□□ -1.82
TPR-206ENST00000481347 KRTAP4-7Q9BYR0 210 aa3.67□□□□□ -1.82
TPR-206ENST00000481347 KRTAP4-11Q9BYQ6 195 aa3.66□□□□□ -1.82
TPR-206ENST00000481347 KRTAP9-6A8MVA2 160 aa3.66□□□□□ -1.82
TPR-206ENST00000481347 CRCT1Q9UGL9 99 aa3.65□□□□□ -1.82
TPR-206ENST00000481347 MT1EP04732 61 aa3.64□□□□□ -1.83
TPR-206ENST00000481347 KRTAP19-6Q3LI70 58 aa3.64□□□□□ -1.83
TPR-206ENST00000481347 MT1LQ93083 61 aa3.64□□□□□ -1.83
TPR-206ENST00000481347 KRTAP4-9Q9BYQ8 210 aa3.55□□□□□ -1.84
TPR-206ENST00000481347 KRTAP12-4P60329 112 aa3.54□□□□□ -1.84
TPR-206ENST00000481347 FSIP2Q5CZC0 6907 aa3.53□□□□□ -1.84
TPR-206ENST00000481347 KRTAP4-3Q9BYR4 195 aa3.46□□□□□ -1.86
TPR-206ENST00000481347 FCGBPQ9Y6R7 5405 aaPredicted RBP3.43□□□□□ -1.86
TPR-206ENST00000481347 KRTAP19-3Q7Z4W3 81 aa3.42□□□□□ -1.86
TPR-206ENST00000481347 MT1MQ8N339 61 aa3.42□□□□□ -1.86
TPR-206ENST00000481347 MT1GP13640 62 aa3.41□□□□□ -1.86
TPR-206ENST00000481347 MUC12Q9UKN1 5478 aa3.39□□□□□ -1.87
TPR-206ENST00000481347 KRTAP4-2Q9BYR5 136 aa3.35□□□□□ -1.87
TPR-206ENST00000481347 SPRR2FQ96RM1 72 aa3.35□□□□□ -1.87
TPR-206ENST00000481347 PRM1P04553 51 aa3.22□□□□□ -1.89
TPR-206ENST00000481347 MACF1Q9UPN3 7388 aaKnown RBP3.21□□□□□ -1.9
TPR-206ENST00000481347 DSTQ03001 7570 aaKnown RBP3.19□□□□□ -1.9
TPR-206ENST00000481347 SYNE1Q8NF91 8797 aaKnown RBP3.16□□□□□ -1.9
TPR-206ENST00000481347 KRTAP5-9P26371 169 aa3.14□□□□□ -1.91
TPR-206ENST00000481347 KRTAP6-1Q3LI64 71 aa3.09□□□□□ -1.92
TPR-206ENST00000481347 SYNE2Q8WXH0 6885 aaKnown RBP3.08□□□□□ -1.92
TPR-206ENST00000481347 MDN1Q9NU22 5596 aa3.07□□□□□ -1.92
TPR-206ENST00000481347 SPRR2EP22531 72 aa3.06□□□□□ -1.92
TPR-206ENST00000481347 SPRR2BP35325 72 aa3.06□□□□□ -1.92
TPR-206ENST00000481347 SPRR2AP35326 72 aa3.06□□□□□ -1.92
TPR-206ENST00000481347 KRTAP5-5Q701N2 237 aaPredicted RBP3.06□□□□□ -1.92
TPR-206ENST00000481347 MT1AP04731 61 aa3.06□□□□□ -1.92
TPR-206ENST00000481347 KRTAP20-1Q3LI63 56 aa3.02□□□□□ -1.93
TPR-206ENST00000481347 GPR98Q8WXG9 6306 aa3.02□□□□□ -1.93
TPR-206ENST00000481347 OBSCNQ5VST9 7968 aa3.02□□□□□ -1.93
TPR-206ENST00000481347 NEBP20929 6669 aa3.01□□□□□ -1.93
TPR-206ENST00000481347 SPRR2DP22532 72 aa2.93□□□□□ -1.94
TPR-206ENST00000481347 KRTAP5-3Q6L8H2 238 aa2.88□□□□□ -1.95
TPR-206ENST00000481347 KRTAP6-2Q3LI66 62 aa2.85□□□□□ -1.95
TPR-206ENST00000481347 MUC19Q7Z5P9 8384 aa2.83□□□□□ -1.96
TPR-206ENST00000481347 KRTAP5-4Q6L8H1 288 aa2.66□□□□□ -1.98
TPR-206ENST00000481347 HMCN1Q96RW7 5635 aa2.63□□□□□ -1.99
TPR-206ENST00000481347 KRTAP5-11Q6L8G4 156 aa2.62□□□□□ -1.99
TPR-206ENST00000481347 MT4P47944 62 aa2.6□□□□□ -1.99
TPR-206ENST00000481347 LCE1CQ5T751 118 aa2.57□□□□□ -2
TPR-206ENST00000481347 LCE1BQ5T7P3 118 aa2.57□□□□□ -2
TPR-206ENST00000481347 KRTAP20-2Q3LI61 65 aa2.52□□□□□ -2.01
TPR-206ENST00000481347 KRTAP5-2Q701N4 177 aa2.48□□□□□ -2.01
TPR-206ENST00000481347 AHNAK2Q8IVF2 5795 aa2.42□□□□□ -2.02
TPR-206ENST00000481347 KRTAP5-7Q6L8G8 165 aa2.41□□□□□ -2.02
TPR-206ENST00000481347 KRTAP5-10Q6L8G5 202 aa2.37□□□□□ -2.03
TPR-206ENST00000481347 KRTAP5-1Q6L8H4 278 aa2.35□□□□□ -2.03
TPR-206ENST00000481347 MUC5BQ9HC84 5762 aaPredicted RBP2.33□□□□□ -2.04
TPR-206ENST00000481347 AHNAKQ09666 5890 aaKnown RBP2.32□□□□□ -2.04
TPR-206ENST00000481347 MUC5ACP98088 5654 aa2.29□□□□□ -2.04
TPR-206ENST00000481347 KRTAP21-1Q3LI58 79 aa2.07□□□□□ -2.08
TPR-206ENST00000481347 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.07□□□□□ -2.08
TPR-206ENST00000481347 KRTAP5-8O75690 187 aa2.05□□□□□ -2.08
TPR-206ENST00000481347 KRTAP21-2Q3LI59 83 aa1.98□□□□□ -2.09
TPR-206ENST00000481347 KRTAP4-4Q9BYR3 166 aa1.85□□□□□ -2.11
TPR-206ENST00000481347 PHGR1C9JFL3 82 aa1.58□□□□□ -2.16
TPR-206ENST00000481347 MUC16Q8WXI7 14507 aa1.06□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 157.4 ms