RNA–Protein interactions for RNA: ENST00000481048.5

LRCH3-216, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 536 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-216ENST00000481048 TMEM258P61165 79 aa2.59□□□□□ -1.99
LRCH3-216ENST00000481048 OCR1Q9BZK8 76 aa2.59□□□□□ -1.99
LRCH3-216ENST00000481048 COX7CP15954 63 aa2.58□□□□□ -2
LRCH3-216ENST00000481048 DMAC1Q96GE9 116 aa2.58□□□□□ -2
LRCH3-216ENST00000481048 LINC01554Q52M75 96 aa2.56□□□□□ -2
LRCH3-216ENST00000481048 TRAV7A0A075B6U4 112 aa2.55□□□□□ -2
LRCH3-216ENST00000481048 SERP2Q8N6R1 65 aa2.55□□□□□ -2
LRCH3-216ENST00000481048 MUC19Q7Z5P9 8384 aa2.54□□□□□ -2
LRCH3-216ENST00000481048 ACYP2P14621 99 aa2.53□□□□□ -2
LRCH3-216ENST00000481048 KRTAP5-7Q6L8G8 165 aa2.53□□□□□ -2
LRCH3-216ENST00000481048 SPTSSBQ8NFR3 76 aa2.53□□□□□ -2
LRCH3-216ENST00000481048 ATP5EP56381 51 aaPredicted RBP2.52□□□□□ -2.01
LRCH3-216ENST00000481048 SERP1Q9Y6X1 66 aa2.51□□□□□ -2.01
LRCH3-216ENST00000481048 PRO0628Q9UI54 55 aa2.5□□□□□ -2.01
LRCH3-216ENST00000481048 DSTQ03001 7570 aaKnown RBP2.49□□□□□ -2.01
LRCH3-216ENST00000481048 SMIM26A0A096LP01 95 aa2.48□□□□□ -2.01
LRCH3-216ENST00000481048 CHKB-CPT1BH3BT56 60 aa2.45□□□□□ -2.02
LRCH3-216ENST00000481048 V9GYY9 64 aa2.45□□□□□ -2.02
LRCH3-216ENST00000481048 H7BZZ5 65 aa2.42□□□□□ -2.02
LRCH3-216ENST00000481048 CAMK2N1Q7Z7J9 78 aa2.42□□□□□ -2.02
LRCH3-216ENST00000481048 CYSTM1Q9H1C7 97 aa2.42□□□□□ -2.02
LRCH3-216ENST00000481048 KRTAP19-7Q3SYF9 63 aa2.41□□□□□ -2.02
LRCH3-216ENST00000481048 KRTAP19-3Q7Z4W3 81 aa2.41□□□□□ -2.02
LRCH3-216ENST00000481048 BRK1Q8WUW1 75 aa2.41□□□□□ -2.02
LRCH3-216ENST00000481048 MT1EP04732 61 aa2.39□□□□□ -2.03
LRCH3-216ENST00000481048 SEC61GP60059 68 aa2.39□□□□□ -2.03
LRCH3-216ENST00000481048 SPANXA2-OT1Q8N9U9 137 aa2.39□□□□□ -2.03
LRCH3-216ENST00000481048 KRTAP13-4Q3LI77 160 aa2.38□□□□□ -2.03
LRCH3-216ENST00000481048 SNURFQ9Y675 71 aa2.38□□□□□ -2.03
LRCH3-216ENST00000481048 MT1GP13640 62 aa2.37□□□□□ -2.03
LRCH3-216ENST00000481048 PMAIP1Q13794 54 aa2.36□□□□□ -2.03
LRCH3-216ENST00000481048 GPR98Q8WXG9 6306 aa2.35□□□□□ -2.03
LRCH3-216ENST00000481048 Q1T7F1 81 aa2.35□□□□□ -2.03
LRCH3-216ENST00000481048 A0A0D9SG42 100 aa2.34□□□□□ -2.03
LRCH3-216ENST00000481048 KRTAP19-5Q3LI72 72 aa2.3□□□□□ -2.04
LRCH3-216ENST00000481048 A0A1B0GU33 70 aa2.29□□□□□ -2.04
LRCH3-216ENST00000481048 SPINT4Q6UDR6 99 aa2.29□□□□□ -2.04
LRCH3-216ENST00000481048 KTN1-AS1Q86SY8 53 aa2.29□□□□□ -2.04
LRCH3-216ENST00000481048 COA5Q86WW8 74 aa2.29□□□□□ -2.04
LRCH3-216ENST00000481048 SPATA8Q6RVD6 105 aa2.28□□□□□ -2.04
LRCH3-216ENST00000481048 MT1MQ8N339 61 aa2.28□□□□□ -2.04
LRCH3-216ENST00000481048 PSPHP1O15172 72 aa2.27□□□□□ -2.05
LRCH3-216ENST00000481048 MT4P47944 62 aa2.27□□□□□ -2.05
LRCH3-216ENST00000481048 KRTAP12-1P59990 96 aa2.27□□□□□ -2.05
LRCH3-216ENST00000481048 MT1LQ93083 61 aa2.27□□□□□ -2.05
LRCH3-216ENST00000481048 A6NED7 52 aa2.25□□□□□ -2.05
LRCH3-216ENST00000481048 PRR15LQ9BU68 103 aa2.25□□□□□ -2.05
LRCH3-216ENST00000481048 TNP1P09430 55 aa2.23□□□□□ -2.05
LRCH3-216ENST00000481048 CDC42SE1Q9NRR8 79 aa2.23□□□□□ -2.05
LRCH3-216ENST00000481048 HMCN1Q96RW7 5635 aa2.23□□□□□ -2.05
LRCH3-216ENST00000481048 KRTAP21-2Q3LI59 83 aa2.22□□□□□ -2.05
LRCH3-216ENST00000481048 KRTAP5-10Q6L8G5 202 aa2.22□□□□□ -2.05
LRCH3-216ENST00000481048 C10orf95Q9H7T3 257 aa2.22□□□□□ -2.05
LRCH3-216ENST00000481048 LINC01558Q9Y6Z2 57 aa2.2□□□□□ -2.06
LRCH3-216ENST00000481048 A0A1B0GU69 56 aa2.19□□□□□ -2.06
LRCH3-216ENST00000481048 AHNAK2Q8IVF2 5795 aa2.18□□□□□ -2.06
LRCH3-216ENST00000481048 SPRR5A0A1B0GTR4 108 aa2.14□□□□□ -2.07
LRCH3-216ENST00000481048 KRTAP12-3P60328 96 aa2.14□□□□□ -2.07
LRCH3-216ENST00000481048 KRTAP12-4P60329 112 aa2.12□□□□□ -2.07
LRCH3-216ENST00000481048 KRTAP20-2Q3LI61 65 aa2.12□□□□□ -2.07
LRCH3-216ENST00000481048 UQCR11O14957 56 aa2.1□□□□□ -2.07
LRCH3-216ENST00000481048 MIR22HGQ0VDD5 57 aa2.09□□□□□ -2.07
LRCH3-216ENST00000481048 SYNE1Q8NF91 8797 aaKnown RBP2.06□□□□□ -2.08
LRCH3-216ENST00000481048 KRTAP25-1Q3LHN0 102 aa2.05□□□□□ -2.08
LRCH3-216ENST00000481048 K7ERS5 55 aa2.03□□□□□ -2.08
LRCH3-216ENST00000481048 ROMO1P60602 79 aa1.97□□□□□ -2.09
LRCH3-216ENST00000481048 MT1AP04731 61 aa1.94□□□□□ -2.1
LRCH3-216ENST00000481048 KRTAP6-1Q3LI64 71 aa1.91□□□□□ -2.1
LRCH3-216ENST00000481048 KRTAP6-2Q3LI66 62 aa1.85□□□□□ -2.11
LRCH3-216ENST00000481048 MUC5BQ9HC84 5762 aaPredicted RBP1.82□□□□□ -2.12
LRCH3-216ENST00000481048 MUC5ACP98088 5654 aa1.81□□□□□ -2.12
LRCH3-216ENST00000481048 AHNAKQ09666 5890 aaKnown RBP1.78□□□□□ -2.12
LRCH3-216ENST00000481048 LUZP6Q538Z0 58 aa1.77□□□□□ -2.13
LRCH3-216ENST00000481048 INE1O15225 51 aa1.57□□□□□ -2.16
LRCH3-216ENST00000481048 PHGR1C9JFL3 82 aa1.29□□□□□ -2.2
LRCH3-216ENST00000481048 KRTAP21-1Q3LI58 79 aa1.01□□□□□ -2.25
LRCH3-216ENST00000481048 PRM1P04553 51 aa1□□□□□ -2.25
LRCH3-216ENST00000481048 MUC16Q8WXI7 14507 aa0.98□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 9.9 ms