RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 KRTAP4-9Q9BYQ8 210 aa5.92□□□□□ -1.46
HSPG2-209ENST00000480900 KRTAP12-3P60328 96 aa5.89□□□□□ -1.47
HSPG2-209ENST00000480900 V9GYY9 64 aa5.88□□□□□ -1.47
HSPG2-209ENST00000480900 KRTAP4-3Q9BYR4 195 aa5.86□□□□□ -1.47
HSPG2-209ENST00000480900 LCE4AQ5TA78 99 aa5.85□□□□□ -1.47
HSPG2-209ENST00000480900 K7ERS5 55 aa5.84□□□□□ -1.47
HSPG2-209ENST00000480900 KRTAP25-1Q3LHN0 102 aa5.84□□□□□ -1.47
HSPG2-209ENST00000480900 Q1T7F1 81 aa5.83□□□□□ -1.48
HSPG2-209ENST00000480900 PSPHP1O15172 72 aa5.82□□□□□ -1.48
HSPG2-209ENST00000480900 LCE1DQ5T752 114 aa5.82□□□□□ -1.48
HSPG2-209ENST00000480900 GPR98Q8WXG9 6306 aa5.78□□□□□ -1.48
HSPG2-209ENST00000480900 KRTAP5-4Q6L8H1 288 aa5.75□□□□□ -1.49
HSPG2-209ENST00000480900 MT4P47944 62 aa5.74□□□□□ -1.49
HSPG2-209ENST00000480900 KRTAP4-7Q9BYR0 210 aa5.73□□□□□ -1.49
HSPG2-209ENST00000480900 HMCN1Q96RW7 5635 aa5.69□□□□□ -1.5
HSPG2-209ENST00000480900 KRTAP23-1A1A580 65 aa5.63□□□□□ -1.51
HSPG2-209ENST00000480900 A6NED7 52 aa5.63□□□□□ -1.51
HSPG2-209ENST00000480900 KRTAP19-4Q3LI73 84 aa5.6□□□□□ -1.51
HSPG2-209ENST00000480900 KRTAP4-6Q9BYQ5 205 aa5.59□□□□□ -1.51
HSPG2-209ENST00000480900 KRTAP5-5Q701N2 237 aaPredicted RBP5.53□□□□□ -1.52
HSPG2-209ENST00000480900 RPS28P62857 69 aaKnown RBP5.52□□□□□ -1.53
HSPG2-209ENST00000480900 CDC42SE1Q9NRR8 79 aa5.52□□□□□ -1.53
HSPG2-209ENST00000480900 KRTAP15-1Q3LI76 137 aa5.51□□□□□ -1.53
HSPG2-209ENST00000480900 AHNAK2Q8IVF2 5795 aa5.48□□□□□ -1.53
HSPG2-209ENST00000480900 LOC100996750A0A140TA64 210 aa5.43□□□□□ -1.54
HSPG2-209ENST00000480900 ROMO1P60602 79 aa5.43□□□□□ -1.54
HSPG2-209ENST00000480900 PCP4P48539 62 aa5.42□□□□□ -1.54
HSPG2-209ENST00000480900 LCE3CQ5T5A8 94 aa5.42□□□□□ -1.54
HSPG2-209ENST00000480900 KRTAP20-2Q3LI61 65 aa5.41□□□□□ -1.54
HSPG2-209ENST00000480900 SPRR5A0A1B0GTR4 108 aa5.4□□□□□ -1.54
HSPG2-209ENST00000480900 KRTAP5-10Q6L8G5 202 aa5.4□□□□□ -1.54
HSPG2-209ENST00000480900 KRTAP12-4P60329 112 aa5.38□□□□□ -1.55
HSPG2-209ENST00000480900 KRTAP5-3Q6L8H2 238 aa5.29□□□□□ -1.56
HSPG2-209ENST00000480900 SYNE1Q8NF91 8797 aaKnown RBP5.28□□□□□ -1.56
HSPG2-209ENST00000480900 KRTAP5-7Q6L8G8 165 aa5.2□□□□□ -1.58
HSPG2-209ENST00000480900 MT1AP04731 61 aa5.17□□□□□ -1.58
HSPG2-209ENST00000480900 KRTAP6-1Q3LI64 71 aa5.12□□□□□ -1.59
HSPG2-209ENST00000480900 KRTAP9-6A8MVA2 160 aa5.11□□□□□ -1.59
HSPG2-209ENST00000480900 KRTAP5-2Q701N4 177 aa5.04□□□□□ -1.6
HSPG2-209ENST00000480900 KRTAP9-4Q9BYQ2 154 aa4.98□□□□□ -1.61
HSPG2-209ENST00000480900 KRTAP4-11Q9BYQ6 195 aa4.93□□□□□ -1.62
HSPG2-209ENST00000480900 KRTAP6-2Q3LI66 62 aa4.89□□□□□ -1.63
HSPG2-209ENST00000480900 BRK1Q8WUW1 75 aa4.83□□□□□ -1.64
HSPG2-209ENST00000480900 KRTAP5-8O75690 187 aa4.77□□□□□ -1.65
HSPG2-209ENST00000480900 MT3P25713 68 aa4.72□□□□□ -1.65
HSPG2-209ENST00000480900 OBSCNQ5VST9 7968 aa4.7□□□□□ -1.66
HSPG2-209ENST00000480900 PMAIP1Q13794 54 aa4.54□□□□□ -1.68
HSPG2-209ENST00000480900 KRTAP9-9Q9BYP9 154 aa4.52□□□□□ -1.69
HSPG2-209ENST00000480900 KRTAP5-1Q6L8H4 278 aa4.51□□□□□ -1.69
HSPG2-209ENST00000480900 MUC5ACP98088 5654 aa4.48□□□□□ -1.69
HSPG2-209ENST00000480900 MUC5BQ9HC84 5762 aaPredicted RBP4.48□□□□□ -1.69
HSPG2-209ENST00000480900 AHNAKQ09666 5890 aaKnown RBP4.47□□□□□ -1.69
HSPG2-209ENST00000480900 PRAC1Q96KF2 57 aa4.37□□□□□ -1.71
HSPG2-209ENST00000480900 LCE1EQ5T753 118 aa4.34□□□□□ -1.71
HSPG2-209ENST00000480900 PRO0628Q9UI54 55 aa4.18□□□□□ -1.74
HSPG2-209ENST00000480900 KRTAP4-2Q9BYR5 136 aa4.09□□□□□ -1.75
HSPG2-209ENST00000480900 LCE1BQ5T7P3 118 aa4.05□□□□□ -1.76
HSPG2-209ENST00000480900 LCE1CQ5T751 118 aa4.03□□□□□ -1.76
HSPG2-209ENST00000480900 KTN1-AS1Q86SY8 53 aa4.02□□□□□ -1.77
HSPG2-209ENST00000480900 LCE3DQ9BYE3 92 aa3.91□□□□□ -1.78
HSPG2-209ENST00000480900 SVIPQ8NHG7 77 aa3.85□□□□□ -1.79
HSPG2-209ENST00000480900 LUZP6Q538Z0 58 aa3.72□□□□□ -1.81
HSPG2-209ENST00000480900 LCE3EQ5T5B0 92 aa3.69□□□□□ -1.82
HSPG2-209ENST00000480900 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.68□□□□□ -1.82
HSPG2-209ENST00000480900 KRTAP5-11Q6L8G4 156 aa3.66□□□□□ -1.82
HSPG2-209ENST00000480900 KRTAP4-12Q9BQ66 201 aa3.66□□□□□ -1.82
HSPG2-209ENST00000480900 LCE1FQ5T754 118 aa3.55□□□□□ -1.84
HSPG2-209ENST00000480900 KRTAP21-2Q3LI59 83 aa3.38□□□□□ -1.87
HSPG2-209ENST00000480900 PHGR1C9JFL3 82 aa3.15□□□□□ -1.91
HSPG2-209ENST00000480900 KRTAP4-4Q9BYR3 166 aa3.06□□□□□ -1.92
HSPG2-209ENST00000480900 MUC19Q7Z5P9 8384 aa2.91□□□□□ -1.94
HSPG2-209ENST00000480900 NDUFAF8A1L188 74 aa2.91□□□□□ -1.94
HSPG2-209ENST00000480900 PRM1P04553 51 aa2.77□□□□□ -1.97
HSPG2-209ENST00000480900 KRTAP21-1Q3LI58 79 aa2.39□□□□□ -2.03
HSPG2-209ENST00000480900 INE1O15225 51 aa2.35□□□□□ -2.03
HSPG2-209ENST00000480900 A0A0A0MQY5 61 aa2.27□□□□□ -2.05
HSPG2-209ENST00000480900 MUC16Q8WXI7 14507 aa2.07□□□□□ -2.08
HSPG2-209ENST00000480900 H3BS24 57 aa1.77□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 57.5 ms