RNA–Protein interactions for RNA: ENST00000480227.5

PKD1-213, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 1 (best)

Gene PKD1, Length 2,353 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-213ENST00000480227 INE1O15225 51 aa5.93□□□□□ -1.46
PKD1-213ENST00000480227 MUC12Q9UKN1 5478 aa5.86□□□□□ -1.47
PKD1-213ENST00000480227 MACF1Q9UPN3 7388 aaKnown RBP5.85□□□□□ -1.47
PKD1-213ENST00000480227 KRTAP9-6A0A140TA67 174 aa5.82□□□□□ -1.48
PKD1-213ENST00000480227 KRTAP19-4Q3LI73 84 aa5.81□□□□□ -1.48
PKD1-213ENST00000480227 SYNE2Q8WXH0 6885 aaKnown RBP5.76□□□□□ -1.49
PKD1-213ENST00000480227 KRTAP2-3P0C7H8 128 aa5.73□□□□□ -1.49
PKD1-213ENST00000480227 KRTAP2-4Q9BYR9 128 aa5.73□□□□□ -1.49
PKD1-213ENST00000480227 KRTAP2-1Q9BYU5 128 aa5.73□□□□□ -1.49
PKD1-213ENST00000480227 KRTAP4-3Q9BYR4 195 aa5.72□□□□□ -1.49
PKD1-213ENST00000480227 LOC100996750A0A140TA64 210 aa5.66□□□□□ -1.5
PKD1-213ENST00000480227 KRTAP19-3Q7Z4W3 81 aa5.63□□□□□ -1.51
PKD1-213ENST00000480227 DSTQ03001 7570 aaKnown RBP5.62□□□□□ -1.51
PKD1-213ENST00000480227 MT1MQ8N339 61 aa5.61□□□□□ -1.51
PKD1-213ENST00000480227 MT1GP13640 62 aa5.6□□□□□ -1.51
PKD1-213ENST00000480227 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.56□□□□□ -1.52
PKD1-213ENST00000480227 SPRR2FQ96RM1 72 aa5.53□□□□□ -1.52
PKD1-213ENST00000480227 MDN1Q9NU22 5596 aa5.49□□□□□ -1.53
PKD1-213ENST00000480227 LCE5AQ5TCM9 118 aa5.45□□□□□ -1.54
PKD1-213ENST00000480227 KRTAP9-7A8MTY7 169 aa5.32□□□□□ -1.56
PKD1-213ENST00000480227 KRTAP5-9P26371 169 aa5.29□□□□□ -1.56
PKD1-213ENST00000480227 KRTAP6-3Q3LI67 103 aa5.27□□□□□ -1.57
PKD1-213ENST00000480227 LCE1AQ5T7P2 110 aa5.16□□□□□ -1.58
PKD1-213ENST00000480227 SPRR2EP22531 72 aa5.15□□□□□ -1.58
PKD1-213ENST00000480227 SPRR2BP35325 72 aa5.15□□□□□ -1.58
PKD1-213ENST00000480227 SPRR2AP35326 72 aa5.15□□□□□ -1.58
PKD1-213ENST00000480227 LCE3BQ5TA77 95 aa5.15□□□□□ -1.58
PKD1-213ENST00000480227 SYNE1Q8NF91 8797 aaKnown RBP5.14□□□□□ -1.59
PKD1-213ENST00000480227 KRTAP12-4P60329 112 aa5.1□□□□□ -1.59
PKD1-213ENST00000480227 KRTAP6-1Q3LI64 71 aa5.08□□□□□ -1.6
PKD1-213ENST00000480227 NEBP20929 6669 aa5.07□□□□□ -1.6
PKD1-213ENST00000480227 KRTAP4-9Q9BYQ8 210 aa5.04□□□□□ -1.6
PKD1-213ENST00000480227 MT1AP04731 61 aa4.99□□□□□ -1.61
PKD1-213ENST00000480227 KRTAP5-5Q701N2 237 aaPredicted RBP4.97□□□□□ -1.61
PKD1-213ENST00000480227 SPRR2DP22532 72 aa4.96□□□□□ -1.62
PKD1-213ENST00000480227 LCE3DQ9BYE3 92 aa4.8□□□□□ -1.64
PKD1-213ENST00000480227 LCE3EQ5T5B0 92 aa4.72□□□□□ -1.65
PKD1-213ENST00000480227 KRTAP9-4Q9BYQ2 154 aa4.71□□□□□ -1.65
PKD1-213ENST00000480227 OBSCNQ5VST9 7968 aa4.7□□□□□ -1.66
PKD1-213ENST00000480227 KRTAP20-1Q3LI63 56 aa4.67□□□□□ -1.66
PKD1-213ENST00000480227 KRTAP6-2Q3LI66 62 aa4.58□□□□□ -1.68
PKD1-213ENST00000480227 KRTAP2-2Q9BYT5 123 aa4.55□□□□□ -1.68
PKD1-213ENST00000480227 PRM1P04553 51 aa4.5□□□□□ -1.69
PKD1-213ENST00000480227 MT3P25713 68 aa4.49□□□□□ -1.69
PKD1-213ENST00000480227 KRTAP5-4Q6L8H1 288 aa4.42□□□□□ -1.7
PKD1-213ENST00000480227 MT4P47944 62 aa4.4□□□□□ -1.71
PKD1-213ENST00000480227 HMCN1Q96RW7 5635 aa4.38□□□□□ -1.71
PKD1-213ENST00000480227 KRTAP4-6Q9BYQ5 205 aa4.33□□□□□ -1.72
PKD1-213ENST00000480227 LCE1DQ5T752 114 aa4.3□□□□□ -1.72
PKD1-213ENST00000480227 LCE4AQ5TA78 99 aa4.28□□□□□ -1.72
PKD1-213ENST00000480227 KRTAP20-2Q3LI61 65 aa4.18□□□□□ -1.74
PKD1-213ENST00000480227 GPR98Q8WXG9 6306 aa4.15□□□□□ -1.75
PKD1-213ENST00000480227 KRTAP5-2Q701N4 177 aa4.11□□□□□ -1.75
PKD1-213ENST00000480227 KRTAP5-3Q6L8H2 238 aa3.97□□□□□ -1.77
PKD1-213ENST00000480227 MUC5ACP98088 5654 aa3.87□□□□□ -1.79
PKD1-213ENST00000480227 AHNAK2Q8IVF2 5795 aa3.87□□□□□ -1.79
PKD1-213ENST00000480227 LCE1BQ5T7P3 118 aa3.69□□□□□ -1.82
PKD1-213ENST00000480227 LCE1EQ5T753 118 aa3.68□□□□□ -1.82
PKD1-213ENST00000480227 KRTAP4-11Q9BYQ6 195 aa3.65□□□□□ -1.83
PKD1-213ENST00000480227 KRTAP5-10Q6L8G5 202 aa3.63□□□□□ -1.83
PKD1-213ENST00000480227 KRTAP4-2Q9BYR5 136 aa3.54□□□□□ -1.84
PKD1-213ENST00000480227 KRTAP5-1Q6L8H4 278 aa3.53□□□□□ -1.84
PKD1-213ENST00000480227 KRTAP5-8O75690 187 aa3.51□□□□□ -1.85
PKD1-213ENST00000480227 LCE1CQ5T751 118 aa3.49□□□□□ -1.85
PKD1-213ENST00000480227 KRTAP5-7Q6L8G8 165 aa3.43□□□□□ -1.86
PKD1-213ENST00000480227 MUC5BQ9HC84 5762 aaPredicted RBP3.35□□□□□ -1.87
PKD1-213ENST00000480227 AHNAKQ09666 5890 aaKnown RBP3.3□□□□□ -1.88
PKD1-213ENST00000480227 KRTAP21-2Q3LI59 83 aa3.28□□□□□ -1.88
PKD1-213ENST00000480227 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.27□□□□□ -1.89
PKD1-213ENST00000480227 KRTAP9-9Q9BYP9 154 aa3.18□□□□□ -1.9
PKD1-213ENST00000480227 KRTAP4-4Q9BYR3 166 aa3.05□□□□□ -1.92
PKD1-213ENST00000480227 KRTAP5-11Q6L8G4 156 aa3.01□□□□□ -1.93
PKD1-213ENST00000480227 KRTAP4-12Q9BQ66 201 aa2.93□□□□□ -1.94
PKD1-213ENST00000480227 LCE1FQ5T754 118 aa2.92□□□□□ -1.94
PKD1-213ENST00000480227 MUC19Q7Z5P9 8384 aa2.9□□□□□ -1.95
PKD1-213ENST00000480227 KRTAP21-1Q3LI58 79 aa2.78□□□□□ -1.97
PKD1-213ENST00000480227 PHGR1C9JFL3 82 aa2.61□□□□□ -1.99
PKD1-213ENST00000480227 MUC16Q8WXI7 14507 aa1.71□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 114.7 ms