RNA–Protein interactions for RNA: ENST00000480000.5

APOBEC3G-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3G, humanhuman

TSL 2

Gene APOBEC3G, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3G-204ENST00000480000 SEC61GP60059 68 aa4.37□□□□□ -1.71
APOBEC3G-204ENST00000480000 LCE3AQ5TA76 89 aa4.34□□□□□ -1.71
APOBEC3G-204ENST00000480000 C10orf95Q9H7T3 257 aa4.34□□□□□ -1.71
APOBEC3G-204ENST00000480000 KRTAP5-7Q6L8G8 165 aa4.31□□□□□ -1.72
APOBEC3G-204ENST00000480000 KRTAP5-3Q6L8H2 238 aa4.28□□□□□ -1.72
APOBEC3G-204ENST00000480000 KRTAP4-7Q9BYR0 210 aa4.26□□□□□ -1.73
APOBEC3G-204ENST00000480000 TNP1P09430 55 aa4.25□□□□□ -1.73
APOBEC3G-204ENST00000480000 KRTAP5-5Q701N2 237 aaPredicted RBP4.25□□□□□ -1.73
APOBEC3G-204ENST00000480000 SMIM26A0A096LP01 95 aa4.24□□□□□ -1.73
APOBEC3G-204ENST00000480000 A8MU10 97 aa4.24□□□□□ -1.73
APOBEC3G-204ENST00000480000 H7BZZ5 65 aa4.22□□□□□ -1.73
APOBEC3G-204ENST00000480000 KRTAP20-2Q3LI61 65 aa4.22□□□□□ -1.73
APOBEC3G-204ENST00000480000 SPRR5A0A1B0GTR4 108 aa4.2□□□□□ -1.74
APOBEC3G-204ENST00000480000 COX7CP15954 63 aa4.19□□□□□ -1.74
APOBEC3G-204ENST00000480000 KRTAP12-3P60328 96 aa4.18□□□□□ -1.74
APOBEC3G-204ENST00000480000 A0A1B0GU69 56 aa4.16□□□□□ -1.74
APOBEC3G-204ENST00000480000 ANAPC13Q9BS18 74 aa4.15□□□□□ -1.75
APOBEC3G-204ENST00000480000 SYNE1Q8NF91 8797 aaKnown RBP4.08□□□□□ -1.76
APOBEC3G-204ENST00000480000 KRTAP12-4P60329 112 aa4.08□□□□□ -1.76
APOBEC3G-204ENST00000480000 LOC100996750A0A140TA64 210 aa4.04□□□□□ -1.76
APOBEC3G-204ENST00000480000 ATP5EP56381 51 aaPredicted RBP3.99□□□□□ -1.77
APOBEC3G-204ENST00000480000 CCDC179H3BU77 68 aa3.98□□□□□ -1.77
APOBEC3G-204ENST00000480000 KRTAP15-1Q3LI76 137 aa3.97□□□□□ -1.77
APOBEC3G-204ENST00000480000 LINC01558Q9Y6Z2 57 aa3.96□□□□□ -1.78
APOBEC3G-204ENST00000480000 PRR15LQ9BU68 103 aa3.94□□□□□ -1.78
APOBEC3G-204ENST00000480000 KRTAP25-1Q3LHN0 102 aa3.93□□□□□ -1.78
APOBEC3G-204ENST00000480000 KRTAP5-2Q701N4 177 aa3.92□□□□□ -1.78
APOBEC3G-204ENST00000480000 TMEM258P61165 79 aa3.91□□□□□ -1.78
APOBEC3G-204ENST00000480000 KRTAP4-11Q9BYQ6 195 aa3.91□□□□□ -1.78
APOBEC3G-204ENST00000480000 KRTAP4-12Q9BQ66 201 aa3.88□□□□□ -1.79
APOBEC3G-204ENST00000480000 UQCR11O14957 56 aa3.86□□□□□ -1.79
APOBEC3G-204ENST00000480000 LCE3CQ5T5A8 94 aa3.85□□□□□ -1.79
APOBEC3G-204ENST00000480000 KRTAP5-8O75690 187 aa3.82□□□□□ -1.8
APOBEC3G-204ENST00000480000 MT1AP04731 61 aa3.82□□□□□ -1.8
APOBEC3G-204ENST00000480000 KRTAP6-1Q3LI64 71 aa3.82□□□□□ -1.8
APOBEC3G-204ENST00000480000 RPS28P62857 69 aaKnown RBP3.81□□□□□ -1.8
APOBEC3G-204ENST00000480000 KRTAP9-4Q9BYQ2 154 aa3.81□□□□□ -1.8
APOBEC3G-204ENST00000480000 MIR22HGQ0VDD5 57 aa3.74□□□□□ -1.81
APOBEC3G-204ENST00000480000 KRTAP9-9Q9BYP9 154 aa3.74□□□□□ -1.81
APOBEC3G-204ENST00000480000 MUC5BQ9HC84 5762 aaPredicted RBP3.74□□□□□ -1.81
APOBEC3G-204ENST00000480000 V9GYY9 64 aa3.73□□□□□ -1.81
APOBEC3G-204ENST00000480000 MUC5ACP98088 5654 aa3.72□□□□□ -1.81
APOBEC3G-204ENST00000480000 PRAC1Q96KF2 57 aa3.71□□□□□ -1.82
APOBEC3G-204ENST00000480000 AHNAKQ09666 5890 aaKnown RBP3.7□□□□□ -1.82
APOBEC3G-204ENST00000480000 KRTAP9-6A8MVA2 160 aa3.69□□□□□ -1.82
APOBEC3G-204ENST00000480000 PRO0628Q9UI54 55 aa3.69□□□□□ -1.82
APOBEC3G-204ENST00000480000 KRTAP6-2Q3LI66 62 aa3.67□□□□□ -1.82
APOBEC3G-204ENST00000480000 K7ERS5 55 aa3.65□□□□□ -1.83
APOBEC3G-204ENST00000480000 OBSCNQ5VST9 7968 aa3.64□□□□□ -1.83
APOBEC3G-204ENST00000480000 PSPHP1O15172 72 aa3.63□□□□□ -1.83
APOBEC3G-204ENST00000480000 Q1T7F1 81 aa3.61□□□□□ -1.83
APOBEC3G-204ENST00000480000 A6NED7 52 aa3.57□□□□□ -1.84
APOBEC3G-204ENST00000480000 KRTAP5-1Q6L8H4 278 aa3.56□□□□□ -1.84
APOBEC3G-204ENST00000480000 MT3P25713 68 aa3.49□□□□□ -1.85
APOBEC3G-204ENST00000480000 PMAIP1Q13794 54 aa3.48□□□□□ -1.85
APOBEC3G-204ENST00000480000 BRK1Q8WUW1 75 aa3.45□□□□□ -1.86
APOBEC3G-204ENST00000480000 CDC42SE1Q9NRR8 79 aa3.45□□□□□ -1.86
APOBEC3G-204ENST00000480000 ROMO1P60602 79 aa3.43□□□□□ -1.86
APOBEC3G-204ENST00000480000 NDUFAF8A1L188 74 aa3.42□□□□□ -1.86
APOBEC3G-204ENST00000480000 KTN1-AS1Q86SY8 53 aa3.34□□□□□ -1.87
APOBEC3G-204ENST00000480000 LCE1EQ5T753 118 aa3.32□□□□□ -1.88
APOBEC3G-204ENST00000480000 KRTAP4-2Q9BYR5 136 aa3.16□□□□□ -1.9
APOBEC3G-204ENST00000480000 LCE1CQ5T751 118 aa3.08□□□□□ -1.92
APOBEC3G-204ENST00000480000 LCE1BQ5T7P3 118 aa3.08□□□□□ -1.92
APOBEC3G-204ENST00000480000 LCE1FQ5T754 118 aa2.9□□□□□ -1.95
APOBEC3G-204ENST00000480000 KRTAP5-11Q6L8G4 156 aa2.81□□□□□ -1.96
APOBEC3G-204ENST00000480000 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.81□□□□□ -1.96
APOBEC3G-204ENST00000480000 LUZP6Q538Z0 58 aa2.75□□□□□ -1.97
APOBEC3G-204ENST00000480000 LCE3DQ9BYE3 92 aa2.71□□□□□ -1.98
APOBEC3G-204ENST00000480000 KRTAP21-2Q3LI59 83 aa2.56□□□□□ -2
APOBEC3G-204ENST00000480000 PHGR1C9JFL3 82 aa2.53□□□□□ -2
APOBEC3G-204ENST00000480000 LCE3EQ5T5B0 92 aa2.51□□□□□ -2.01
APOBEC3G-204ENST00000480000 INE1O15225 51 aa2.32□□□□□ -2.04
APOBEC3G-204ENST00000480000 KRTAP4-4Q9BYR3 166 aa2.3□□□□□ -2.04
APOBEC3G-204ENST00000480000 MUC19Q7Z5P9 8384 aa2.26□□□□□ -2.05
APOBEC3G-204ENST00000480000 KRTAP21-1Q3LI58 79 aa1.95□□□□□ -2.1
APOBEC3G-204ENST00000480000 PRM1P04553 51 aa1.72□□□□□ -2.13
APOBEC3G-204ENST00000480000 MUC16Q8WXI7 14507 aa1.63□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 51.2 ms