RNA–Protein interactions for RNA: ENST00000479899.5

CCDC58-205, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3 BASIC

Gene CCDC58, Length 545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-205ENST00000479899 KRTAP19-5Q3LI72 72 aa3.88□□□□□ -1.79
CCDC58-205ENST00000479899 KRTAP13-4Q3LI77 160 aa3.88□□□□□ -1.79
CCDC58-205ENST00000479899 PP632Q6XCG6 107 aa3.88□□□□□ -1.79
CCDC58-205ENST00000479899 A0A0D9SG42 100 aa3.85□□□□□ -1.79
CCDC58-205ENST00000479899 SCGB1A1P11684 91 aa3.85□□□□□ -1.79
CCDC58-205ENST00000479899 MT1MQ8N339 61 aa3.85□□□□□ -1.79
CCDC58-205ENST00000479899 KRTAP4-3Q9BYR4 195 aa3.81□□□□□ -1.8
CCDC58-205ENST00000479899 LCE3AQ5TA76 89 aa3.79□□□□□ -1.8
CCDC58-205ENST00000479899 MT1LQ93083 61 aa3.78□□□□□ -1.8
CCDC58-205ENST00000479899 KRTAP5-7Q6L8G8 165 aa3.76□□□□□ -1.81
CCDC58-205ENST00000479899 SPINT4Q6UDR6 99 aa3.74□□□□□ -1.81
CCDC58-205ENST00000479899 SPRR5A0A1B0GTR4 108 aa3.71□□□□□ -1.82
CCDC58-205ENST00000479899 SPATA8Q6RVD6 105 aa3.69□□□□□ -1.82
CCDC58-205ENST00000479899 SEC61GP60059 68 aa3.68□□□□□ -1.82
CCDC58-205ENST00000479899 C10orf95Q9H7T3 257 aa3.67□□□□□ -1.82
CCDC58-205ENST00000479899 SNURFQ9Y675 71 aa3.67□□□□□ -1.82
CCDC58-205ENST00000479899 KRTAP20-2Q3LI61 65 aa3.64□□□□□ -1.83
CCDC58-205ENST00000479899 KRTAP12-1P59990 96 aa3.63□□□□□ -1.83
CCDC58-205ENST00000479899 SERP1Q9Y6X1 66 aa3.62□□□□□ -1.83
CCDC58-205ENST00000479899 J3QR89 54 aa3.61□□□□□ -1.83
CCDC58-205ENST00000479899 SMIM20Q8N5G0 67 aa3.6□□□□□ -1.83
CCDC58-205ENST00000479899 SPANXA2-OT1Q8N9U9 137 aa3.58□□□□□ -1.84
CCDC58-205ENST00000479899 A0A1B0GV90 55 aa3.57□□□□□ -1.84
CCDC58-205ENST00000479899 COA5Q86WW8 74 aa3.57□□□□□ -1.84
CCDC58-205ENST00000479899 OBSCNQ5VST9 7968 aa3.56□□□□□ -1.84
CCDC58-205ENST00000479899 A0A1B0GU33 70 aa3.56□□□□□ -1.84
CCDC58-205ENST00000479899 TNP1P09430 55 aa3.54□□□□□ -1.84
CCDC58-205ENST00000479899 KRTAP12-4P60329 112 aa3.52□□□□□ -1.85
CCDC58-205ENST00000479899 KRTAP5-5Q701N2 237 aaPredicted RBP3.52□□□□□ -1.85
CCDC58-205ENST00000479899 SYNE1Q8NF91 8797 aaKnown RBP3.5□□□□□ -1.85
CCDC58-205ENST00000479899 KRTAP12-3P60328 96 aa3.49□□□□□ -1.85
CCDC58-205ENST00000479899 SMIM26A0A096LP01 95 aa3.46□□□□□ -1.86
CCDC58-205ENST00000479899 SERP2Q8N6R1 65 aa3.4□□□□□ -1.87
CCDC58-205ENST00000479899 A0A1B0GU69 56 aa3.39□□□□□ -1.87
CCDC58-205ENST00000479899 LCE3DQ9BYE3 92 aa3.37□□□□□ -1.87
CCDC58-205ENST00000479899 AHNAKQ09666 5890 aaKnown RBP3.36□□□□□ -1.87
CCDC58-205ENST00000479899 MUC5BQ9HC84 5762 aaPredicted RBP3.33□□□□□ -1.88
CCDC58-205ENST00000479899 MUC5ACP98088 5654 aa3.33□□□□□ -1.88
CCDC58-205ENST00000479899 K7ERU9 68 aa3.32□□□□□ -1.88
CCDC58-205ENST00000479899 KRTAP5-8O75690 187 aa3.3□□□□□ -1.88
CCDC58-205ENST00000479899 LCE1CQ5T751 118 aa3.3□□□□□ -1.88
CCDC58-205ENST00000479899 LCE1BQ5T7P3 118 aa3.3□□□□□ -1.88
CCDC58-205ENST00000479899 KRTAP5-2Q701N4 177 aa3.27□□□□□ -1.89
CCDC58-205ENST00000479899 KRTAP6-1Q3LI64 71 aa3.24□□□□□ -1.89
CCDC58-205ENST00000479899 H7BZZ5 65 aa3.23□□□□□ -1.89
CCDC58-205ENST00000479899 MT1AP04731 61 aa3.21□□□□□ -1.9
CCDC58-205ENST00000479899 COX7CP15954 63 aa3.21□□□□□ -1.9
CCDC58-205ENST00000479899 KRTAP25-1Q3LHN0 102 aa3.18□□□□□ -1.9
CCDC58-205ENST00000479899 PRR15LQ9BU68 103 aa3.18□□□□□ -1.9
CCDC58-205ENST00000479899 KRTAP6-2Q3LI66 62 aa3.15□□□□□ -1.91
CCDC58-205ENST00000479899 UQCR11O14957 56 aa3.06□□□□□ -1.92
CCDC58-205ENST00000479899 LINC01558Q9Y6Z2 57 aa3.05□□□□□ -1.92
CCDC58-205ENST00000479899 PSPHP1O15172 72 aa3□□□□□ -1.93
CCDC58-205ENST00000479899 K7ERS5 55 aa2.99□□□□□ -1.93
CCDC58-205ENST00000479899 MIR22HGQ0VDD5 57 aa2.98□□□□□ -1.93
CCDC58-205ENST00000479899 LUZP6Q538Z0 58 aa2.98□□□□□ -1.93
CCDC58-205ENST00000479899 ANAPC13Q9BS18 74 aa2.96□□□□□ -1.94
CCDC58-205ENST00000479899 ATP5EP56381 51 aaPredicted RBP2.94□□□□□ -1.94
CCDC58-205ENST00000479899 CCDC179H3BU77 68 aa2.92□□□□□ -1.94
CCDC58-205ENST00000479899 RPS28P62857 69 aaKnown RBP2.84□□□□□ -1.95
CCDC58-205ENST00000479899 PRO0628Q9UI54 55 aa2.8□□□□□ -1.96
CCDC58-205ENST00000479899 CDC42SE1Q9NRR8 79 aa2.79□□□□□ -1.96
CCDC58-205ENST00000479899 TMEM258P61165 79 aa2.74□□□□□ -1.97
CCDC58-205ENST00000479899 Q1T7F1 81 aa2.73□□□□□ -1.97
CCDC58-205ENST00000479899 ROMO1P60602 79 aa2.72□□□□□ -1.97
CCDC58-205ENST00000479899 V9GYY9 64 aa2.69□□□□□ -1.98
CCDC58-205ENST00000479899 A6NED7 52 aa2.66□□□□□ -1.98
CCDC58-205ENST00000479899 MUC19Q7Z5P9 8384 aa2.59□□□□□ -2
CCDC58-205ENST00000479899 PHGR1C9JFL3 82 aa2.33□□□□□ -2.04
CCDC58-205ENST00000479899 KRTAP21-2Q3LI59 83 aa2.33□□□□□ -2.04
CCDC58-205ENST00000479899 BRK1Q8WUW1 75 aa1.97□□□□□ -2.09
CCDC58-205ENST00000479899 KTN1-AS1Q86SY8 53 aa1.83□□□□□ -2.12
CCDC58-205ENST00000479899 PMAIP1Q13794 54 aa1.81□□□□□ -2.12
CCDC58-205ENST00000479899 KRTAP21-1Q3LI58 79 aa1.73□□□□□ -2.13
CCDC58-205ENST00000479899 MUC16Q8WXI7 14507 aa1.41□□□□□ -2.18
CCDC58-205ENST00000479899 PRM1P04553 51 aa1.4□□□□□ -2.19
CCDC58-205ENST00000479899 INE1O15225 51 aa1.21□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 64.8 ms