RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 KRTAP4-3Q9BYR4 195 aa6.8□□□□□ -1.32
COL13A1-208ENST00000479733 CRCT1Q9UGL9 99 aa6.74□□□□□ -1.33
COL13A1-208ENST00000479733 KRTAP19-4Q3LI73 84 aa6.72□□□□□ -1.33
COL13A1-208ENST00000479733 MT1GP13640 62 aa6.72□□□□□ -1.33
COL13A1-208ENST00000479733 MUC12Q9UKN1 5478 aa6.66□□□□□ -1.34
COL13A1-208ENST00000479733 KRTAP19-6Q3LI70 58 aa6.66□□□□□ -1.34
COL13A1-208ENST00000479733 DSTQ03001 7570 aaKnown RBP6.65□□□□□ -1.34
COL13A1-208ENST00000479733 KRTAP12-4P60329 112 aa6.63□□□□□ -1.35
COL13A1-208ENST00000479733 FCGBPQ9Y6R7 5405 aaPredicted RBP6.61□□□□□ -1.35
COL13A1-208ENST00000479733 LCE2DQ5TA82 110 aaPredicted RBP6.54□□□□□ -1.36
COL13A1-208ENST00000479733 MT1MQ8N339 61 aa6.46□□□□□ -1.38
COL13A1-208ENST00000479733 KRTAP19-3Q7Z4W3 81 aa6.38□□□□□ -1.39
COL13A1-208ENST00000479733 LCE3BQ5TA77 95 aa6.34□□□□□ -1.39
COL13A1-208ENST00000479733 KRTAP4-9Q9BYQ8 210 aa6.34□□□□□ -1.39
COL13A1-208ENST00000479733 SYNE1Q8NF91 8797 aaKnown RBP6.33□□□□□ -1.4
COL13A1-208ENST00000479733 KRTAP9-2Q9BYQ4 174 aa6.28□□□□□ -1.4
COL13A1-208ENST00000479733 MACF1Q9UPN3 7388 aaKnown RBP6.28□□□□□ -1.4
COL13A1-208ENST00000479733 SYNE2Q8WXH0 6885 aaKnown RBP6.15□□□□□ -1.42
COL13A1-208ENST00000479733 SPRR2FQ96RM1 72 aa6.1□□□□□ -1.43
COL13A1-208ENST00000479733 LCE5AQ5TCM9 118 aa6.08□□□□□ -1.44
COL13A1-208ENST00000479733 KRTAP6-1Q3LI64 71 aa6.01□□□□□ -1.45
COL13A1-208ENST00000479733 KRTAP9-7A8MTY7 169 aa5.99□□□□□ -1.45
COL13A1-208ENST00000479733 LCE3DQ9BYE3 92 aa5.98□□□□□ -1.45
COL13A1-208ENST00000479733 MDN1Q9NU22 5596 aa5.98□□□□□ -1.45
COL13A1-208ENST00000479733 OBSCNQ5VST9 7968 aa5.96□□□□□ -1.46
COL13A1-208ENST00000479733 MT1AP04731 61 aa5.95□□□□□ -1.46
COL13A1-208ENST00000479733 PRM1P04553 51 aa5.92□□□□□ -1.46
COL13A1-208ENST00000479733 LCE3EQ5T5B0 92 aa5.91□□□□□ -1.46
COL13A1-208ENST00000479733 KRTAP5-5Q701N2 237 aaPredicted RBP5.87□□□□□ -1.47
COL13A1-208ENST00000479733 KRTAP5-9P26371 169 aa5.75□□□□□ -1.49
COL13A1-208ENST00000479733 LCE1AQ5T7P2 110 aa5.72□□□□□ -1.49
COL13A1-208ENST00000479733 SPRR2EP22531 72 aa5.66□□□□□ -1.5
COL13A1-208ENST00000479733 SPRR2BP35325 72 aa5.66□□□□□ -1.5
COL13A1-208ENST00000479733 SPRR2AP35326 72 aa5.66□□□□□ -1.5
COL13A1-208ENST00000479733 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.61□□□□□ -1.51
COL13A1-208ENST00000479733 KRTAP6-2Q3LI66 62 aa5.6□□□□□ -1.51
COL13A1-208ENST00000479733 KRTAP9-6A0A140TA67 174 aa5.58□□□□□ -1.52
COL13A1-208ENST00000479733 KRTAP6-3Q3LI67 103 aa5.47□□□□□ -1.53
COL13A1-208ENST00000479733 KRTAP9-4Q9BYQ2 154 aa5.44□□□□□ -1.54
COL13A1-208ENST00000479733 SPRR2DP22532 72 aa5.42□□□□□ -1.54
COL13A1-208ENST00000479733 KRTAP2-2Q9BYT5 123 aa5.34□□□□□ -1.55
COL13A1-208ENST00000479733 MT3P25713 68 aa5.21□□□□□ -1.57
COL13A1-208ENST00000479733 NEBP20929 6669 aa5.2□□□□□ -1.58
COL13A1-208ENST00000479733 LCE1EQ5T753 118 aa5.13□□□□□ -1.59
COL13A1-208ENST00000479733 LCE1DQ5T752 114 aa4.9□□□□□ -1.63
COL13A1-208ENST00000479733 LCE1FQ5T754 118 aa4.89□□□□□ -1.63
COL13A1-208ENST00000479733 KRTAP5-4Q6L8H1 288 aa4.87□□□□□ -1.63
COL13A1-208ENST00000479733 MT4P47944 62 aa4.83□□□□□ -1.64
COL13A1-208ENST00000479733 KRTAP4-6Q9BYQ5 205 aa4.81□□□□□ -1.64
COL13A1-208ENST00000479733 HMCN1Q96RW7 5635 aa4.69□□□□□ -1.66
COL13A1-208ENST00000479733 LCE4AQ5TA78 99 aa4.65□□□□□ -1.66
COL13A1-208ENST00000479733 KRTAP20-2Q3LI61 65 aa4.62□□□□□ -1.67
COL13A1-208ENST00000479733 MUC5ACP98088 5654 aa4.58□□□□□ -1.68
COL13A1-208ENST00000479733 KRTAP20-1Q3LI63 56 aa4.58□□□□□ -1.68
COL13A1-208ENST00000479733 KRTAP4-11Q9BYQ6 195 aa4.49□□□□□ -1.69
COL13A1-208ENST00000479733 KRTAP5-2Q701N4 177 aa4.47□□□□□ -1.69
COL13A1-208ENST00000479733 KRTAP5-3Q6L8H2 238 aa4.4□□□□□ -1.7
COL13A1-208ENST00000479733 LCE1BQ5T7P3 118 aa4.36□□□□□ -1.71
COL13A1-208ENST00000479733 KRTAP9-9Q9BYP9 154 aa4.31□□□□□ -1.72
COL13A1-208ENST00000479733 KRTAP5-10Q6L8G5 202 aa4.27□□□□□ -1.73
COL13A1-208ENST00000479733 KRTAP5-1Q6L8H4 278 aa4.07□□□□□ -1.76
COL13A1-208ENST00000479733 MUC19Q7Z5P9 8384 aa4.03□□□□□ -1.76
COL13A1-208ENST00000479733 KRTAP4-2Q9BYR5 136 aa3.94□□□□□ -1.78
COL13A1-208ENST00000479733 AHNAK2Q8IVF2 5795 aa3.88□□□□□ -1.79
COL13A1-208ENST00000479733 LCE1CQ5T751 118 aa3.85□□□□□ -1.79
COL13A1-208ENST00000479733 KRTAP21-2Q3LI59 83 aa3.8□□□□□ -1.8
COL13A1-208ENST00000479733 KRTAP5-8O75690 187 aa3.77□□□□□ -1.81
COL13A1-208ENST00000479733 KRTAP4-4Q9BYR3 166 aa3.73□□□□□ -1.81
COL13A1-208ENST00000479733 KRTAP21-1Q3LI58 79 aa3.63□□□□□ -1.83
COL13A1-208ENST00000479733 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.58□□□□□ -1.84
COL13A1-208ENST00000479733 KRTAP5-7Q6L8G8 165 aa3.57□□□□□ -1.84
COL13A1-208ENST00000479733 MUC5BQ9HC84 5762 aaPredicted RBP3.48□□□□□ -1.85
COL13A1-208ENST00000479733 GPR98Q8WXG9 6306 aa3.43□□□□□ -1.86
COL13A1-208ENST00000479733 KRTAP4-12Q9BQ66 201 aa3.33□□□□□ -1.88
COL13A1-208ENST00000479733 KRTAP5-11Q6L8G4 156 aa3.27□□□□□ -1.89
COL13A1-208ENST00000479733 PHGR1C9JFL3 82 aa2.85□□□□□ -1.95
COL13A1-208ENST00000479733 AHNAKQ09666 5890 aaKnown RBP2.77□□□□□ -1.97
COL13A1-208ENST00000479733 MUC16Q8WXI7 14507 aa1.99□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 42.9 ms