RNA–Protein interactions for RNA: ENST00000479487.1

ATRX-205, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 408 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-205ENST00000479487 KRTAP8-1Q8IUC2 63 aa1.15□□□□□ -2.23
ATRX-205ENST00000479487 KRTAP6-3Q3LI67 103 aa1.14□□□□□ -2.23
ATRX-205ENST00000479487 KRTAP19-2Q3LHN2 52 aa1.13□□□□□ -2.23
ATRX-205ENST00000479487 DNHD1Q96M86 4753 aa1.13□□□□□ -2.23
ATRX-205ENST00000479487 SPRR2GQ9BYE4 73 aa1.12□□□□□ -2.23
ATRX-205ENST00000479487 LRP2P98164 4655 aa1.12□□□□□ -2.23
ATRX-205ENST00000479487 KRTAP12-3P60328 96 aa1.11□□□□□ -2.23
ATRX-205ENST00000479487 MUC17Q685J3 4493 aa1.1□□□□□ -2.23
ATRX-205ENST00000479487 HERC1Q15751 4861 aa1.09□□□□□ -2.23
ATRX-205ENST00000479487 HYDINQ4G0P3 5121 aa1.08□□□□□ -2.24
ATRX-205ENST00000479487 KMT2CQ8NEZ4 4911 aaKnown RBP1.07□□□□□ -2.24
ATRX-205ENST00000479487 LPAP08519 4548 aa1.07□□□□□ -2.24
ATRX-205ENST00000479487 RYR2Q92736 4967 aa1.06□□□□□ -2.24
ATRX-205ENST00000479487 KRTAP21-3Q3LHN1 58 aa1.06□□□□□ -2.24
ATRX-205ENST00000479487 KRTAP19-8Q3LI54 63 aa1.06□□□□□ -2.24
ATRX-205ENST00000479487 KRTAP2-3P0C7H8 128 aa1.05□□□□□ -2.24
ATRX-205ENST00000479487 KRTAP2-4Q9BYR9 128 aa1.05□□□□□ -2.24
ATRX-205ENST00000479487 KRTAP2-1Q9BYU5 128 aa1.05□□□□□ -2.24
ATRX-205ENST00000479487 MT1XP80297 61 aa1.03□□□□□ -2.24
ATRX-205ENST00000479487 M0R2T5 61 aa1.02□□□□□ -2.25
ATRX-205ENST00000479487 RYR1P21817 5038 aa1.02□□□□□ -2.25
ATRX-205ENST00000479487 MT2AP02795 61 aa1□□□□□ -2.25
ATRX-205ENST00000479487 MT1FP04733 61 aa1□□□□□ -2.25
ATRX-205ENST00000479487 MT1BP07438 61 aa1□□□□□ -2.25
ATRX-205ENST00000479487 KRTAP19-5Q3LI72 72 aa0.99□□□□□ -2.25
ATRX-205ENST00000479487 RYR3Q15413 4870 aa0.98□□□□□ -2.25
ATRX-205ENST00000479487 MT1HP80294 61 aa0.97□□□□□ -2.25
ATRX-205ENST00000479487 BIRC6Q9NR09 4857 aa0.97□□□□□ -2.25
ATRX-205ENST00000479487 HERC2O95714 4834 aa0.96□□□□□ -2.26
ATRX-205ENST00000479487 FCGBPQ9Y6R7 5405 aaPredicted RBP0.96□□□□□ -2.26
ATRX-205ENST00000479487 KIAA1109Q2LD37 5005 aa0.96□□□□□ -2.26
ATRX-205ENST00000479487 HMCN2Q8NDA2 5059 aa0.93□□□□□ -2.26
ATRX-205ENST00000479487 MT1LQ93083 61 aa0.92□□□□□ -2.26
ATRX-205ENST00000479487 KRTAP19-7Q3SYF9 63 aa0.91□□□□□ -2.26
ATRX-205ENST00000479487 MT1EP04732 61 aa0.9□□□□□ -2.27
ATRX-205ENST00000479487 ABCA13Q86UQ4 5058 aa0.88□□□□□ -2.27
ATRX-205ENST00000479487 PCLOQ9Y6V0 5065 aa0.88□□□□□ -2.27
ATRX-205ENST00000479487 MT1AP04731 61 aa0.86□□□□□ -2.27
ATRX-205ENST00000479487 PRM1P04553 51 aa0.85□□□□□ -2.27
ATRX-205ENST00000479487 UBR4Q5T4S7 5183 aa0.84□□□□□ -2.28
ATRX-205ENST00000479487 EPPK1P58107 5090 aaKnown RBP0.83□□□□□ -2.28
ATRX-205ENST00000479487 MUC2Q02817 5179 aa0.83□□□□□ -2.28
ATRX-205ENST00000479487 FAT4Q6V0I7 4981 aa0.82□□□□□ -2.28
ATRX-205ENST00000479487 MT1GP13640 62 aa0.82□□□□□ -2.28
ATRX-205ENST00000479487 MT1MQ8N339 61 aa0.82□□□□□ -2.28
ATRX-205ENST00000479487 KRTAP19-3Q7Z4W3 81 aa0.81□□□□□ -2.28
ATRX-205ENST00000479487 SPRR2FQ96RM1 72 aa0.8□□□□□ -2.28
ATRX-205ENST00000479487 KRTAP6-2Q3LI66 62 aa0.78□□□□□ -2.28
ATRX-205ENST00000479487 SYNE1Q8NF91 8797 aaKnown RBP0.77□□□□□ -2.29
ATRX-205ENST00000479487 SPRR2AP35326 72 aa0.77□□□□□ -2.29
ATRX-205ENST00000479487 KRTAP6-1Q3LI64 71 aa0.75□□□□□ -2.29
ATRX-205ENST00000479487 SPRR2BP35325 72 aa0.74□□□□□ -2.29
ATRX-205ENST00000479487 KRTAP19-6Q3LI70 58 aa0.74□□□□□ -2.29
ATRX-205ENST00000479487 SPRR2EP22531 72 aa0.73□□□□□ -2.29
ATRX-205ENST00000479487 RNF213Q63HN8 5207 aa0.72□□□□□ -2.29
ATRX-205ENST00000479487 SSPOA2VEC9 5147 aa0.71□□□□□ -2.3
ATRX-205ENST00000479487 SPRR2DP22532 72 aa0.71□□□□□ -2.3
ATRX-205ENST00000479487 KMT2DO14686 5537 aa0.69□□□□□ -2.3
ATRX-205ENST00000479487 AHNAK2Q8IVF2 5795 aa0.66□□□□□ -2.3
ATRX-205ENST00000479487 USH2AO75445 5202 aa0.64□□□□□ -2.31
ATRX-205ENST00000479487 KRTAP5-10Q6L8G5 202 aa0.63□□□□□ -2.31
ATRX-205ENST00000479487 MUC12Q9UKN1 5478 aa0.59□□□□□ -2.32
ATRX-205ENST00000479487 SYNE2Q8WXH0 6885 aaKnown RBP0.58□□□□□ -2.32
ATRX-205ENST00000479487 MUC16Q8WXI7 14507 aa0.58□□□□□ -2.32
ATRX-205ENST00000479487 KRTAP21-1Q3LI58 79 aa0.57□□□□□ -2.32
ATRX-205ENST00000479487 DSTQ03001 7570 aaKnown RBP0.56□□□□□ -2.32
ATRX-205ENST00000479487 MDN1Q9NU22 5596 aa0.54□□□□□ -2.32
ATRX-205ENST00000479487 MUC5ACP98088 5654 aa0.52□□□□□ -2.33
ATRX-205ENST00000479487 KRTAP20-2Q3LI61 65 aa0.51□□□□□ -2.33
ATRX-205ENST00000479487 FSIP2Q5CZC0 6907 aa0.51□□□□□ -2.33
ATRX-205ENST00000479487 MACF1Q9UPN3 7388 aaKnown RBP0.51□□□□□ -2.33
ATRX-205ENST00000479487 MT4P47944 62 aa0.47□□□□□ -2.33
ATRX-205ENST00000479487 KRTAP20-1Q3LI63 56 aa0.47□□□□□ -2.33
ATRX-205ENST00000479487 NEBP20929 6669 aa0.41□□□□□ -2.34
ATRX-205ENST00000479487 MUC5BQ9HC84 5762 aaPredicted RBP0.4□□□□□ -2.34
ATRX-205ENST00000479487 AHNAKQ09666 5890 aaKnown RBP0.37□□□□□ -2.35
ATRX-205ENST00000479487 PHGR1C9JFL3 82 aa0.35□□□□□ -2.35
ATRX-205ENST00000479487 GPR98Q8WXG9 6306 aa0.2□□□□□ -2.38
Retrieved 78 of 20,778 RNA–protein pairs in 97.8 ms