RNA–Protein interactions for RNA: ENST00000479397.2

CNOT10-215, Transcript of CCR4-NOT transcription complex subunit 10, humanhuman

TSL 5

Gene CNOT10, Length 474 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT10-215ENST00000479397 NDUFAF8A1L188 74 aa1.98□□□□□ -2.09
CNOT10-215ENST00000479397 SMIM20Q8N5G0 67 aa1.98□□□□□ -2.09
CNOT10-215ENST00000479397 DMAC1Q96GE9 116 aa1.98□□□□□ -2.09
CNOT10-215ENST00000479397 KRTAP20-2Q3LI61 65 aa1.97□□□□□ -2.09
CNOT10-215ENST00000479397 MUC5ACP98088 5654 aa1.96□□□□□ -2.1
CNOT10-215ENST00000479397 LCE3EQ5T5B0 92 aa1.96□□□□□ -2.1
CNOT10-215ENST00000479397 MT1MQ8N339 61 aa1.95□□□□□ -2.1
CNOT10-215ENST00000479397 SERP2Q8N6R1 65 aa1.95□□□□□ -2.1
CNOT10-215ENST00000479397 SNURFQ9Y675 71 aa1.95□□□□□ -2.1
CNOT10-215ENST00000479397 ACYP2P14621 99 aa1.94□□□□□ -2.1
CNOT10-215ENST00000479397 MUC5BQ9HC84 5762 aaPredicted RBP1.93□□□□□ -2.1
CNOT10-215ENST00000479397 PRAC1Q96KF2 57 aa1.93□□□□□ -2.1
CNOT10-215ENST00000479397 COX7CP15954 63 aa1.91□□□□□ -2.1
CNOT10-215ENST00000479397 CHKB-CPT1BH3BT56 60 aa1.9□□□□□ -2.11
CNOT10-215ENST00000479397 SPANXA2-OT1Q8N9U9 137 aa1.9□□□□□ -2.11
CNOT10-215ENST00000479397 KRTAP12-4P60329 112 aa1.89□□□□□ -2.11
CNOT10-215ENST00000479397 SPTSSBQ8NFR3 76 aa1.89□□□□□ -2.11
CNOT10-215ENST00000479397 ANAPC13Q9BS18 74 aa1.89□□□□□ -2.11
CNOT10-215ENST00000479397 KRTAP4-3Q9BYR4 195 aa1.89□□□□□ -2.11
CNOT10-215ENST00000479397 OBSCNQ5VST9 7968 aa1.88□□□□□ -2.11
CNOT10-215ENST00000479397 H7BZZ5 65 aa1.88□□□□□ -2.11
CNOT10-215ENST00000479397 LCE3AQ5TA76 89 aa1.88□□□□□ -2.11
CNOT10-215ENST00000479397 CCDC179H3BU77 68 aa1.87□□□□□ -2.11
CNOT10-215ENST00000479397 KRTAP19-5Q3LI72 72 aa1.87□□□□□ -2.11
CNOT10-215ENST00000479397 KRTAP13-4Q3LI77 160 aa1.87□□□□□ -2.11
CNOT10-215ENST00000479397 KRTAP5-2Q701N4 177 aa1.87□□□□□ -2.11
CNOT10-215ENST00000479397 MT1LQ93083 61 aa1.86□□□□□ -2.11
CNOT10-215ENST00000479397 COA5Q86WW8 74 aa1.85□□□□□ -2.11
CNOT10-215ENST00000479397 KRTAP5-8O75690 187 aa1.84□□□□□ -2.11
CNOT10-215ENST00000479397 CAMK2N1Q7Z7J9 78 aa1.84□□□□□ -2.11
CNOT10-215ENST00000479397 A0A0D9SG42 100 aa1.83□□□□□ -2.12
CNOT10-215ENST00000479397 A8MU10 97 aa1.81□□□□□ -2.12
CNOT10-215ENST00000479397 SPATA8Q6RVD6 105 aa1.81□□□□□ -2.12
CNOT10-215ENST00000479397 KRTAP5-5Q701N2 237 aaPredicted RBP1.81□□□□□ -2.12
CNOT10-215ENST00000479397 SYNE1Q8NF91 8797 aaKnown RBP1.8□□□□□ -2.12
CNOT10-215ENST00000479397 SEC61GP60059 68 aa1.79□□□□□ -2.12
CNOT10-215ENST00000479397 SERP1Q9Y6X1 66 aa1.79□□□□□ -2.12
CNOT10-215ENST00000479397 A0A1B0GU33 70 aa1.78□□□□□ -2.12
CNOT10-215ENST00000479397 ATP5EP56381 51 aaPredicted RBP1.78□□□□□ -2.12
CNOT10-215ENST00000479397 TMEM258P61165 79 aa1.78□□□□□ -2.12
CNOT10-215ENST00000479397 SPINT4Q6UDR6 99 aa1.78□□□□□ -2.12
CNOT10-215ENST00000479397 KRTAP12-1P59990 96 aa1.76□□□□□ -2.13
CNOT10-215ENST00000479397 A0A1B0GU69 56 aa1.75□□□□□ -2.13
CNOT10-215ENST00000479397 SMIM26A0A096LP01 95 aa1.72□□□□□ -2.13
CNOT10-215ENST00000479397 C10orf95Q9H7T3 257 aa1.72□□□□□ -2.13
CNOT10-215ENST00000479397 LINC01558Q9Y6Z2 57 aa1.72□□□□□ -2.13
CNOT10-215ENST00000479397 PRR15LQ9BU68 103 aa1.7□□□□□ -2.14
CNOT10-215ENST00000479397 UQCR11O14957 56 aa1.66□□□□□ -2.14
CNOT10-215ENST00000479397 PSPHP1O15172 72 aa1.66□□□□□ -2.14
CNOT10-215ENST00000479397 Q1T7F1 81 aa1.66□□□□□ -2.14
CNOT10-215ENST00000479397 TNP1P09430 55 aa1.65□□□□□ -2.15
CNOT10-215ENST00000479397 V9GYY9 64 aa1.65□□□□□ -2.15
CNOT10-215ENST00000479397 RPS28P62857 69 aaKnown RBP1.64□□□□□ -2.15
CNOT10-215ENST00000479397 MIR22HGQ0VDD5 57 aa1.63□□□□□ -2.15
CNOT10-215ENST00000479397 LCE1CQ5T751 118 aa1.63□□□□□ -2.15
CNOT10-215ENST00000479397 LCE1BQ5T7P3 118 aa1.63□□□□□ -2.15
CNOT10-215ENST00000479397 KRTAP12-3P60328 96 aa1.62□□□□□ -2.15
CNOT10-215ENST00000479397 KRTAP6-2Q3LI66 62 aa1.6□□□□□ -2.15
CNOT10-215ENST00000479397 A6NED7 52 aa1.59□□□□□ -2.15
CNOT10-215ENST00000479397 MT1AP04731 61 aa1.59□□□□□ -2.15
CNOT10-215ENST00000479397 KRTAP6-1Q3LI64 71 aa1.59□□□□□ -2.15
CNOT10-215ENST00000479397 K7ERS5 55 aa1.56□□□□□ -2.16
CNOT10-215ENST00000479397 KRTAP25-1Q3LHN0 102 aa1.56□□□□□ -2.16
CNOT10-215ENST00000479397 LCE3DQ9BYE3 92 aa1.56□□□□□ -2.16
CNOT10-215ENST00000479397 CDC42SE1Q9NRR8 79 aa1.54□□□□□ -2.16
CNOT10-215ENST00000479397 ROMO1P60602 79 aa1.49□□□□□ -2.17
CNOT10-215ENST00000479397 BRK1Q8WUW1 75 aa1.46□□□□□ -2.18
CNOT10-215ENST00000479397 PMAIP1Q13794 54 aa1.37□□□□□ -2.19
CNOT10-215ENST00000479397 PHGR1C9JFL3 82 aa1.35□□□□□ -2.19
CNOT10-215ENST00000479397 PRO0628Q9UI54 55 aa1.33□□□□□ -2.2
CNOT10-215ENST00000479397 MUC19Q7Z5P9 8384 aa1.3□□□□□ -2.2
CNOT10-215ENST00000479397 KTN1-AS1Q86SY8 53 aa1.26□□□□□ -2.21
CNOT10-215ENST00000479397 KRTAP21-2Q3LI59 83 aa1.18□□□□□ -2.22
CNOT10-215ENST00000479397 LUZP6Q538Z0 58 aa1.06□□□□□ -2.24
CNOT10-215ENST00000479397 KRTAP21-1Q3LI58 79 aa1.04□□□□□ -2.24
CNOT10-215ENST00000479397 INE1O15225 51 aa0.8□□□□□ -2.28
CNOT10-215ENST00000479397 PRM1P04553 51 aa0.78□□□□□ -2.28
CNOT10-215ENST00000479397 MUC16Q8WXI7 14507 aa0.75□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 46.6 ms