RNA–Protein interactions for RNA: ENST00000478979.5

CCDC78-210, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,054 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-210ENST00000478979 MT1EP04732 61 aa4.83□□□□□ -1.64
CCDC78-210ENST00000478979 MT1LQ93083 61 aa4.83□□□□□ -1.64
CCDC78-210ENST00000478979 KRTAP4-3Q9BYR4 195 aa4.77□□□□□ -1.65
CCDC78-210ENST00000478979 KRTAP19-6Q3LI70 58 aa4.74□□□□□ -1.65
CCDC78-210ENST00000478979 CRCT1Q9UGL9 99 aa4.74□□□□□ -1.65
CCDC78-210ENST00000478979 LOC100996750A0A140TA64 210 aa4.73□□□□□ -1.65
CCDC78-210ENST00000478979 MT1GP13640 62 aa4.65□□□□□ -1.67
CCDC78-210ENST00000478979 LCE2DQ5TA82 110 aaPredicted RBP4.65□□□□□ -1.67
CCDC78-210ENST00000478979 MACF1Q9UPN3 7388 aaKnown RBP4.63□□□□□ -1.67
CCDC78-210ENST00000478979 KRTAP19-4Q3LI73 84 aa4.61□□□□□ -1.67
CCDC78-210ENST00000478979 SYNE2Q8WXH0 6885 aaKnown RBP4.56□□□□□ -1.68
CCDC78-210ENST00000478979 SPRR2FQ96RM1 72 aa4.55□□□□□ -1.68
CCDC78-210ENST00000478979 MT1MQ8N339 61 aa4.53□□□□□ -1.68
CCDC78-210ENST00000478979 KRTAP19-3Q7Z4W3 81 aa4.53□□□□□ -1.68
CCDC78-210ENST00000478979 SYNE1Q8NF91 8797 aaKnown RBP4.53□□□□□ -1.68
CCDC78-210ENST00000478979 KRTAP12-4P60329 112 aa4.52□□□□□ -1.69
CCDC78-210ENST00000478979 MDN1Q9NU22 5596 aa4.48□□□□□ -1.69
CCDC78-210ENST00000478979 LCE5AQ5TCM9 118 aa4.35□□□□□ -1.71
CCDC78-210ENST00000478979 OBSCNQ5VST9 7968 aa4.34□□□□□ -1.72
CCDC78-210ENST00000478979 LCE3BQ5TA77 95 aa4.32□□□□□ -1.72
CCDC78-210ENST00000478979 KRTAP4-9Q9BYQ8 210 aa4.27□□□□□ -1.73
CCDC78-210ENST00000478979 KRTAP9-2Q9BYQ4 174 aa4.24□□□□□ -1.73
CCDC78-210ENST00000478979 KRTAP6-1Q3LI64 71 aa4.16□□□□□ -1.74
CCDC78-210ENST00000478979 LCE1AQ5T7P2 110 aa4.13□□□□□ -1.75
CCDC78-210ENST00000478979 SPRR2EP22531 72 aa4.12□□□□□ -1.75
CCDC78-210ENST00000478979 SPRR2BP35325 72 aa4.12□□□□□ -1.75
CCDC78-210ENST00000478979 SPRR2AP35326 72 aa4.12□□□□□ -1.75
CCDC78-210ENST00000478979 KRTAP9-7A8MTY7 169 aa4.08□□□□□ -1.76
CCDC78-210ENST00000478979 PRM1P04553 51 aa4.07□□□□□ -1.76
CCDC78-210ENST00000478979 MT1AP04731 61 aa4.05□□□□□ -1.76
CCDC78-210ENST00000478979 KRTAP5-5Q701N2 237 aaPredicted RBP4.03□□□□□ -1.76
CCDC78-210ENST00000478979 LCE3DQ9BYE3 92 aa4.02□□□□□ -1.77
CCDC78-210ENST00000478979 LCE3EQ5T5B0 92 aa4.01□□□□□ -1.77
CCDC78-210ENST00000478979 KRTAP5-9P26371 169 aa3.99□□□□□ -1.77
CCDC78-210ENST00000478979 SPRR2DP22532 72 aa3.93□□□□□ -1.78
CCDC78-210ENST00000478979 KRTAP9-6A0A140TA67 174 aa3.85□□□□□ -1.79
CCDC78-210ENST00000478979 KRTAP6-3Q3LI67 103 aa3.83□□□□□ -1.8
CCDC78-210ENST00000478979 KRTAP6-2Q3LI66 62 aa3.8□□□□□ -1.8
CCDC78-210ENST00000478979 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.79□□□□□ -1.8
CCDC78-210ENST00000478979 KRTAP9-4Q9BYQ2 154 aa3.78□□□□□ -1.8
CCDC78-210ENST00000478979 KRTAP2-2Q9BYT5 123 aa3.67□□□□□ -1.82
CCDC78-210ENST00000478979 MT3P25713 68 aa3.62□□□□□ -1.83
CCDC78-210ENST00000478979 MT4P47944 62 aa3.59□□□□□ -1.83
CCDC78-210ENST00000478979 LCE1EQ5T753 118 aa3.59□□□□□ -1.84
CCDC78-210ENST00000478979 NEBP20929 6669 aa3.55□□□□□ -1.84
CCDC78-210ENST00000478979 KRTAP4-6Q9BYQ5 205 aa3.55□□□□□ -1.84
CCDC78-210ENST00000478979 KRTAP5-4Q6L8H1 288 aa3.42□□□□□ -1.86
CCDC78-210ENST00000478979 HMCN1Q96RW7 5635 aa3.4□□□□□ -1.86
CCDC78-210ENST00000478979 LCE1DQ5T752 114 aa3.4□□□□□ -1.87
CCDC78-210ENST00000478979 KRTAP20-2Q3LI61 65 aa3.33□□□□□ -1.88
CCDC78-210ENST00000478979 LCE4AQ5TA78 99 aa3.23□□□□□ -1.89
CCDC78-210ENST00000478979 MUC5ACP98088 5654 aa3.18□□□□□ -1.9
CCDC78-210ENST00000478979 KRTAP5-2Q701N4 177 aa3.18□□□□□ -1.9
CCDC78-210ENST00000478979 LCE1BQ5T7P3 118 aa3.13□□□□□ -1.91
CCDC78-210ENST00000478979 MUC19Q7Z5P9 8384 aa3.11□□□□□ -1.91
CCDC78-210ENST00000478979 KRTAP5-3Q6L8H2 238 aa3.11□□□□□ -1.91
CCDC78-210ENST00000478979 KRTAP20-1Q3LI63 56 aa3.08□□□□□ -1.92
CCDC78-210ENST00000478979 LCE1FQ5T754 118 aa3.08□□□□□ -1.92
CCDC78-210ENST00000478979 KRTAP4-11Q9BYQ6 195 aa3.05□□□□□ -1.92
CCDC78-210ENST00000478979 KRTAP5-10Q6L8G5 202 aa2.89□□□□□ -1.95
CCDC78-210ENST00000478979 KRTAP4-2Q9BYR5 136 aa2.82□□□□□ -1.96
CCDC78-210ENST00000478979 KRTAP5-1Q6L8H4 278 aa2.78□□□□□ -1.96
CCDC78-210ENST00000478979 LCE1CQ5T751 118 aa2.72□□□□□ -1.97
CCDC78-210ENST00000478979 AHNAK2Q8IVF2 5795 aa2.71□□□□□ -1.98
CCDC78-210ENST00000478979 MUC5BQ9HC84 5762 aaPredicted RBP2.64□□□□□ -1.99
CCDC78-210ENST00000478979 KRTAP4-4Q9BYR3 166 aa2.64□□□□□ -1.99
CCDC78-210ENST00000478979 KRTAP5-8O75690 187 aa2.62□□□□□ -1.99
CCDC78-210ENST00000478979 KRTAP9-9Q9BYP9 154 aa2.62□□□□□ -1.99
CCDC78-210ENST00000478979 KRTAP21-2Q3LI59 83 aa2.62□□□□□ -1.99
CCDC78-210ENST00000478979 KRTAP21-1Q3LI58 79 aa2.57□□□□□ -2
CCDC78-210ENST00000478979 KRTAP4-12Q9BQ66 201 aa2.52□□□□□ -2.01
CCDC78-210ENST00000478979 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.49□□□□□ -2.01
CCDC78-210ENST00000478979 GPR98Q8WXG9 6306 aa2.43□□□□□ -2.02
CCDC78-210ENST00000478979 KRTAP5-7Q6L8G8 165 aa2.41□□□□□ -2.02
CCDC78-210ENST00000478979 KRTAP5-11Q6L8G4 156 aa2.33□□□□□ -2.04
CCDC78-210ENST00000478979 PHGR1C9JFL3 82 aa2.05□□□□□ -2.08
CCDC78-210ENST00000478979 AHNAKQ09666 5890 aaKnown RBP1.98□□□□□ -2.09
CCDC78-210ENST00000478979 MUC16Q8WXI7 14507 aa1.39□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 101.7 ms