RNA–Protein interactions for RNA: ENST00000478743.1

HDAC8-217, Transcript of histone deacetylase 8, humanhuman

TSL 4

Gene HDAC8, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-217ENST00000478743 FAM240AA0A1B0GVK7 77 aa3.62□□□□□ -1.83
HDAC8-217ENST00000478743 KRTAP4-12Q9BQ66 201 aa3.62□□□□□ -1.83
HDAC8-217ENST00000478743 KRTAP9-4Q9BYQ2 154 aa3.62□□□□□ -1.83
HDAC8-217ENST00000478743 HIST1H4AP62805 103 aaKnown RBP3.6□□□□□ -1.83
HDAC8-217ENST00000478743 LINC00643Q86TS7 51 aa3.58□□□□□ -1.84
HDAC8-217ENST00000478743 MT1AP04731 61 aa3.57□□□□□ -1.84
HDAC8-217ENST00000478743 KRTAP12-3P60328 96 aa3.55□□□□□ -1.84
HDAC8-217ENST00000478743 ATP5EP2Q5VTU8 51 aa3.55□□□□□ -1.84
HDAC8-217ENST00000478743 KRTAP15-1Q3LI76 137 aa3.5□□□□□ -1.85
HDAC8-217ENST00000478743 SCGB1A1P11684 91 aa3.48□□□□□ -1.85
HDAC8-217ENST00000478743 SPINT4Q6UDR6 99 aa3.47□□□□□ -1.85
HDAC8-217ENST00000478743 TRAV7A0A075B6U4 112 aa3.45□□□□□ -1.86
HDAC8-217ENST00000478743 KRTAP12-1P59990 96 aa3.43□□□□□ -1.86
HDAC8-217ENST00000478743 OCR1Q9BZK8 76 aa3.41□□□□□ -1.86
HDAC8-217ENST00000478743 MP68P56378 58 aa3.37□□□□□ -1.87
HDAC8-217ENST00000478743 TNP1P09430 55 aa3.36□□□□□ -1.87
HDAC8-217ENST00000478743 SPATA8Q6RVD6 105 aa3.35□□□□□ -1.87
HDAC8-217ENST00000478743 SMIM20Q8N5G0 67 aa3.35□□□□□ -1.87
HDAC8-217ENST00000478743 SERP2Q8N6R1 65 aa3.35□□□□□ -1.87
HDAC8-217ENST00000478743 SPTSSBQ8NFR3 76 aa3.35□□□□□ -1.87
HDAC8-217ENST00000478743 ANAPC13Q9BS18 74 aa3.35□□□□□ -1.87
HDAC8-217ENST00000478743 SNURFQ9Y675 71 aa3.35□□□□□ -1.87
HDAC8-217ENST00000478743 COX7CP15954 63 aa3.31□□□□□ -1.88
HDAC8-217ENST00000478743 ACYP2P14621 99 aa3.3□□□□□ -1.88
HDAC8-217ENST00000478743 H3BPC8 53 aa3.29□□□□□ -1.88
HDAC8-217ENST00000478743 CCDC179H3BU77 68 aa3.29□□□□□ -1.88
HDAC8-217ENST00000478743 CHKB-CPT1BH3BT56 60 aa3.24□□□□□ -1.89
HDAC8-217ENST00000478743 MT3P25713 68 aa3.24□□□□□ -1.89
HDAC8-217ENST00000478743 KRTAP4-2Q9BYR5 136 aa3.22□□□□□ -1.89
HDAC8-217ENST00000478743 H7BZZ5 65 aa3.21□□□□□ -1.9
HDAC8-217ENST00000478743 LCE3CQ5T5A8 94 aa3.19□□□□□ -1.9
HDAC8-217ENST00000478743 KRTAP9-6A8MVA2 160 aa3.18□□□□□ -1.9
HDAC8-217ENST00000478743 SPANXA2-OT1Q8N9U9 137 aa3.17□□□□□ -1.9
HDAC8-217ENST00000478743 KRTAP25-1Q3LHN0 102 aa3.15□□□□□ -1.91
HDAC8-217ENST00000478743 LCE1EQ5T753 118 aa3.15□□□□□ -1.91
HDAC8-217ENST00000478743 LCE1BQ5T7P3 118 aa3.13□□□□□ -1.91
HDAC8-217ENST00000478743 COA5Q86WW8 74 aa3.13□□□□□ -1.91
HDAC8-217ENST00000478743 TMEM258P61165 79 aa3.11□□□□□ -1.91
HDAC8-217ENST00000478743 PRAC1Q96KF2 57 aa3.11□□□□□ -1.91
HDAC8-217ENST00000478743 A8MU10 97 aa3.1□□□□□ -1.91
HDAC8-217ENST00000478743 ATP5EP56381 51 aaPredicted RBP3.09□□□□□ -1.91
HDAC8-217ENST00000478743 PHGR1C9JFL3 82 aa3.06□□□□□ -1.92
HDAC8-217ENST00000478743 A0A1B0GU33 70 aa3.04□□□□□ -1.92
HDAC8-217ENST00000478743 SERP1Q9Y6X1 66 aa3.03□□□□□ -1.92
HDAC8-217ENST00000478743 KRTAP5-11Q6L8G4 156 aa3□□□□□ -1.93
HDAC8-217ENST00000478743 SEC61GP60059 68 aa2.98□□□□□ -1.93
HDAC8-217ENST00000478743 A0A1B0GU69 56 aa2.97□□□□□ -1.93
HDAC8-217ENST00000478743 LCE1CQ5T751 118 aa2.95□□□□□ -1.94
HDAC8-217ENST00000478743 PRR15LQ9BU68 103 aa2.94□□□□□ -1.94
HDAC8-217ENST00000478743 PSPHP1O15172 72 aa2.93□□□□□ -1.94
HDAC8-217ENST00000478743 LINC01558Q9Y6Z2 57 aa2.93□□□□□ -1.94
HDAC8-217ENST00000478743 SMIM26A0A096LP01 95 aa2.92□□□□□ -1.94
HDAC8-217ENST00000478743 RPS28P62857 69 aaKnown RBP2.91□□□□□ -1.94
HDAC8-217ENST00000478743 Q1T7F1 81 aa2.88□□□□□ -1.95
HDAC8-217ENST00000478743 V9GYY9 64 aa2.88□□□□□ -1.95
HDAC8-217ENST00000478743 NDUFAF8A1L188 74 aa2.83□□□□□ -1.96
HDAC8-217ENST00000478743 A6NED7 52 aa2.83□□□□□ -1.96
HDAC8-217ENST00000478743 UQCR11O14957 56 aa2.82□□□□□ -1.96
HDAC8-217ENST00000478743 MIR22HGQ0VDD5 57 aa2.81□□□□□ -1.96
HDAC8-217ENST00000478743 LCE1FQ5T754 118 aa2.8□□□□□ -1.96
HDAC8-217ENST00000478743 BRK1Q8WUW1 75 aa2.7□□□□□ -1.98
HDAC8-217ENST00000478743 CDC42SE1Q9NRR8 79 aa2.7□□□□□ -1.98
HDAC8-217ENST00000478743 K7ERS5 55 aa2.69□□□□□ -1.98
HDAC8-217ENST00000478743 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.59□□□□□ -1.99
HDAC8-217ENST00000478743 ROMO1P60602 79 aa2.56□□□□□ -2
HDAC8-217ENST00000478743 PMAIP1Q13794 54 aa2.53□□□□□ -2
HDAC8-217ENST00000478743 PRO0628Q9UI54 55 aa2.5□□□□□ -2.01
HDAC8-217ENST00000478743 MUC19Q7Z5P9 8384 aa2.49□□□□□ -2.01
HDAC8-217ENST00000478743 KRTAP21-2Q3LI59 83 aa2.41□□□□□ -2.02
HDAC8-217ENST00000478743 KRTAP4-4Q9BYR3 166 aa2.41□□□□□ -2.02
HDAC8-217ENST00000478743 KTN1-AS1Q86SY8 53 aa2.35□□□□□ -2.03
HDAC8-217ENST00000478743 KRTAP21-1Q3LI58 79 aa2.27□□□□□ -2.05
HDAC8-217ENST00000478743 LCE3EQ5T5B0 92 aa2.2□□□□□ -2.06
HDAC8-217ENST00000478743 LUZP6Q538Z0 58 aa2.12□□□□□ -2.07
HDAC8-217ENST00000478743 LCE3DQ9BYE3 92 aa2.09□□□□□ -2.07
HDAC8-217ENST00000478743 MUC16Q8WXI7 14507 aa1.74□□□□□ -2.13
HDAC8-217ENST00000478743 INE1O15225 51 aa1.44□□□□□ -2.18
HDAC8-217ENST00000478743 PRM1P04553 51 aa1.35□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 34 ms