RNA–Protein interactions for RNA: ENST00000478576.5

GFM1-208, Transcript of G elongation factor mitochondrial 1, humanhuman

TSL 2 BASIC

Gene GFM1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFM1-208ENST00000478576 MT1GP13640 62 aa5.32□□□□□ -1.56
GFM1-208ENST00000478576 KRTAP19-3Q7Z4W3 81 aa5.32□□□□□ -1.56
GFM1-208ENST00000478576 MT1MQ8N339 61 aa5.31□□□□□ -1.56
GFM1-208ENST00000478576 KRTAP4-3Q9BYR4 195 aa5.28□□□□□ -1.56
GFM1-208ENST00000478576 LOC100996750A0A140TA64 210 aa5.24□□□□□ -1.57
GFM1-208ENST00000478576 FSIP2Q5CZC0 6907 aa5.18□□□□□ -1.58
GFM1-208ENST00000478576 FCGBPQ9Y6R7 5405 aaPredicted RBP5.18□□□□□ -1.58
GFM1-208ENST00000478576 LCE5AQ5TCM9 118 aa5.16□□□□□ -1.58
GFM1-208ENST00000478576 SPRR2FQ96RM1 72 aa5.08□□□□□ -1.6
GFM1-208ENST00000478576 MUC12Q9UKN1 5478 aa5.08□□□□□ -1.6
GFM1-208ENST00000478576 CRCT1Q9UGL9 99 aa5.02□□□□□ -1.61
GFM1-208ENST00000478576 KRTAP12-4P60329 112 aa4.85□□□□□ -1.63
GFM1-208ENST00000478576 MACF1Q9UPN3 7388 aaKnown RBP4.84□□□□□ -1.63
GFM1-208ENST00000478576 KRTAP5-9P26371 169 aa4.83□□□□□ -1.64
GFM1-208ENST00000478576 MT1AP04731 61 aa4.8□□□□□ -1.64
GFM1-208ENST00000478576 LCE3BQ5TA77 95 aa4.8□□□□□ -1.64
GFM1-208ENST00000478576 LCE1AQ5T7P2 110 aa4.79□□□□□ -1.64
GFM1-208ENST00000478576 KRTAP6-1Q3LI64 71 aa4.78□□□□□ -1.64
GFM1-208ENST00000478576 DSTQ03001 7570 aaKnown RBP4.77□□□□□ -1.65
GFM1-208ENST00000478576 KRTAP9-2Q9BYQ4 174 aa4.74□□□□□ -1.65
GFM1-208ENST00000478576 KRTAP5-5Q701N2 237 aaPredicted RBP4.73□□□□□ -1.65
GFM1-208ENST00000478576 KRTAP4-9Q9BYQ8 210 aa4.67□□□□□ -1.66
GFM1-208ENST00000478576 SPRR2EP22531 72 aa4.64□□□□□ -1.67
GFM1-208ENST00000478576 SPRR2BP35325 72 aa4.64□□□□□ -1.67
GFM1-208ENST00000478576 SPRR2AP35326 72 aa4.64□□□□□ -1.67
GFM1-208ENST00000478576 SYNE2Q8WXH0 6885 aaKnown RBP4.61□□□□□ -1.67
GFM1-208ENST00000478576 LCE3DQ9BYE3 92 aa4.58□□□□□ -1.68
GFM1-208ENST00000478576 MDN1Q9NU22 5596 aa4.58□□□□□ -1.68
GFM1-208ENST00000478576 SYNE1Q8NF91 8797 aaKnown RBP4.54□□□□□ -1.68
GFM1-208ENST00000478576 LCE3EQ5T5B0 92 aa4.54□□□□□ -1.68
GFM1-208ENST00000478576 KRTAP9-4Q9BYQ2 154 aa4.51□□□□□ -1.69
GFM1-208ENST00000478576 SPRR2DP22532 72 aa4.45□□□□□ -1.7
GFM1-208ENST00000478576 KRTAP6-3Q3LI67 103 aa4.41□□□□□ -1.7
GFM1-208ENST00000478576 KRTAP9-7A8MTY7 169 aa4.31□□□□□ -1.72
GFM1-208ENST00000478576 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.31□□□□□ -1.72
GFM1-208ENST00000478576 MT3P25713 68 aa4.3□□□□□ -1.72
GFM1-208ENST00000478576 KRTAP6-2Q3LI66 62 aa4.28□□□□□ -1.72
GFM1-208ENST00000478576 PRM1P04553 51 aa4.27□□□□□ -1.73
GFM1-208ENST00000478576 KRTAP5-4Q6L8H1 288 aa4.2□□□□□ -1.74
GFM1-208ENST00000478576 KRTAP4-6Q9BYQ5 205 aa4.11□□□□□ -1.75
GFM1-208ENST00000478576 KRTAP9-6A0A140TA67 174 aa4.07□□□□□ -1.76
GFM1-208ENST00000478576 NEBP20929 6669 aa3.95□□□□□ -1.78
GFM1-208ENST00000478576 LCE4AQ5TA78 99 aa3.94□□□□□ -1.78
GFM1-208ENST00000478576 KRTAP5-2Q701N4 177 aa3.93□□□□□ -1.78
GFM1-208ENST00000478576 OBSCNQ5VST9 7968 aa3.91□□□□□ -1.78
GFM1-208ENST00000478576 KRTAP20-2Q3LI61 65 aa3.89□□□□□ -1.79
GFM1-208ENST00000478576 MT4P47944 62 aa3.86□□□□□ -1.79
GFM1-208ENST00000478576 KRTAP2-2Q9BYT5 123 aa3.77□□□□□ -1.81
GFM1-208ENST00000478576 KRTAP5-3Q6L8H2 238 aa3.74□□□□□ -1.81
GFM1-208ENST00000478576 KRTAP20-1Q3LI63 56 aa3.71□□□□□ -1.82
GFM1-208ENST00000478576 LCE1DQ5T752 114 aa3.68□□□□□ -1.82
GFM1-208ENST00000478576 KRTAP4-12Q9BQ66 201 aa3.65□□□□□ -1.82
GFM1-208ENST00000478576 HMCN1Q96RW7 5635 aa3.61□□□□□ -1.83
GFM1-208ENST00000478576 LCE1EQ5T753 118 aa3.58□□□□□ -1.84
GFM1-208ENST00000478576 KRTAP9-9Q9BYP9 154 aa3.53□□□□□ -1.84
GFM1-208ENST00000478576 MUC5ACP98088 5654 aa3.51□□□□□ -1.85
GFM1-208ENST00000478576 KRTAP5-10Q6L8G5 202 aa3.38□□□□□ -1.87
GFM1-208ENST00000478576 KRTAP5-1Q6L8H4 278 aa3.38□□□□□ -1.87
GFM1-208ENST00000478576 LCE1BQ5T7P3 118 aa3.38□□□□□ -1.87
GFM1-208ENST00000478576 LCE1CQ5T751 118 aa3.35□□□□□ -1.87
GFM1-208ENST00000478576 KRTAP4-2Q9BYR5 136 aa3.35□□□□□ -1.87
GFM1-208ENST00000478576 KRTAP4-11Q9BYQ6 195 aa3.21□□□□□ -1.9
GFM1-208ENST00000478576 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.2□□□□□ -1.9
GFM1-208ENST00000478576 KRTAP21-2Q3LI59 83 aa3.12□□□□□ -1.91
GFM1-208ENST00000478576 KRTAP5-7Q6L8G8 165 aa3.12□□□□□ -1.91
GFM1-208ENST00000478576 KRTAP5-8O75690 187 aa3.11□□□□□ -1.91
GFM1-208ENST00000478576 GPR98Q8WXG9 6306 aa3.08□□□□□ -1.92
GFM1-208ENST00000478576 KRTAP5-11Q6L8G4 156 aa2.9□□□□□ -1.95
GFM1-208ENST00000478576 AHNAK2Q8IVF2 5795 aa2.88□□□□□ -1.95
GFM1-208ENST00000478576 KRTAP21-1Q3LI58 79 aa2.74□□□□□ -1.97
GFM1-208ENST00000478576 KRTAP4-4Q9BYR3 166 aa2.74□□□□□ -1.97
GFM1-208ENST00000478576 MUC5BQ9HC84 5762 aaPredicted RBP2.61□□□□□ -1.99
GFM1-208ENST00000478576 LCE1FQ5T754 118 aa2.57□□□□□ -2
GFM1-208ENST00000478576 PHGR1C9JFL3 82 aa2.48□□□□□ -2.01
GFM1-208ENST00000478576 AHNAKQ09666 5890 aaKnown RBP2.48□□□□□ -2.01
GFM1-208ENST00000478576 MUC19Q7Z5P9 8384 aa2.45□□□□□ -2.02
GFM1-208ENST00000478576 MUC16Q8WXI7 14507 aa1.7□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 70.1 ms