RNA–Protein interactions for RNA: ENST00000478527.1

SDK1-207, Transcript of sidekick cell adhesion molecule 1, humanhuman

TSL 3

Gene SDK1, Length 494 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDK1-207ENST00000478527 MIR22HGQ0VDD5 57 aa5.53□□□□□ -1.52
SDK1-207ENST00000478527 KRTAP4-9Q9BYQ8 210 aa5.47□□□□□ -1.53
SDK1-207ENST00000478527 PSPHP1O15172 72 aa5.46□□□□□ -1.54
SDK1-207ENST00000478527 KRTAP12-3P60328 96 aa5.46□□□□□ -1.54
SDK1-207ENST00000478527 KRTAP4-3Q9BYR4 195 aa5.46□□□□□ -1.54
SDK1-207ENST00000478527 V9GYY9 64 aa5.46□□□□□ -1.54
SDK1-207ENST00000478527 Q1T7F1 81 aa5.43□□□□□ -1.54
SDK1-207ENST00000478527 KRTAP25-1Q3LHN0 102 aa5.42□□□□□ -1.54
SDK1-207ENST00000478527 K7ERS5 55 aa5.4□□□□□ -1.54
SDK1-207ENST00000478527 LCE1DQ5T752 114 aa5.39□□□□□ -1.55
SDK1-207ENST00000478527 GPR98Q8WXG9 6306 aa5.38□□□□□ -1.55
SDK1-207ENST00000478527 LCE4AQ5TA78 99 aa5.38□□□□□ -1.55
SDK1-207ENST00000478527 RPS28P62857 69 aaKnown RBP5.37□□□□□ -1.55
SDK1-207ENST00000478527 KRTAP4-7Q9BYR0 210 aa5.35□□□□□ -1.55
SDK1-207ENST00000478527 MT4P47944 62 aa5.32□□□□□ -1.56
SDK1-207ENST00000478527 KRTAP5-4Q6L8H1 288 aa5.31□□□□□ -1.56
SDK1-207ENST00000478527 A6NED7 52 aa5.28□□□□□ -1.56
SDK1-207ENST00000478527 HMCN1Q96RW7 5635 aa5.25□□□□□ -1.57
SDK1-207ENST00000478527 KRTAP23-1A1A580 65 aa5.19□□□□□ -1.58
SDK1-207ENST00000478527 KRTAP4-6Q9BYQ5 205 aa5.17□□□□□ -1.58
SDK1-207ENST00000478527 CDC42SE1Q9NRR8 79 aa5.15□□□□□ -1.59
SDK1-207ENST00000478527 KRTAP5-5Q701N2 237 aaPredicted RBP5.14□□□□□ -1.59
SDK1-207ENST00000478527 KRTAP15-1Q3LI76 137 aa5.11□□□□□ -1.59
SDK1-207ENST00000478527 KRTAP19-4Q3LI73 84 aa5.1□□□□□ -1.59
SDK1-207ENST00000478527 AHNAK2Q8IVF2 5795 aa5.06□□□□□ -1.6
SDK1-207ENST00000478527 LOC100996750A0A140TA64 210 aa5.06□□□□□ -1.6
SDK1-207ENST00000478527 ROMO1P60602 79 aa5.06□□□□□ -1.6
SDK1-207ENST00000478527 LCE3CQ5T5A8 94 aa5.02□□□□□ -1.61
SDK1-207ENST00000478527 KRTAP20-2Q3LI61 65 aa5.01□□□□□ -1.61
SDK1-207ENST00000478527 KRTAP5-10Q6L8G5 202 aa4.99□□□□□ -1.61
SDK1-207ENST00000478527 SPRR5A0A1B0GTR4 108 aa4.97□□□□□ -1.61
SDK1-207ENST00000478527 KRTAP12-4P60329 112 aa4.94□□□□□ -1.62
SDK1-207ENST00000478527 KRTAP5-7Q6L8G8 165 aa4.87□□□□□ -1.63
SDK1-207ENST00000478527 KRTAP5-3Q6L8H2 238 aa4.87□□□□□ -1.63
SDK1-207ENST00000478527 BRK1Q8WUW1 75 aa4.85□□□□□ -1.63
SDK1-207ENST00000478527 SYNE1Q8NF91 8797 aaKnown RBP4.85□□□□□ -1.63
SDK1-207ENST00000478527 MT1AP04731 61 aa4.8□□□□□ -1.64
SDK1-207ENST00000478527 PRO0628Q9UI54 55 aa4.8□□□□□ -1.64
SDK1-207ENST00000478527 KRTAP9-6A8MVA2 160 aa4.77□□□□□ -1.65
SDK1-207ENST00000478527 KRTAP6-1Q3LI64 71 aa4.76□□□□□ -1.65
SDK1-207ENST00000478527 KRTAP5-2Q701N4 177 aa4.68□□□□□ -1.66
SDK1-207ENST00000478527 KRTAP9-4Q9BYQ2 154 aa4.59□□□□□ -1.67
SDK1-207ENST00000478527 SVIPQ8NHG7 77 aa4.58□□□□□ -1.68
SDK1-207ENST00000478527 PMAIP1Q13794 54 aa4.57□□□□□ -1.68
SDK1-207ENST00000478527 KRTAP4-11Q9BYQ6 195 aa4.55□□□□□ -1.68
SDK1-207ENST00000478527 KRTAP6-2Q3LI66 62 aa4.53□□□□□ -1.68
SDK1-207ENST00000478527 KTN1-AS1Q86SY8 53 aa4.46□□□□□ -1.7
SDK1-207ENST00000478527 KRTAP5-8O75690 187 aa4.4□□□□□ -1.71
SDK1-207ENST00000478527 MT3P25713 68 aa4.35□□□□□ -1.71
SDK1-207ENST00000478527 PRAC1Q96KF2 57 aa4.3□□□□□ -1.72
SDK1-207ENST00000478527 OBSCNQ5VST9 7968 aa4.23□□□□□ -1.73
SDK1-207ENST00000478527 KRTAP5-1Q6L8H4 278 aa4.17□□□□□ -1.74
SDK1-207ENST00000478527 MUC5ACP98088 5654 aa4.16□□□□□ -1.74
SDK1-207ENST00000478527 KRTAP9-9Q9BYP9 154 aa4.14□□□□□ -1.75
SDK1-207ENST00000478527 MUC5BQ9HC84 5762 aaPredicted RBP4.14□□□□□ -1.75
SDK1-207ENST00000478527 AHNAKQ09666 5890 aaKnown RBP4.14□□□□□ -1.75
SDK1-207ENST00000478527 LCE1EQ5T753 118 aa3.98□□□□□ -1.77
SDK1-207ENST00000478527 KRTAP4-2Q9BYR5 136 aa3.8□□□□□ -1.8
SDK1-207ENST00000478527 LCE1BQ5T7P3 118 aa3.75□□□□□ -1.81
SDK1-207ENST00000478527 LCE1CQ5T751 118 aa3.7□□□□□ -1.82
SDK1-207ENST00000478527 LCE3DQ9BYE3 92 aa3.61□□□□□ -1.83
SDK1-207ENST00000478527 LUZP6Q538Z0 58 aa3.46□□□□□ -1.86
SDK1-207ENST00000478527 NDUFAF8A1L188 74 aa3.44□□□□□ -1.86
SDK1-207ENST00000478527 LCE3EQ5T5B0 92 aa3.41□□□□□ -1.86
SDK1-207ENST00000478527 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.4□□□□□ -1.87
SDK1-207ENST00000478527 KRTAP5-11Q6L8G4 156 aa3.39□□□□□ -1.87
SDK1-207ENST00000478527 KRTAP4-12Q9BQ66 201 aa3.39□□□□□ -1.87
SDK1-207ENST00000478527 LCE1FQ5T754 118 aa3.23□□□□□ -1.89
SDK1-207ENST00000478527 H3BS24 57 aa3.15□□□□□ -1.91
SDK1-207ENST00000478527 KRTAP21-2Q3LI59 83 aa3.13□□□□□ -1.91
SDK1-207ENST00000478527 A0A0A0MQY5 61 aa3.05□□□□□ -1.92
SDK1-207ENST00000478527 PHGR1C9JFL3 82 aa2.91□□□□□ -1.94
SDK1-207ENST00000478527 INE1O15225 51 aa2.87□□□□□ -1.95
SDK1-207ENST00000478527 KRTAP4-4Q9BYR3 166 aa2.85□□□□□ -1.95
SDK1-207ENST00000478527 MUC19Q7Z5P9 8384 aa2.62□□□□□ -1.99
SDK1-207ENST00000478527 PRM1P04553 51 aa2.61□□□□□ -1.99
SDK1-207ENST00000478527 KRTAP21-1Q3LI58 79 aa2.26□□□□□ -2.05
SDK1-207ENST00000478527 MUC16Q8WXI7 14507 aa1.85□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 68.9 ms