RNA–Protein interactions for RNA: ENST00000478254.5

GFM1-207, Transcript of G elongation factor mitochondrial 1, humanhuman

TSL 5

Gene GFM1, Length 3,470 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFM1-207ENST00000478254 LOC100996750A0A140TA64 210 aa3.87□□□□□ -1.79
GFM1-207ENST00000478254 KRTAP12-4P60329 112 aa3.85□□□□□ -1.79
GFM1-207ENST00000478254 KRTAP2-3P0C7H8 128 aa3.84□□□□□ -1.8
GFM1-207ENST00000478254 KRTAP2-4Q9BYR9 128 aa3.84□□□□□ -1.8
GFM1-207ENST00000478254 KRTAP2-1Q9BYU5 128 aa3.84□□□□□ -1.8
GFM1-207ENST00000478254 KRTAP4-3Q9BYR4 195 aa3.83□□□□□ -1.8
GFM1-207ENST00000478254 MT1GP13640 62 aa3.8□□□□□ -1.8
GFM1-207ENST00000478254 KRTAP19-7Q3SYF9 63 aa3.8□□□□□ -1.8
GFM1-207ENST00000478254 MUC12Q9UKN1 5478 aa3.78□□□□□ -1.8
GFM1-207ENST00000478254 MT1LQ93083 61 aa3.75□□□□□ -1.81
GFM1-207ENST00000478254 LCE3BQ5TA77 95 aa3.69□□□□□ -1.82
GFM1-207ENST00000478254 KRTAP4-9Q9BYQ8 210 aa3.69□□□□□ -1.82
GFM1-207ENST00000478254 MT1EP04732 61 aa3.68□□□□□ -1.82
GFM1-207ENST00000478254 SSPOA2VEC9 5147 aa3.59□□□□□ -1.83
GFM1-207ENST00000478254 SYNE2Q8WXH0 6885 aaKnown RBP3.59□□□□□ -1.84
GFM1-207ENST00000478254 KRTAP19-4Q3LI73 84 aa3.5□□□□□ -1.85
GFM1-207ENST00000478254 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.46□□□□□ -1.86
GFM1-207ENST00000478254 PRM1P04553 51 aa3.46□□□□□ -1.86
GFM1-207ENST00000478254 KRTAP9-7A8MTY7 169 aa3.45□□□□□ -1.86
GFM1-207ENST00000478254 MT1MQ8N339 61 aa3.45□□□□□ -1.86
GFM1-207ENST00000478254 SPRR2FQ96RM1 72 aa3.42□□□□□ -1.86
GFM1-207ENST00000478254 KRTAP19-3Q7Z4W3 81 aa3.4□□□□□ -1.86
GFM1-207ENST00000478254 LCE3DQ9BYE3 92 aa3.4□□□□□ -1.87
GFM1-207ENST00000478254 LCE3EQ5T5B0 92 aa3.34□□□□□ -1.87
GFM1-207ENST00000478254 KRTAP6-3Q3LI67 103 aa3.33□□□□□ -1.88
GFM1-207ENST00000478254 KRTAP19-6Q3LI70 58 aa3.29□□□□□ -1.88
GFM1-207ENST00000478254 KRTAP6-1Q3LI64 71 aa3.28□□□□□ -1.88
GFM1-207ENST00000478254 MDN1Q9NU22 5596 aa3.24□□□□□ -1.89
GFM1-207ENST00000478254 MACF1Q9UPN3 7388 aaKnown RBP3.22□□□□□ -1.89
GFM1-207ENST00000478254 KRTAP5-5Q701N2 237 aaPredicted RBP3.17□□□□□ -1.9
GFM1-207ENST00000478254 KRTAP6-2Q3LI66 62 aa3.17□□□□□ -1.9
GFM1-207ENST00000478254 LCE5AQ5TCM9 118 aa3.13□□□□□ -1.91
GFM1-207ENST00000478254 KRTAP5-9P26371 169 aa3.13□□□□□ -1.91
GFM1-207ENST00000478254 MT1AP04731 61 aa3.1□□□□□ -1.91
GFM1-207ENST00000478254 NEBP20929 6669 aa3.07□□□□□ -1.92
GFM1-207ENST00000478254 KRTAP20-1Q3LI63 56 aa3.05□□□□□ -1.92
GFM1-207ENST00000478254 LCE1AQ5T7P2 110 aa3.04□□□□□ -1.92
GFM1-207ENST00000478254 SPRR2EP22531 72 aa2.96□□□□□ -1.94
GFM1-207ENST00000478254 SPRR2BP35325 72 aa2.96□□□□□ -1.94
GFM1-207ENST00000478254 SPRR2AP35326 72 aa2.96□□□□□ -1.94
GFM1-207ENST00000478254 KRTAP2-2Q9BYT5 123 aa2.94□□□□□ -1.94
GFM1-207ENST00000478254 LCE1EQ5T753 118 aa2.91□□□□□ -1.94
GFM1-207ENST00000478254 KRTAP9-4Q9BYQ2 154 aa2.87□□□□□ -1.95
GFM1-207ENST00000478254 MUC19Q7Z5P9 8384 aa2.86□□□□□ -1.95
GFM1-207ENST00000478254 MT3P25713 68 aa2.84□□□□□ -1.95
GFM1-207ENST00000478254 KRTAP4-6Q9BYQ5 205 aa2.81□□□□□ -1.96
GFM1-207ENST00000478254 SPRR2DP22532 72 aa2.79□□□□□ -1.96
GFM1-207ENST00000478254 LCE1DQ5T752 114 aa2.73□□□□□ -1.97
GFM1-207ENST00000478254 MT4P47944 62 aa2.68□□□□□ -1.98
GFM1-207ENST00000478254 KRTAP4-11Q9BYQ6 195 aa2.67□□□□□ -1.98
GFM1-207ENST00000478254 LCE1BQ5T7P3 118 aa2.62□□□□□ -1.99
GFM1-207ENST00000478254 KRTAP5-7Q6L8G8 165 aa2.59□□□□□ -1.99
GFM1-207ENST00000478254 LCE4AQ5TA78 99 aa2.55□□□□□ -2
GFM1-207ENST00000478254 KRTAP5-10Q6L8G5 202 aa2.53□□□□□ -2
GFM1-207ENST00000478254 MUC5ACP98088 5654 aa2.52□□□□□ -2.01
GFM1-207ENST00000478254 GPR98Q8WXG9 6306 aa2.51□□□□□ -2.01
GFM1-207ENST00000478254 KRTAP5-4Q6L8H1 288 aa2.51□□□□□ -2.01
GFM1-207ENST00000478254 KRTAP4-12Q9BQ66 201 aa2.45□□□□□ -2.02
GFM1-207ENST00000478254 KRTAP9-9Q9BYP9 154 aa2.41□□□□□ -2.02
GFM1-207ENST00000478254 AHNAK2Q8IVF2 5795 aa2.4□□□□□ -2.02
GFM1-207ENST00000478254 MUC5BQ9HC84 5762 aaPredicted RBP2.38□□□□□ -2.03
GFM1-207ENST00000478254 AHNAKQ09666 5890 aaKnown RBP2.34□□□□□ -2.03
GFM1-207ENST00000478254 HMCN1Q96RW7 5635 aa2.34□□□□□ -2.04
GFM1-207ENST00000478254 KRTAP20-2Q3LI61 65 aa2.3□□□□□ -2.04
GFM1-207ENST00000478254 KRTAP4-4Q9BYR3 166 aa2.27□□□□□ -2.05
GFM1-207ENST00000478254 KRTAP5-3Q6L8H2 238 aa2.27□□□□□ -2.05
GFM1-207ENST00000478254 LCE1FQ5T754 118 aa2.21□□□□□ -2.06
GFM1-207ENST00000478254 KRTAP4-2Q9BYR5 136 aa2.18□□□□□ -2.06
GFM1-207ENST00000478254 KRTAP5-2Q701N4 177 aa2.18□□□□□ -2.06
GFM1-207ENST00000478254 KRTAP5-8O75690 187 aa2.05□□□□□ -2.08
GFM1-207ENST00000478254 KRTAP5-1Q6L8H4 278 aa2.04□□□□□ -2.08
GFM1-207ENST00000478254 LCE1CQ5T751 118 aa1.96□□□□□ -2.1
GFM1-207ENST00000478254 KRTAP21-2Q3LI59 83 aa1.95□□□□□ -2.1
GFM1-207ENST00000478254 KRTAP21-1Q3LI58 79 aa1.91□□□□□ -2.1
GFM1-207ENST00000478254 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.76□□□□□ -2.13
GFM1-207ENST00000478254 KRTAP5-11Q6L8G4 156 aa1.67□□□□□ -2.14
GFM1-207ENST00000478254 PHGR1C9JFL3 82 aa1.41□□□□□ -2.18
GFM1-207ENST00000478254 MUC16Q8WXI7 14507 aa1.07□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 72 ms