RNA–Protein interactions for RNA: ENST00000478139.1

SYCP3-204, Transcript of synaptonemal complex protein 3, humanhuman

TSL 2

Gene SYCP3, Length 3,690 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP3-204ENST00000478139 KRTAP12-3P60328 96 aa2.9□□□□□ -1.95
SYCP3-204ENST00000478139 KRTAP4-8A0A0G2JLE6 195 aa2.88□□□□□ -1.95
SYCP3-204ENST00000478139 KRTAP6-3Q3LI67 103 aa2.88□□□□□ -1.95
SYCP3-204ENST00000478139 KRTAP2-2Q9BYT5 123 aa2.87□□□□□ -1.95
SYCP3-204ENST00000478139 FCGBPQ9Y6R7 5405 aaPredicted RBP2.86□□□□□ -1.95
SYCP3-204ENST00000478139 SSPOA2VEC9 5147 aa2.84□□□□□ -1.95
SYCP3-204ENST00000478139 SPRR2DP22532 72 aa2.83□□□□□ -1.96
SYCP3-204ENST00000478139 KRTAP19-5Q3LI72 72 aa2.82□□□□□ -1.96
SYCP3-204ENST00000478139 KMT2DO14686 5537 aa2.81□□□□□ -1.96
SYCP3-204ENST00000478139 KRTAP9-4Q9BYQ2 154 aa2.8□□□□□ -1.96
SYCP3-204ENST00000478139 KRTAP4-12Q9BQ66 201 aa2.76□□□□□ -1.97
SYCP3-204ENST00000478139 KRTAP9-9Q9BYP9 154 aa2.76□□□□□ -1.97
SYCP3-204ENST00000478139 LCE1FQ5T754 118 aa2.75□□□□□ -1.97
SYCP3-204ENST00000478139 MACF1Q9UPN3 7388 aaKnown RBP2.74□□□□□ -1.97
SYCP3-204ENST00000478139 KRTAP20-1Q3LI63 56 aa2.73□□□□□ -1.97
SYCP3-204ENST00000478139 SYNE2Q8WXH0 6885 aaKnown RBP2.72□□□□□ -1.97
SYCP3-204ENST00000478139 MT1GP13640 62 aa2.72□□□□□ -1.97
SYCP3-204ENST00000478139 KRTAP19-4Q3LI73 84 aa2.72□□□□□ -1.97
SYCP3-204ENST00000478139 LCE3CQ5T5A8 94 aa2.71□□□□□ -1.98
SYCP3-204ENST00000478139 KRTAP19-3Q7Z4W3 81 aa2.71□□□□□ -1.98
SYCP3-204ENST00000478139 MT1EP04732 61 aa2.69□□□□□ -1.98
SYCP3-204ENST00000478139 KRTAP9-6A8MVA2 160 aa2.67□□□□□ -1.98
SYCP3-204ENST00000478139 KRTAP2-3P0C7H8 128 aa2.66□□□□□ -1.98
SYCP3-204ENST00000478139 LCE1DQ5T752 114 aa2.66□□□□□ -1.98
SYCP3-204ENST00000478139 KRTAP2-4Q9BYR9 128 aa2.66□□□□□ -1.98
SYCP3-204ENST00000478139 LCE1AQ5T7P2 110 aa2.66□□□□□ -1.98
SYCP3-204ENST00000478139 KRTAP4-7Q9BYR0 210 aa2.65□□□□□ -1.98
SYCP3-204ENST00000478139 KRTAP5-9P26371 169 aa2.64□□□□□ -1.99
SYCP3-204ENST00000478139 KRTAP19-7Q3SYF9 63 aa2.63□□□□□ -1.99
SYCP3-204ENST00000478139 MT1LQ93083 61 aa2.62□□□□□ -1.99
SYCP3-204ENST00000478139 LCE1EQ5T753 118 aa2.6□□□□□ -1.99
SYCP3-204ENST00000478139 KRTAP2-1Q9BYU5 128 aa2.59□□□□□ -1.99
SYCP3-204ENST00000478139 MT1MQ8N339 61 aa2.58□□□□□ -2
SYCP3-204ENST00000478139 LCE4AQ5TA78 99 aa2.56□□□□□ -2
SYCP3-204ENST00000478139 KRTAP4-9Q9BYQ8 210 aa2.56□□□□□ -2
SYCP3-204ENST00000478139 MUC12Q9UKN1 5478 aa2.53□□□□□ -2
SYCP3-204ENST00000478139 KRTAP4-2Q9BYR5 136 aa2.53□□□□□ -2.01
SYCP3-204ENST00000478139 NEBP20929 6669 aa2.52□□□□□ -2.01
SYCP3-204ENST00000478139 KRTAP12-4P60329 112 aa2.52□□□□□ -2.01
SYCP3-204ENST00000478139 MDN1Q9NU22 5596 aa2.52□□□□□ -2.01
SYCP3-204ENST00000478139 MT4P47944 62 aa2.49□□□□□ -2.01
SYCP3-204ENST00000478139 KRTAP4-3Q9BYR4 195 aa2.48□□□□□ -2.01
SYCP3-204ENST00000478139 DSTQ03001 7570 aaKnown RBP2.48□□□□□ -2.01
SYCP3-204ENST00000478139 KRTAP4-11Q9BYQ6 195 aa2.46□□□□□ -2.02
SYCP3-204ENST00000478139 SYNE1Q8NF91 8797 aaKnown RBP2.43□□□□□ -2.02
SYCP3-204ENST00000478139 LCE3EQ5T5B0 92 aa2.39□□□□□ -2.03
SYCP3-204ENST00000478139 MT3P25713 68 aa2.39□□□□□ -2.03
SYCP3-204ENST00000478139 KRTAP5-3Q6L8H2 238 aa2.36□□□□□ -2.03
SYCP3-204ENST00000478139 MT1AP04731 61 aa2.29□□□□□ -2.04
SYCP3-204ENST00000478139 OBSCNQ5VST9 7968 aa2.26□□□□□ -2.05
SYCP3-204ENST00000478139 LCE3DQ9BYE3 92 aa2.25□□□□□ -2.05
SYCP3-204ENST00000478139 GPR98Q8WXG9 6306 aa2.21□□□□□ -2.05
SYCP3-204ENST00000478139 KRTAP6-1Q3LI64 71 aa2.2□□□□□ -2.06
SYCP3-204ENST00000478139 MUC19Q7Z5P9 8384 aa2.18□□□□□ -2.06
SYCP3-204ENST00000478139 KRTAP20-2Q3LI61 65 aa2.14□□□□□ -2.07
SYCP3-204ENST00000478139 KRTAP6-2Q3LI66 62 aa2.13□□□□□ -2.07
SYCP3-204ENST00000478139 KRTAP5-4Q6L8H1 288 aa2.1□□□□□ -2.07
SYCP3-204ENST00000478139 HMCN1Q96RW7 5635 aa2.08□□□□□ -2.08
SYCP3-204ENST00000478139 PRM1P04553 51 aa2.07□□□□□ -2.08
SYCP3-204ENST00000478139 KRTAP5-5Q701N2 237 aaPredicted RBP2.07□□□□□ -2.08
SYCP3-204ENST00000478139 LCE1BQ5T7P3 118 aa2.01□□□□□ -2.09
SYCP3-204ENST00000478139 AHNAK2Q8IVF2 5795 aa1.89□□□□□ -2.11
SYCP3-204ENST00000478139 KRTAP5-2Q701N4 177 aa1.87□□□□□ -2.11
SYCP3-204ENST00000478139 KRTAP5-10Q6L8G5 202 aa1.82□□□□□ -2.12
SYCP3-204ENST00000478139 MUC5BQ9HC84 5762 aaPredicted RBP1.81□□□□□ -2.12
SYCP3-204ENST00000478139 MUC5ACP98088 5654 aa1.78□□□□□ -2.12
SYCP3-204ENST00000478139 KRTAP5-8O75690 187 aa1.78□□□□□ -2.12
SYCP3-204ENST00000478139 KRTAP5-7Q6L8G8 165 aa1.78□□□□□ -2.12
SYCP3-204ENST00000478139 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.68□□□□□ -2.14
SYCP3-204ENST00000478139 LCE1CQ5T751 118 aa1.67□□□□□ -2.14
SYCP3-204ENST00000478139 AHNAKQ09666 5890 aaKnown RBP1.65□□□□□ -2.14
SYCP3-204ENST00000478139 KRTAP5-11Q6L8G4 156 aa1.64□□□□□ -2.15
SYCP3-204ENST00000478139 KRTAP5-1Q6L8H4 278 aa1.63□□□□□ -2.15
SYCP3-204ENST00000478139 KRTAP21-1Q3LI58 79 aa1.45□□□□□ -2.18
SYCP3-204ENST00000478139 KRTAP4-4Q9BYR3 166 aa1.44□□□□□ -2.18
SYCP3-204ENST00000478139 KRTAP21-2Q3LI59 83 aa1.37□□□□□ -2.19
SYCP3-204ENST00000478139 PHGR1C9JFL3 82 aa1.32□□□□□ -2.2
SYCP3-204ENST00000478139 MUC16Q8WXI7 14507 aa0.85□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 39.4 ms