RNA–Protein interactions for RNA: ENST00000478089.1

FBXO42-204, Transcript of F-box protein 42, humanhuman

TSL 1 (best)

Gene FBXO42, Length 2,920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO42-204ENST00000478089 CRCT1Q9UGL9 99 aa2.98□□□□□ -1.93
FBXO42-204ENST00000478089 RNF213Q63HN8 5207 aa2.97□□□□□ -1.93
FBXO42-204ENST00000478089 FAT4Q6V0I7 4981 aa2.97□□□□□ -1.93
FBXO42-204ENST00000478089 TNP1P09430 55 aa2.96□□□□□ -1.94
FBXO42-204ENST00000478089 KRTAP19-8Q3LI54 63 aa2.95□□□□□ -1.94
FBXO42-204ENST00000478089 KRTAP4-2Q9BYR5 136 aa2.93□□□□□ -1.94
FBXO42-204ENST00000478089 LCE3DQ9BYE3 92 aa2.92□□□□□ -1.94
FBXO42-204ENST00000478089 KRTAP4-9Q9BYQ8 210 aa2.9□□□□□ -1.94
FBXO42-204ENST00000478089 KRTAP12-4P60329 112 aa2.9□□□□□ -1.95
FBXO42-204ENST00000478089 MT1BP07438 61 aa2.88□□□□□ -1.95
FBXO42-204ENST00000478089 MUC5BQ9HC84 5762 aaPredicted RBP2.86□□□□□ -1.95
FBXO42-204ENST00000478089 KRTAP4-11Q9BYQ6 195 aa2.85□□□□□ -1.95
FBXO42-204ENST00000478089 KRTAP10-5P60370 271 aa2.83□□□□□ -1.96
FBXO42-204ENST00000478089 GPR98Q8WXG9 6306 aa2.83□□□□□ -1.96
FBXO42-204ENST00000478089 MT1XP80297 61 aa2.83□□□□□ -1.96
FBXO42-204ENST00000478089 KRTAP19-6Q3LI70 58 aa2.82□□□□□ -1.96
FBXO42-204ENST00000478089 LCE3AQ5TA76 89 aa2.79□□□□□ -1.96
FBXO42-204ENST00000478089 KRTAP8-1Q8IUC2 63 aa2.77□□□□□ -1.97
FBXO42-204ENST00000478089 SSPOA2VEC9 5147 aa2.71□□□□□ -1.98
FBXO42-204ENST00000478089 KRTAP12-3P60328 96 aa2.68□□□□□ -1.98
FBXO42-204ENST00000478089 KRTAP2-3P0C7H8 128 aa2.66□□□□□ -1.98
FBXO42-204ENST00000478089 KRTAP2-4Q9BYR9 128 aa2.66□□□□□ -1.98
FBXO42-204ENST00000478089 KRTAP2-1Q9BYU5 128 aa2.66□□□□□ -1.98
FBXO42-204ENST00000478089 KRTAP5-9P26371 169 aa2.65□□□□□ -1.99
FBXO42-204ENST00000478089 KRTAP5-3Q6L8H2 238 aa2.6□□□□□ -1.99
FBXO42-204ENST00000478089 KRTAP19-5Q3LI72 72 aa2.59□□□□□ -1.99
FBXO42-204ENST00000478089 USH2AO75445 5202 aa2.55□□□□□ -2
FBXO42-204ENST00000478089 FSIP2Q5CZC0 6907 aa2.54□□□□□ -2
FBXO42-204ENST00000478089 KRTAP19-7Q3SYF9 63 aa2.52□□□□□ -2.01
FBXO42-204ENST00000478089 KRTAP20-1Q3LI63 56 aa2.49□□□□□ -2.01
FBXO42-204ENST00000478089 MT1EP04732 61 aa2.47□□□□□ -2.01
FBXO42-204ENST00000478089 MT1LQ93083 61 aa2.45□□□□□ -2.02
FBXO42-204ENST00000478089 NEBP20929 6669 aa2.43□□□□□ -2.02
FBXO42-204ENST00000478089 KMT2DO14686 5537 aa2.43□□□□□ -2.02
FBXO42-204ENST00000478089 KRTAP9-6A8MVA2 160 aa2.4□□□□□ -2.03
FBXO42-204ENST00000478089 FCGBPQ9Y6R7 5405 aaPredicted RBP2.36□□□□□ -2.03
FBXO42-204ENST00000478089 PRM1P04553 51 aa2.35□□□□□ -2.03
FBXO42-204ENST00000478089 KRTAP19-3Q7Z4W3 81 aa2.33□□□□□ -2.04
FBXO42-204ENST00000478089 MT1GP13640 62 aa2.33□□□□□ -2.04
FBXO42-204ENST00000478089 MT1MQ8N339 61 aa2.31□□□□□ -2.04
FBXO42-204ENST00000478089 SYNE2Q8WXH0 6885 aaKnown RBP2.3□□□□□ -2.04
FBXO42-204ENST00000478089 AHNAKQ09666 5890 aaKnown RBP2.3□□□□□ -2.04
FBXO42-204ENST00000478089 KRTAP4-3Q9BYR4 195 aa2.27□□□□□ -2.05
FBXO42-204ENST00000478089 SPRR2FQ96RM1 72 aa2.26□□□□□ -2.05
FBXO42-204ENST00000478089 SPRR2EP22531 72 aa2.2□□□□□ -2.06
FBXO42-204ENST00000478089 SPRR2BP35325 72 aa2.2□□□□□ -2.06
FBXO42-204ENST00000478089 SPRR2AP35326 72 aa2.2□□□□□ -2.06
FBXO42-204ENST00000478089 MACF1Q9UPN3 7388 aaKnown RBP2.19□□□□□ -2.06
FBXO42-204ENST00000478089 SPRR2DP22532 72 aa2.17□□□□□ -2.06
FBXO42-204ENST00000478089 KRTAP5-5Q701N2 237 aaPredicted RBP2.17□□□□□ -2.06
FBXO42-204ENST00000478089 MUC12Q9UKN1 5478 aa2.16□□□□□ -2.06
FBXO42-204ENST00000478089 KRTAP5-4Q6L8H1 288 aa2.15□□□□□ -2.06
FBXO42-204ENST00000478089 KRTAP5-7Q6L8G8 165 aa2.12□□□□□ -2.07
FBXO42-204ENST00000478089 SYNE1Q8NF91 8797 aaKnown RBP2.09□□□□□ -2.08
FBXO42-204ENST00000478089 MT1AP04731 61 aa2.08□□□□□ -2.08
FBXO42-204ENST00000478089 KRTAP6-1Q3LI64 71 aa2.05□□□□□ -2.08
FBXO42-204ENST00000478089 LCE1CQ5T751 118 aa2.04□□□□□ -2.08
FBXO42-204ENST00000478089 LCE1BQ5T7P3 118 aa2.04□□□□□ -2.08
FBXO42-204ENST00000478089 DSTQ03001 7570 aaKnown RBP2.04□□□□□ -2.08
FBXO42-204ENST00000478089 KRTAP5-10Q6L8G5 202 aa2.04□□□□□ -2.08
FBXO42-204ENST00000478089 KRTAP5-11Q6L8G4 156 aa2.01□□□□□ -2.09
FBXO42-204ENST00000478089 AHNAK2Q8IVF2 5795 aa2.01□□□□□ -2.09
FBXO42-204ENST00000478089 OBSCNQ5VST9 7968 aa2□□□□□ -2.09
FBXO42-204ENST00000478089 KRTAP4-4Q9BYR3 166 aa1.98□□□□□ -2.09
FBXO42-204ENST00000478089 MDN1Q9NU22 5596 aa1.98□□□□□ -2.09
FBXO42-204ENST00000478089 KRTAP6-2Q3LI66 62 aa1.94□□□□□ -2.1
FBXO42-204ENST00000478089 KRTAP5-2Q701N4 177 aa1.89□□□□□ -2.11
FBXO42-204ENST00000478089 MUC19Q7Z5P9 8384 aa1.86□□□□□ -2.11
FBXO42-204ENST00000478089 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.85□□□□□ -2.11
FBXO42-204ENST00000478089 KRTAP20-2Q3LI61 65 aa1.84□□□□□ -2.11
FBXO42-204ENST00000478089 KRTAP5-8O75690 187 aa1.8□□□□□ -2.12
FBXO42-204ENST00000478089 KRTAP5-1Q6L8H4 278 aa1.78□□□□□ -2.12
FBXO42-204ENST00000478089 MT4P47944 62 aa1.74□□□□□ -2.13
FBXO42-204ENST00000478089 KRTAP21-1Q3LI58 79 aa1.67□□□□□ -2.14
FBXO42-204ENST00000478089 MUC5ACP98088 5654 aa1.66□□□□□ -2.14
FBXO42-204ENST00000478089 KRTAP21-2Q3LI59 83 aa1.35□□□□□ -2.19
FBXO42-204ENST00000478089 PHGR1C9JFL3 82 aa1.15□□□□□ -2.23
FBXO42-204ENST00000478089 MUC16Q8WXI7 14507 aa0.86□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 9.4 ms